CYSLTR1 (cysteinyl leukotriene receptor 1)

Gene: CYSLTR1 (cysteinyl leukotriene receptor 1) Sus scrofa

Analyze

Symbol:

CYSLTR1

Name:

cysteinyl leukotriene receptor 1

RGD ID:

14296972

Description:

ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic disease (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

CYCLT1; CysLT1 receptor

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	62,380,780 - 62,456,689 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	62,380,778 - 62,407,736 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	71,478,976 - 71,505,912 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (ISO)

allergic asthma (ISO)

allergic disease (ISO)

aspirin-induced respiratory disease (ISO)

asthma (ISO)

autistic disorder (ISO)

Bronchial Hyperreactivity (ISO)

bronchiolitis (ISO)

Closed Fractures (ISO)

colon cancer (ISO)

drug allergy (ISO)

Dyspnea (ISO)

genetic disease (ISO)

Helicobacter Infections (ISO)

Inflammation (ISO)

lung disease (ISO)

Multiple Organ Failure (ISO)

Nasal Polyps (ISO)

obstructive sleep apnea (ISO)

Pneumococcal Meningitis (ISO)

prostate cancer (ISO)

pulmonary fibrosis (ISO)

pulmonary hypertension (ISO)

Reperfusion Injury (ISO)

rhinitis (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium ion transport (IEA,ISO)

cell surface receptor signaling pathway (IEA,ISO)

cellular response to hypoxia (ISO)

chemotaxis (IEA,ISO)

establishment of localization in cell (IEA,ISO)

G protein-coupled receptor signaling pathway (IBA,IEA)

inflammatory response to antigenic stimulus (IEA,ISO)

leukotriene signaling pathway (IEA)

neuropeptide signaling pathway (IBA)

positive regulation of angiogenesis (ISO)

positive regulation of glial cell proliferation (ISO)

positive regulation of vasoconstriction (ISO)

signal transduction (IEA)

Cellular Component

membrane (IEA)

plasma membrane (IBA,IEA)

Molecular Function

cysteinyl leukotriene receptor activity (IBA)

G protein-coupled peptide receptor activity (IBA)

G protein-coupled receptor activity (IEA)

leukotriene receptor activity (IEA,ISO)

protein binding (ISO)

signaling receptor activity (IBA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

endothelin signaling pathway (ISO)

References

Additional References at PubMed

PMID:17407547	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CYSLTR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	62,380,780 - 62,456,689 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	62,380,778 - 62,407,736 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	71,478,976 - 71,505,912 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CYSLTR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	78,271,468 - 78,327,611 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	78,271,468 - 78,327,691 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	77,526,965 - 77,583,108 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	77,414,786 - 77,469,743 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	77,334,275 - 77,389,232	NCBI
Celera	X	77,768,935 - 77,823,895 (-)	NCBI		Celera
Cytogenetic Map	X	q21.1	NCBI
HuRef	X	71,107,425 - 71,162,464 (-)	NCBI		HuRef
CHM1_1	X	77,421,213 - 77,476,168 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	76,708,793 - 76,764,940 (-)	NCBI		T2T-CHM13v2.0

Cysltr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	105,617,952 - 105,647,329 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	105,617,952 - 105,647,285 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	106,576,509 - 106,603,679 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	106,574,346 - 106,603,679 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	103,771,856 - 103,798,801 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	102,779,236 - 102,806,181 (-)	NCBI		MGSCv36	mm8
Celera	X	93,425,096 - 93,451,782 (-)	NCBI		Celera
Cytogenetic Map	X	D	NCBI
cM Map	X	47.36	NCBI

Cysltr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	75,734,281 - 75,762,873 (-)	NCBI		GRCr8
mRatBN7.2	X	71,661,421 - 71,690,012 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	71,663,821 - 71,690,121 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	73,181,064 - 73,182,083 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	76,680,942 - 76,681,961 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	74,236,459 - 74,237,478 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	77,671,028 - 77,700,491 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	77,674,150 - 77,700,269 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	77,868,476 - 77,895,363 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	94,802,078 - 94,803,097 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	94,875,510 - 94,876,530 (-)	NCBI
Celera	X	72,975,213 - 72,976,232 (-)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

