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Gene: Ect2l (epithelial cell transforming 2 like) Heterocephalus glaber

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Symbol:

Ect2l

Name:

epithelial cell transforming 2 like

RGD ID:

18913706

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); ASSOCIATED WITH Familial Behcet-Like Autoinflammatory Syndrome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

epithelial cell transforming sequence 2 oncogene-like; epithelial cell-transforming sequence 2 oncogene-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	15,059,107 - 15,150,617 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	15,058,307 - 15,153,975 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ect2l	Naked Mole-Rat	Familial Behcet-Like Autoinflammatory Syndrome		ISO	ECT2L (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autoinflammatory syndrome more ...	ClinVar	PMID:25741868

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ect2l	Naked Mole-Rat	guanyl-nucleotide exchange factor activity	enables	IEA	InterPro:IPR000219	150520179		InterPro	GO_REF:0000002

PMID:22301074

Ect2l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	15,059,107 - 15,150,617 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	15,058,307 - 15,153,975 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

ECT2L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	138,796,087 - 138,904,070 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	138,795,911 - 138,904,070 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	139,117,224 - 139,225,207 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	139,176,002 - 139,266,900 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	6	139,857,349 - 139,965,590 (+)	NCBI		Celera
Cytogenetic Map	6	q24.1	NCBI
HuRef	6	136,678,549 - 136,786,853 (+)	NCBI		HuRef
CHM1_1	6	139,380,248 - 139,488,189 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	139,984,635 - 140,092,615 (+)	NCBI		T2T-CHM13v2.0

Ect2l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	18,004,123 - 18,086,575 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	18,004,651 - 18,086,638 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	18,128,375 - 18,210,827 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	18,128,903 - 18,210,890 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	17,848,828 - 17,921,159 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	17,848,828 - 17,921,159 (-)	NCBI		MGSCv36	mm8
Celera	10	18,027,165 - 18,098,726 (-)	NCBI		Celera
Cytogenetic Map	10	A3	NCBI
cM Map	10	7.47	NCBI

Ect2l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	14,594,726 - 14,677,321 (-)	NCBI		GRCr8
mRatBN7.2	1	12,775,705 - 12,857,538 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	12,778,922 - 12,855,449 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	1	13,301,918 - 13,372,928 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	13,302,256 - 13,341,952 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Celera	1	11,234,398 - 11,301,711 (-)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

Ect2l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	20,754,934 - 20,843,015 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955436	20,754,395 - 20,843,015 (-)	NCBI	ChiLan1.0	ChiLan1.0

ECT2L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	158,762,241 - 158,868,220 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	156,659,827 - 156,766,511 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	136,556,048 - 136,662,697 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	140,641,624 - 140,747,937 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	140,641,624 - 140,748,058 (+)	Ensembl	panpan1.1		panPan2

ECT2L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	31,069,668 - 31,140,358 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	31,069,732 - 31,139,325 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	31,937,114 - 32,015,831 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	31,223,419 - 31,303,208 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	31,232,949 - 31,300,641 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	31,110,418 - 31,179,588 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	30,982,991 - 31,061,831 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	31,292,668 - 31,372,882 (+)	NCBI		UU_Cfam_GSD_1.0

Ect2l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	126,111,158 - 126,199,922 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936560	5,906,220 - 5,978,849 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936560	5,906,173 - 5,979,080 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ECT2L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	25,566,954 - 25,644,277 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	25,566,955 - 25,644,289 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	28,702,374 - 28,779,562 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ECT2L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	34,489,321 - 34,594,872 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	34,491,222 - 34,576,744 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	6,660,068 - 6,768,969 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_021259336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021259347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002395475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002395476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01033962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AHKG01033963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AHKG01033964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AHKG01033965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSHGLT00000023438 ⟹ ENSHGLP00000023222

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624753	15,059,107 - 15,150,617 (-)	Ensembl

Ensembl Acc Id:

ENSHGLT00000023439 ⟹ ENSHGLP00000023223

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624753	15,059,432 - 15,139,404 (-)	Ensembl

Ensembl Acc Id:

ENSHGLT00000023440 ⟹ ENSHGLP00000023224

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624753	15,059,432 - 15,139,404 (-)	Ensembl

RefSeq Acc Id:

XM_021259336 ⟹ XP_021114995

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XM_021259337 ⟹ XP_021114996

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XM_021259338 ⟹ XP_021114997

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,975 (-)	NCBI

RefSeq Acc Id:

