Cysltr1 (cysteinyl leukotriene receptor 1) - Rat Genome Database

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Gene: Cysltr1 (cysteinyl leukotriene receptor 1) Heterocephalus glaber
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Symbol: Cysltr1
Name: cysteinyl leukotriene receptor 1
RGD ID: 18904272
Description: ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic disease (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248362,556,269 - 2,597,008 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cysltr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248362,556,269 - 2,597,008 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CYSLTR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X78,271,468 - 78,327,611 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX78,271,468 - 78,327,691 (-)EnsemblGRCh38hg38GRCh38
GRCh37X77,526,965 - 77,583,108 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X77,414,786 - 77,469,743 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X77,334,275 - 77,389,232NCBI
CeleraX77,768,935 - 77,823,895 (-)NCBICelera
Cytogenetic MapXq21.1NCBI
HuRefX71,107,425 - 71,162,464 (-)NCBIHuRef
CHM1_1X77,421,213 - 77,476,168 (-)NCBICHM1_1
T2T-CHM13v2.0X76,708,793 - 76,764,940 (-)NCBIT2T-CHM13v2.0
Cysltr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X105,617,952 - 105,647,329 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX105,617,952 - 105,647,285 (-)EnsemblGRCm39 Ensembl
GRCm38X106,576,509 - 106,603,679 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX106,574,346 - 106,603,679 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X103,771,856 - 103,798,801 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X102,779,236 - 102,806,181 (-)NCBIMGSCv36mm8
CeleraX93,425,096 - 93,451,782 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX47.36NCBI
Cysltr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X75,734,281 - 75,762,873 (-)NCBIGRCr8
mRatBN7.2X71,661,421 - 71,690,012 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX71,663,821 - 71,690,121 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX73,181,064 - 73,182,083 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X76,680,942 - 76,681,961 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X74,236,459 - 74,237,478 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X77,671,028 - 77,700,491 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX77,674,150 - 77,700,269 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X77,868,476 - 77,895,363 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X94,802,078 - 94,803,097 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X94,875,510 - 94,876,530 (-)NCBI
CeleraX72,975,213 - 72,976,232 (-)NCBICelera
Cytogenetic MapXq22NCBI
Cysltr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555571,667,518 - 1,702,272 (-)NCBIChiLan1.0ChiLan1.0
CYSLTR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X77,810,414 - 77,868,764 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X77,813,609 - 77,872,375 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X67,412,410 - 67,469,366 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X77,523,188 - 77,579,350 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX77,524,455 - 77,525,468 (-)Ensemblpanpan1.1panPan2
CYSLTR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X60,462,290 - 60,513,155 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX60,463,526 - 60,464,548 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX51,475,377 - 51,526,196 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X61,701,015 - 61,766,649 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX61,701,032 - 61,766,592 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X59,407,128 - 59,457,919 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X61,017,129 - 61,067,958 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X60,605,215 - 60,656,035 (-)NCBIUU_Cfam_GSD_1.0
Cysltr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X54,157,074 - 54,184,386 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936547479,261 - 504,757 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CYSLTR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX62,380,780 - 62,456,689 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X62,380,778 - 62,407,736 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X71,478,976 - 71,505,912 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103232241
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X67,218,777 - 67,300,655 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX67,220,048 - 67,221,061 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236680982,664 - 5,209 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004867478   ⟹   XP_004867535
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248362,556,269 - 2,597,008 (+)NCBI
RefSeq Acc Id: XM_004867479   ⟹   XP_004867536
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248362,556,269 - 2,597,008 (+)NCBI
RefSeq Acc Id: XP_004867536   ⟸   XM_004867479
- UniProtKB: A0A0P6K1E6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004867535   ⟸   XM_004867478
- UniProtKB: A0A0P6K1E6 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000036741 UniProtKB/TrEMBL
  ENSHGLG00100038388 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000054031 UniProtKB/TrEMBL
  ENSHGLT00000069253 UniProtKB/TrEMBL
  ENSHGLT00000088340 UniProtKB/TrEMBL
  ENSHGLT00000089551 UniProtKB/TrEMBL
  ENSHGLT00100050721 UniProtKB/TrEMBL
  ENSHGLT00100056799 UniProtKB/TrEMBL
  ENSHGLT00100083478 UniProtKB/TrEMBL
  ENSHGLT00100083587 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro CLT1_recept UniProtKB/TrEMBL
  Cyst_leuk_rcpt UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
KEGG Report hgl:101713226 UniProtKB/TrEMBL
NCBI Gene Cysltr1 ENTREZGENE
PANTHER CYSTEINYL LEUKOTRIENE RECEPTOR 1 UniProtKB/TrEMBL
  PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS CYSLT1RECPTR UniProtKB/TrEMBL
  CYSLTRECPTR UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A0P6K1E6 ENTREZGENE, UniProtKB/TrEMBL