Cysltr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955557	1,667,518 - 1,702,272 (-)	NCBI	ChiLan1.0	ChiLan1.0

CYSLTR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	77,810,414 - 77,868,764 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	77,813,609 - 77,872,375 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	67,412,410 - 67,469,366 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	77,523,188 - 77,579,350 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	77,524,455 - 77,525,468 (-)	Ensembl	panpan1.1		panPan2

CYSLTR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	60,462,290 - 60,513,155 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	60,463,526 - 60,464,548 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	51,475,377 - 51,526,196 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	61,701,015 - 61,766,649 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	61,701,032 - 61,766,592 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	59,407,128 - 59,457,919 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	61,017,129 - 61,067,958 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	60,605,215 - 60,656,035 (-)	NCBI		UU_Cfam_GSD_1.0

Cysltr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	54,157,074 - 54,184,386 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936547	479,261 - 504,757 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC103232241
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	67,218,777 - 67,300,655 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	67,220,048 - 67,221,061 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023668098	2,664 - 5,209 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cysltr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624836	2,556,269 - 2,597,008 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CYSLTR1
374 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	10	4	3	5	2	19	2	3	3
Below cutoff						4

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_214129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005673734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021079498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021079499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021079501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB052686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AEMK02000117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EW480480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP236267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01061469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000063423 ⟹ ENSSSCP00000034195

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	X	62,380,780 - 62,407,524 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000077185 ⟹ ENSSSCP00000073858

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	X	62,382,650 - 62,456,689 (-)	Ensembl

RefSeq Acc Id:

NM_214129 ⟹ NP_999294

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	62,382,646 - 62,384,670 (-)	NCBI

Sequence:

show sequence

GCACCAAGCAGACATTCCTAGAGAAACATGGATGGAGTCCGAAATCTGACAGTATCTTCTGCCA
GTAGTAATACATGCAATGACACTATTGATGACTTCCGCAATCAAGTATATTCCACCTTGTACTC
TATGATCACCGTTGTGGGTTTCTTCGGCAATGGCTTTGTGCTCTATGTTCTCATAAAAACATAT
CATGAGAAGTCAGCATACCAAGTATACATGATTAATTTAGCAGTAGCAGATCTACTATGCGTGT
GCACACTGCCTCTTCGTGTGGTCTATTATGTCCACAAAGGAATTTGGCTATTTGGTGACTTTTT
GTGTCGCCTCAGCACCTATGCCTTGTATGTCAACCTCTACTGTAGCATTTTCTTTATGACGGCC
ATGAGCTTTTTCCGGTGCATCGCAATTGTTTTCCCAGTCCAGAACATTAATTTGATTACACATA
AAAAAGCCAAGATTGTATGCATTGCTATTTGGATTTTTGTGATTTTGACTAGTTCTCCATTTTT
AATGTCCACATCTTACAAAGATGAGAAAAACAATACCAAGTGCTTTGAGCCTCCACAGGACAAT
CAAGCTAAATATCATGTTTTGGTCTTGCATTATGTGTCATTATTTGTAGGATTTATCATTCCTT
TTGTTATTATAATTGTCTGTTATACAATGATCATTTTGACCTTACTAAAAAATTCAATGAAGAA
AAATATATCAAGCCGTAAAAAGGCTATAGGAATGATTATAGTTGTGACAGCTGCCTTTTTAATC
AGTTTCATGCCATATCACATTCAACGCACCATTCATCTTCACTTTTTACACAACGACACTAAAC
ACTGTGATTCTGTACTTAGAATGCAAAAGTCAGTGGTCATAACCTTGTCTCTGGCCGCATCAAA
TTGTTGCTTTGACCCTCTCCTATATTTCTTCTCTGGAGGGAACTTTAGGAGAAGGCTATCTACA
TTTAGAAAGCATTCTTTGTCCAGTATGACTTATGTACCCAAGAAGAAGACCTCCTTGCCAGAAA
AAGGAGAAGAAATATATAAAGAATAGCTTAAACCCATCTCTGATGATTTTCCCAAACAAGTATT
TTCTCCAGGCATTCACAATAAAAATAAGAATTTCCATTAATAATTTACAAAATACTTAACTGAG
TATGTACCTATAAATCTATCTCATTTATGTATCCACGTTATTAGAGGTCCTAAAGATATTTTGT
GTTAAAATTTAGCCTACATCTATTAACTCAACTATAAATTTTTTTATCATTCACCTAATAGTGC
AGAATATTTATATCTTGGCACTGTTTTAAAAAAATGGGTTTGAGATCAAGGTTTTCTCCTTCAA
ATAAAAGCTTTACAAAGGATAAGAACTAGCTTTTTAAGATATAAATTTAGCTAATAGTTCTCAG
TGATCCTAACATATCCCTTTGCATGCATGCCATCAGATGAGAACTGGAATGAACCAGGAACTAC
ATAAAACGTACTATCACCGTCTTCCTTGGTCATACTGACTGGCTAGGCAAAAAGGGCCATTTCT
TCCAAAAGAAAATTTGCAAGTGTTAGCGCAGCCTAGCCTTCAGCCAAATGGCACTAACAGCCAT
TGTACAGTCTGGAAACTGAGGAAGATAAACCTGATCAAAAGCCAGTTTGTTTCCAGTTTTCTTC
TGCTTCTACCATAAGCTTCCAAAAAAGAATGATGGAGTTGTTTTTTCCCATTGATATAGATTGA
GGTTCTTATAGGGACTTCTCTCCCTACATGACATACAACTCTTCCTTAAGAAACCAGACAACCA
GCACCACCATATATGAACAGAAGTTATTAAAAATGTATCTAAAGAAGAGGAAAAGGGGTCTACT
TTTCTACACACTTATTACTGGGATCAAAATTAATTTTGATGTGTTTCTGAATAAAAATTTGAAA
GTCAATATTAAAAATTTTAAGAAGCACTTATATGTACACATATTTGTAAAATTATATTGAGATT
TTGTTATATGCATTTATGATTAAAAGTTAATTATAAGCTTTAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_005673734 ⟹ XP_005673791

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	62,380,778 - 62,407,736 (-)	NCBI

Sequence:

show sequence

ACTCCTTTCTGCTTCCCATCTCAGAGCAGCTGTGTGATTTCCTGAGGATTCCATTTCTGGAGCT
AGGGATAAAAGCTCATTTATACACACAACAACCTGCAAGTCTCCAGTTTCAATTCTTCCTCCCT
CCCTCTGCCTTCCCTCCCCCACTTTGAACCAGAGAAGCCAAATGAGGCGTGCTTTAAACAGTTT
CAGGACTAATCTGAAAGAGGAAGAAGAATCTGTATACACTGGCTAGCCTTTGTGCCCTGCCCTC
TTTCCTCTTGAAAATAGCAACAACTCATCTTTTCAAAAAAGCTTTCAGGCACCCTGTGAATGGC
GTGTACTTTCAAGACCTTCCGGGGTATTAAGATTCATTGTACAGCTCACTAGGGATGATTAGCT
TTCCAAGGGACCAGTAGATTGGATTTACTGAAGACTTGGAACTTGCTTCTGAGAGTGAATGCAA
AAGGATCATAAACTGTCAACCTTGAAGTTAGCAGCCTAGGCTTCATCTGATACTACATCATAAG
AACCACTGACCACTAACCAGAAACATTCGTGAAGGGTACTGCAGTGCCAGAAAGAGGCACCAAG
CAGACATTCCTAGAGAAACATGGATGGAGTCCGAAATCTGACAGTATCTTCTGCCAGTAGTAAT
ACATGCAATGACACTATTGATGACTTCCGCAATCAAGTATATTCCACCTTGTACTCTATGATCA
CCGTTGTGGGTTTCTTCGGCAATGGCTTTGTGCTCTATGTTCTCATAAAAACATATCATGAGAA
GTCAGCATACCAAGTATACATGATTAATTTAGCAGTAGCAGATCTACTATGCGTGTGCACACTG
CCTCTTCGTGTGGTCTATTATGTCCACAAAGGAATTTGGCTATTTGGTGACTTTTTGTGTCGCC
TCAGCACCTATGCCTTGTATGTCAACCTCTACTGTAGCATTTTCTTTATGACGGCCATGAGCTT
TTTCCGGTGCATCGCAATTGTTTTCCCAGTCCAGAACATTAATTTGATTACACATAAAAAAGCC
AAGATTGTATGCATTGCTATTTGGATTTTTGTGATTTTGACTAGTTCTCCATTTTTAATGTCCA
CATCTTACAAAGATGAGAAAAACAATACCAAGTGCTTTGAGCCTCCACAGGACAATCAAGCTAA
ATATCATGTTTTGGTCTTGCATTATGTGTCATTATTTGTAGGATTTATCATTCCTTTTGTTATT
ATAATTGTCTGTTATACAATGATCATTTTGACCTTACTAAAAAATTCAATGAAGAAAAATATAT
CAAGCCGTAAAAAGGCTATAGGAATGATTATAGTTGTGACAGCTGCCTTTTTAATCAGTTTCAT
GCCATATCACATTCAACGCACCATTCATCTTCACTTTTTACACAACGACACTAAACACTGTGAT
TCTGTACTTAGAATGCAAAAGTCAGTGGTCATAACCTTGTCTCTGGCCGCATCAAATTGTTGCT
TTGACCCTCTCCTATATTTCTTCTCTGGAGGGAACTTTAGGAGAAGGCTATCTACATTTAGAAA
GCATTCTTTGTCCAGTATGACTTATGTACCCAAGAAGAAGACCTCCTTGCCAGAAAAAGGAGAA
GAAATATATAAAGAATAGCTTAAACCCATCTCTGATGATTTTCCCAAACAAGTATTTTCTCCAG
GCATTCACAATAAAAATAAGAATTTCCATTAATAATTTACAAAATACTTAACTGAGTATGTACC
TATAAATCTATCTCATTTATGTATCCACGTTATTAGAGGTCCTAAAGATATTTTGTGTTAAAAT
TTAGCCTACATCTATTAACTCAACTATAAATTTTTTTATCATTCACCTAATAGTGCAGAATATT
TATATCTTGGCACTGTTTTAAAAAAATGGGTTTGAGATCAAGGTTTTCTCCTTCAAATAAAAGC
TTTACAAAGGATAAGAACTAGCTTTTTAAGATATAAATTTAGCTAATAGTTCTCAGTGATCCTA
ACATATCCCTTTGCATGCATGCCATCAGATGAGAACTGGAATGAACCAGGAACTACATAAAACG
TACTATCACCGTCTTCCTTGGTCATACTGACTGGCTAGGCAAAAAGGGCCATTTCTTCCAAAAG
AAAATTTGCAAGTGTTAGCGCAGCCTAGCCTTCAGCCAAATGGCACTAACAGCCATTGTACAGT
CTGGAAACTGAGGAAGATAAACCTGATCAAAAGCCAGTTTGTTTCCAGTTTTCTTCTGCTTCTA
CCATAAGCTTCCAAAAAAGAATGATGGAGTTGTTTTTTCCCATTGATATAGATTGAGGTTCTTA
TAGGGACTTCTCTCCCTACATGACATACAACTCTTCCTTAAGAAACCAGACAACCAGCACCACC
ATATATGAACAGAAGTTATTAAAAATGTATCTAAAGAAGAGGAAAAGGGGTCTACTTTTCTACA
CACTTATTACTGGGATCAAAATTAATTTTGATGTGTTTCTGAATAAAAATTTGAAAGTCAATAT
TAAAAATTTTAAGAAGCACTTATATGTACACATATTTGTAAAATTATATTGAGATTTTGTTATA
TGCATTTATGATTAAAAGTTAATTATAAGCTTTGTTATTGTTTTATGTTTTTTATTGGCATGTT
GACAGGATATGTTTACAGCATTTTTTTAATATTAAAATGGAAATTTTGTTCTTAAAACAGCAGT
AGCTTGTTTATGGCTGAAATATAATATTCATGGGCAAGCTTTTGCTGAAGTGTAGTCTGTTCCT
TAATTCTATGTTTCAAAAGGTGCCTCATCTCAGAGGAAATAAATGATAATGGTGGAAAAAAGAA
AATCTAGGAAAGGAGAAGATTCTATCTGAATCTGCCATGTGTAGGTTATTTCTATTTCACTTCT
AATGTTGCAATCACTTATATAGAAAATTTGAAAGAGGATCTCTAAGGCACAGTGATAAATGGTG
CCCATTTATTTTTAACATACCCGAGATTCAGCAGTACCTTACTTTGCCCTATTTTTTCCTTATT
TGACAAAGATAAAATGTAATAGTTATAAAATCAGCCTTCATTTCTCATTTACTAAGCTTTCTGC
TATTCAATAGGTATAGTGTAGTAACAGAACACTACGTTGAAAGCCAGAAGACCTGGATGCTGTT
ACTTACTGGTATTGAAACTTAAAGAAAGTAAAATAAATTCTGATTATTAGCTTCCTCACTTGAT
AAATGGGACTAATAATACTTGTCCTGCATTTCTTACAGGGCATCTTTGAAACTCAATTGTGATC
GTAGTATATATACATATTTAACCCACATATATTAAAGTTTTACTTGAAAAATACATGGTGTGAT
ATAATTTATCACACTAAATATAAAGTATTTAGAGATGGTTTGTTATACATACTAAATCATATTT
ACTACATAGATTCTCATTTCTGAAAGAATTAGAACAAAATATGGCCATAGTTAAAAATTTATTG
CACATAAAAGAATCTTGTTGCTTATTTATTCCTACTCTCAGGTTTTTGCCTATGTTCTGACTTC
CAGCCACAGCCCCACTTCCTCCTACACAGAAACATAGCATACTTCAATTACCTACAAGCTCACC
ATGAATTTGTTCTTGTTTAATGTCATGTATTTATAGCCTATACCACACTATTTTGTACTTCCTT
TTCCCCCAATTTTTTGGTGAATATTAGCATTTTCTCCCAAAATGGAATAATCACTTTTTGGAAT
TAACAATTCCTTGAGGTTGAAAATTATGCCTTTAAATTATAGTGCCTAAAATTTAATGAGCTTT
TGCTCTGTTTTAAGTGCTTTATCTATAGCAATTCATTTAATGCTTACAATTGTCCTGTGAGGTA
GGTACCATTATTATCTCTTTTTTGCTGATTTACAAACAGAGGCGCAAAGGGGTTAGTAACTTAC
ACAATGTCAAACAAATGGTAAGCATCAGAAACTGGGTTCAAATCTAGACAATCTGATTCCAGAT
CTCCTAAATTATTAATTTGCTATGCTATTCTCCTGGGCCTTCAGATATCTTCGAAATATAAGGA
GTAGGAACAAAAGTTTTTTAATGATTTATTTGTTCTTTTTTTAAAACCAGGCTTAATTAAACTA
CATGCTTAAATTTTTAAATAACATGAAGACATGGACTATGACCTAATGCCTATGATTTTATTTG
TAAGAACATCTTAAGAATATTATAAACTGTCTTGGAACATTGACATTATAAATACTTTATGTAT
ATAATTCCTAATGGCTATATAATACCCTGTGGCATTCACATGCCGTATCTTCGAGCATATTTCT
CTGGTCTCTAATTCTTTCAAATCTCATTAGCTGTCCAAGATCTCTTTTATTATACACTTAGCTT
TTTATTTTGTTCAGCCAATATGGTTTATGTATCTGAAAAAAATAATTTCATATCTTAAAGCACT
GCTTTGTATTTTATTCTCCAGAATAAACATACATGGTTTTGTGTA

hide sequence

RefSeq Acc Id:

XM_021079498 ⟹ XP_020935157

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	62,380,778 - 62,407,736 (-)	NCBI

Sequence:

show sequence

ACTCCTTTCTGCTTCCCATCTCAGAGCAGCTGTGTGATTTCCTGAGGATTCCATTTCTGGAGCT
AGGGATAAAAGCTCATTTATACACACAACAACCTGCAAGTCTCCAGTTTCAATTCTTCCTCCCT
CCCTCTGCCTTCCCTCCCCCACTTTGAACCAGAGAAGCCAAATGAGGCGTGCTTTAAACAGTTT
CAGGACTAATCTGAAAGAGGAAGAAGAATCTGTATACACTGGCTAGCCTTTGTGCCCTGCCCTC
TTTCCTCTTGAAAATAGCAACAACTCATCTTTTCAAAAAAGCTTTCAGGCACCCTGTGAATGGC
GTGTACTTTCAAGACCTTCCGGGGTATTAAGATTCATTGTACAGCTCACTAGGGATGATTAGCT
TTCCAAGGGACCAGTAGATTGGATTTACTGAAGACTTGGAACTTGCTTCTGAGAGTGAATGCAA
AAGGATCATAAACTGTCAACCTTGAAGTTAGCAGCCAGGAAGAAATGGGACCTCAATCATACAC
TAACAAGGAATGAATTTTGCTAACAACTAGTGATCCCTAGCCTCAGATGAGGTCTCAATTCTGG
CTTACAACTTGATTGCAGTCTGTGAGACCCTAAGCAGAAGACCCAGCTAACTTGTACCTGAACT
CCTGATCCACAGAAACTATGAGAAACCTAGGCTTCATCTGATACTACATCATAAGAACCACTGA
CCACTAACCAGAAACATTCGTGAAGGGTACTGCAGTGCCAGAAAGAGGCACCAAGCAGACATTC
CTAGAGAAACATGGATGGAGTCCGAAATCTGACAGTATCTTCTGCCAGTAGTAATACATGCAAT
GACACTATTGATGACTTCCGCAATCAAGTATATTCCACCTTGTACTCTATGATCACCGTTGTGG
GTTTCTTCGGCAATGGCTTTGTGCTCTATGTTCTCATAAAAACATATCATGAGAAGTCAGCATA
CCAAGTATACATGATTAATTTAGCAGTAGCAGATCTACTATGCGTGTGCACACTGCCTCTTCGT
GTGGTCTATTATGTCCACAAAGGAATTTGGCTATTTGGTGACTTTTTGTGTCGCCTCAGCACCT
ATGCCTTGTATGTCAACCTCTACTGTAGCATTTTCTTTATGACGGCCATGAGCTTTTTCCGGTG
CATCGCAATTGTTTTCCCAGTCCAGAACATTAATTTGATTACACATAAAAAAGCCAAGATTGTA
TGCATTGCTATTTGGATTTTTGTGATTTTGACTAGTTCTCCATTTTTAATGTCCACATCTTACA
AAGATGAGAAAAACAATACCAAGTGCTTTGAGCCTCCACAGGACAATCAAGCTAAATATCATGT
TTTGGTCTTGCATTATGTGTCATTATTTGTAGGATTTATCATTCCTTTTGTTATTATAATTGTC