XM_021259339 ⟹ XP_021114998

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,975 (-)	NCBI

RefSeq Acc Id:

XM_021259340 ⟹ XP_021114999

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,975 (-)	NCBI

RefSeq Acc Id:

XM_021259341 ⟹ XP_021115000

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,975 (-)	NCBI

RefSeq Acc Id:

XM_021259342 ⟹ XP_021115001

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,975 (-)	NCBI

RefSeq Acc Id:

XM_021259343 ⟹ XP_021115002

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,014 - 15,153,975 (-)	NCBI

RefSeq Acc Id:

XM_021259344 ⟹ XP_021115003

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,069,016 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XM_021259345 ⟹ XP_021115004

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,058,307 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XM_021259346 ⟹ XP_021115005

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,058,307 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XM_021259347 ⟹ XP_021115006

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,058,307 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XR_002395475

Type:

NON-CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,061,642 - 15,153,705 (-)	NCBI

RefSeq Acc Id:

XR_002395476

Type:

NON-CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624753	15,070,150 - 15,153,705 (-)	NCBI


Protein RefSeqs	XP_021114995	(Get FASTA)	NCBI Sequence Viewer
	XP_021114996	(Get FASTA)	NCBI Sequence Viewer
	XP_021114997	(Get FASTA)	NCBI Sequence Viewer
	XP_021114998	(Get FASTA)	NCBI Sequence Viewer
	XP_021114999	(Get FASTA)	NCBI Sequence Viewer
	XP_021115000	(Get FASTA)	NCBI Sequence Viewer
	XP_021115001	(Get FASTA)	NCBI Sequence Viewer
	XP_021115002	(Get FASTA)	NCBI Sequence Viewer
	XP_021115003	(Get FASTA)	NCBI Sequence Viewer
	XP_021115004	(Get FASTA)	NCBI Sequence Viewer
	XP_021115005	(Get FASTA)	NCBI Sequence Viewer
	XP_021115006	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSHGLP00000023222

RefSeq Acc Id:	XP_021115006 ⟸ XM_021259347
- Peptide Label:	isoform X5
- UniProtKB:	A0AAX6SYX1 (UniProtKB/TrEMBL), G5AUD3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_021115005 ⟸ XM_021259346
- Peptide Label:	isoform X4
- UniProtKB:	A0AAX6T0K0 (UniProtKB/TrEMBL), G5AUD3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_021115004 ⟸ XM_021259345
- Peptide Label:	isoform X3
- UniProtKB:	A0AAX6T2Y9 (UniProtKB/TrEMBL), G5AUD3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_021115002 ⟸ XM_021259343
- Peptide Label:	isoform X1
- UniProtKB:	A0AAX6T4W5 (UniProtKB/TrEMBL), G5AUD3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_021115001 ⟸ XM_021259342
- Peptide Label:	isoform X1
- UniProtKB:	A0AAX6T4W5 (UniProtKB/TrEMBL), G5AUD3 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSHGLG00000016556	Ensembl, ENTREZGENE
Ensembl Transcript	ENSHGLT00000023438	ENTREZGENE
Gene3D-CATH	1.20.1280.50	UniProtKB/TrEMBL
	Dbl homology (DH) domain	UniProtKB/TrEMBL
	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	UniProtKB/TrEMBL
InterPro	DBL_dom_sf	UniProtKB/TrEMBL
	DH-domain	UniProtKB/TrEMBL
	DUF4347	UniProtKB/TrEMBL
	F-box-like_dom_sf	UniProtKB/TrEMBL
	F-box_dom	UniProtKB/TrEMBL
	GEF_Ubiquitin-Prot_Reg	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Ect2l	ENTREZGENE
PANTHER	EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE	UniProtKB/TrEMBL
	EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE	UniProtKB/TrEMBL
Pfam	DUF4347	UniProtKB/TrEMBL
	F-box-like	UniProtKB/TrEMBL
	RhoGEF	UniProtKB/TrEMBL
PROSITE	DH_2	UniProtKB/TrEMBL
SMART	RhoGEF	UniProtKB/TrEMBL
Superfamily-SCOP	DBL homology domain (DH-domain)	UniProtKB/TrEMBL
	F-box domain	UniProtKB/TrEMBL
	PH domain-like	UniProtKB/TrEMBL
UniProt	A0AAX6SYX1	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6T0K0	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6T2Y9	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6T4S2	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6T4W5	ENTREZGENE, UniProtKB/TrEMBL
	G5AUD3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar