Symbol:
Foxa3
Name:
forkhead box A3
RGD ID:
18914784
Description:
ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of hepatocyte differentiation (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Prostatic Neoplasms (ortholog); FOUND IN actin cytoskeleton (inferred); nucleoplasm (inferred); nucleus (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
Hepatocyte nuclear factor 3-gamma
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - PID (archival)
Foxa3 (Heterocephalus glaber - naked mole-rat)
FOXA3 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 45,864,326 - 45,873,797 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 45,863,989 - 45,873,797 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 19 46,367,584 - 46,377,055 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 19 51,059,358 - 51,068,895 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 19 43,172,554 - 43,182,091 (+) NCBI Celera Cytogenetic Map 19 q13.32 NCBI HuRef 19 42,796,032 - 42,805,584 (+) NCBI HuRef CHM1_1 19 46,369,977 - 46,379,501 (+) NCBI CHM1_1 T2T-CHM13v2.0 19 48,691,764 - 48,701,238 (+) NCBI T2T-CHM13v2.0
Foxa3 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 18,747,208 - 18,757,464 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 18,747,209 - 18,757,463 (-) Ensembl GRCm39 Ensembl GRCm38 7 19,013,283 - 19,023,539 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 19,013,284 - 19,023,538 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 7 19,598,632 - 19,608,888 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 7 18,171,805 - 18,182,061 (-) NCBI MGSCv36 mm8 Celera 7 16,424,993 - 16,435,230 (-) NCBI Celera Cytogenetic Map 7 A3 NCBI cM Map 7 9.46 NCBI
Foxa3 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 87,790,111 - 87,800,259 (-) NCBI GRCr8 mRatBN7.2 1 78,662,067 - 78,672,321 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 78,662,431 - 78,672,155 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 84,051,578 - 84,060,504 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 92,609,178 - 92,618,101 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 85,806,680 - 85,815,606 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 79,921,292 - 79,930,219 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 79,920,752 - 79,930,263 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 81,181,104 - 81,190,030 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 78,368,026 - 78,376,953 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 1 78,446,136 - 78,455,064 (-) NCBI Celera 1 73,128,615 - 73,137,542 (-) NCBI Celera Cytogenetic Map 1 q21 NCBI
Foxa3 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955574 293,344 - 302,002 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955574 293,344 - 301,955 (+) NCBI ChiLan1.0 ChiLan1.0
FOXA3 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 52,029,299 - 52,039,689 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 53,900,693 - 53,911,081 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 19 42,873,933 - 42,883,479 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 19 51,410,294 - 51,419,483 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 19 51,410,473 - 51,418,744 (+) Ensembl panpan1.1 panPan2
FOXA3 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 109,749,142 - 109,757,149 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 109,748,926 - 109,757,006 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 109,234,450 - 109,242,454 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 110,281,914 - 110,289,921 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 1 110,281,781 - 110,290,035 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 1 109,957,939 - 109,965,942 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 109,592,626 - 109,600,628 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 110,461,391 - 110,469,396 (-) NCBI UU_Cfam_GSD_1.0
Foxa3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409349 17,849,096 - 17,856,150 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936706 2,196,468 - 2,203,113 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936706 2,196,530 - 2,202,924 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
FOXA3 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 52,181,114 - 52,188,774 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 52,181,095 - 52,188,777 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 47,444,473 - 47,452,404 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
FOXA3 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 6 39,309,439 - 39,320,102 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 6 39,310,108 - 39,320,095 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666073 18,951,536 - 18,962,292 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSHGLT00000027454 ⟹ ENSHGLP00000027213
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624832 7,338,478 - 7,350,658 (-) Ensembl
RefSeq Acc Id:
XM_004867126 ⟹ XP_004867183
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624832 7,339,612 - 7,350,651 (-) NCBI
RefSeq Acc Id:
XP_004867183 ⟸ XM_004867126
- UniProtKB:
G5AUY3 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSHGLP00000027213 ⟸ ENSHGLT00000027454