TGTTATACAATGATCATTTTGACCTTACTAAAAAATTCAATGAAGAAAAATATATCAAGCCGTA
AAAAGGCTATAGGAATGATTATAGTTGTGACAGCTGCCTTTTTAATCAGTTTCATGCCATATCA
CATTCAACGCACCATTCATCTTCACTTTTTACACAACGACACTAAACACTGTGATTCTGTACTT
AGAATGCAAAAGTCAGTGGTCATAACCTTGTCTCTGGCCGCATCAAATTGTTGCTTTGACCCTC
TCCTATATTTCTTCTCTGGAGGGAACTTTAGGAGAAGGCTATCTACATTTAGAAAGCATTCTTT
GTCCAGTATGACTTATGTACCCAAGAAGAAGACCTCCTTGCCAGAAAAAGGAGAAGAAATATAT
AAAGAATAGCTTAAACCCATCTCTGATGATTTTCCCAAACAAGTATTTTCTCCAGGCATTCACA
ATAAAAATAAGAATTTCCATTAATAATTTACAAAATACTTAACTGAGTATGTACCTATAAATCT
ATCTCATTTATGTATCCACGTTATTAGAGGTCCTAAAGATATTTTGTGTTAAAATTTAGCCTAC
ATCTATTAACTCAACTATAAATTTTTTTATCATTCACCTAATAGTGCAGAATATTTATATCTTG
GCACTGTTTTAAAAAAATGGGTTTGAGATCAAGGTTTTCTCCTTCAAATAAAAGCTTTACAAAG
GATAAGAACTAGCTTTTTAAGATATAAATTTAGCTAATAGTTCTCAGTGATCCTAACATATCCC
TTTGCATGCATGCCATCAGATGAGAACTGGAATGAACCAGGAACTACATAAAACGTACTATCAC
CGTCTTCCTTGGTCATACTGACTGGCTAGGCAAAAAGGGCCATTTCTTCCAAAAGAAAATTTGC
AAGTGTTAGCGCAGCCTAGCCTTCAGCCAAATGGCACTAACAGCCATTGTACAGTCTGGAAACT
GAGGAAGATAAACCTGATCAAAAGCCAGTTTGTTTCCAGTTTTCTTCTGCTTCTACCATAAGCT
TCCAAAAAAGAATGATGGAGTTGTTTTTTCCCATTGATATAGATTGAGGTTCTTATAGGGACTT
CTCTCCCTACATGACATACAACTCTTCCTTAAGAAACCAGACAACCAGCACCACCATATATGAA
CAGAAGTTATTAAAAATGTATCTAAAGAAGAGGAAAAGGGGTCTACTTTTCTACACACTTATTA
CTGGGATCAAAATTAATTTTGATGTGTTTCTGAATAAAAATTTGAAAGTCAATATTAAAAATTT
TAAGAAGCACTTATATGTACACATATTTGTAAAATTATATTGAGATTTTGTTATATGCATTTAT
GATTAAAAGTTAATTATAAGCTTTGTTATTGTTTTATGTTTTTTATTGGCATGTTGACAGGATA
TGTTTACAGCATTTTTTTAATATTAAAATGGAAATTTTGTTCTTAAAACAGCAGTAGCTTGTTT
ATGGCTGAAATATAATATTCATGGGCAAGCTTTTGCTGAAGTGTAGTCTGTTCCTTAATTCTAT
GTTTCAAAAGGTGCCTCATCTCAGAGGAAATAAATGATAATGGTGGAAAAAAGAAAATCTAGGA
AAGGAGAAGATTCTATCTGAATCTGCCATGTGTAGGTTATTTCTATTTCACTTCTAATGTTGCA
ATCACTTATATAGAAAATTTGAAAGAGGATCTCTAAGGCACAGTGATAAATGGTGCCCATTTAT
TTTTAACATACCCGAGATTCAGCAGTACCTTACTTTGCCCTATTTTTTCCTTATTTGACAAAGA
TAAAATGTAATAGTTATAAAATCAGCCTTCATTTCTCATTTACTAAGCTTTCTGCTATTCAATA
GGTATAGTGTAGTAACAGAACACTACGTTGAAAGCCAGAAGACCTGGATGCTGTTACTTACTGG
TATTGAAACTTAAAGAAAGTAAAATAAATTCTGATTATTAGCTTCCTCACTTGATAAATGGGAC
TAATAATACTTGTCCTGCATTTCTTACAGGGCATCTTTGAAACTCAATTGTGATCGTAGTATAT
ATACATATTTAACCCACATATATTAAAGTTTTACTTGAAAAATACATGGTGTGATATAATTTAT
CACACTAAATATAAAGTATTTAGAGATGGTTTGTTATACATACTAAATCATATTTACTACATAG
ATTCTCATTTCTGAAAGAATTAGAACAAAATATGGCCATAGTTAAAAATTTATTGCACATAAAA
GAATCTTGTTGCTTATTTATTCCTACTCTCAGGTTTTTGCCTATGTTCTGACTTCCAGCCACAG
CCCCACTTCCTCCTACACAGAAACATAGCATACTTCAATTACCTACAAGCTCACCATGAATTTG
TTCTTGTTTAATGTCATGTATTTATAGCCTATACCACACTATTTTGTACTTCCTTTTCCCCCAA
TTTTTTGGTGAATATTAGCATTTTCTCCCAAAATGGAATAATCACTTTTTGGAATTAACAATTC
CTTGAGGTTGAAAATTATGCCTTTAAATTATAGTGCCTAAAATTTAATGAGCTTTTGCTCTGTT
TTAAGTGCTTTATCTATAGCAATTCATTTAATGCTTACAATTGTCCTGTGAGGTAGGTACCATT
ATTATCTCTTTTTTGCTGATTTACAAACAGAGGCGCAAAGGGGTTAGTAACTTACACAATGTCA
AACAAATGGTAAGCATCAGAAACTGGGTTCAAATCTAGACAATCTGATTCCAGATCTCCTAAAT
TATTAATTTGCTATGCTATTCTCCTGGGCCTTCAGATATCTTCGAAATATAAGGAGTAGGAACA
AAAGTTTTTTAATGATTTATTTGTTCTTTTTTTAAAACCAGGCTTAATTAAACTACATGCTTAA
ATTTTTAAATAACATGAAGACATGGACTATGACCTAATGCCTATGATTTTATTTGTAAGAACAT
CTTAAGAATATTATAAACTGTCTTGGAACATTGACATTATAAATACTTTATGTATATAATTCCT
AATGGCTATATAATACCCTGTGGCATTCACATGCCGTATCTTCGAGCATATTTCTCTGGTCTCT
AATTCTTTCAAATCTCATTAGCTGTCCAAGATCTCTTTTATTATACACTTAGCTTTTTATTTTG
TTCAGCCAATATGGTTTATGTATCTGAAAAAAATAATTTCATATCTTAAAGCACTGCTTTGTAT
TTTATTCTCCAGAATAAACATACATGGTTTTGTGTA

hide sequence

RefSeq Acc Id:

XM_021079499 ⟹ XP_020935158

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	62,380,778 - 62,407,736 (-)	NCBI

Sequence:

show sequence

ACTCCTTTCTGCTTCCCATCTCAGAGCAGCTGTGTGATTTCCTGAGGATTCCATTTCTGGAGCT
AGGGATAAAAGCTCATTTATACACACAACAACCTGCAAGTCTCCAGTTTCAATTCTTCCTCCCT
CCCTCTGCCTTCCCTCCCCCACTTTGAACCAGAGAAGCCAAATGAGGCGTGCTTTAAACAGTTT
CAGGACTAATCTGAAAGAGGAAGAAGAATCTGTATACACTGGCTAGCCTTTGTGCCCTGCCCTC
TTTCCTCTTGAAAATAGCAACAACTCATCTTTTCAAAAAAGCTTTCAGGCACCCTGTGAATGGC
GTGTACTTTCAAGACCTTCCGGGGTATTAAGATTCATTGTACAGCTCACTAGGGATGATTAGCT
TTCCAAGGGACCAGTAGATTGGATTTACTGAAGACTTGGAACTTGCTTCTGAGAGTGAATGCAA
AAGGATCATAAACTGTCAACCTTGAAGTTAGCAGTCTGTGAGACCCTAAGCAGAAGACCCAGCT
AACTTGTACCTGAACTCCTGATCCACAGAAACTATGAGAAACCTAGGCTTCATCTGATACTACA
TCATAAGAACCACTGACCACTAACCAGAAACATTCGTGAAGGGTACTGCAGTGCCAGAAAGAGG
CACCAAGCAGACATTCCTAGAGAAACATGGATGGAGTCCGAAATCTGACAGTATCTTCTGCCAG
TAGTAATACATGCAATGACACTATTGATGACTTCCGCAATCAAGTATATTCCACCTTGTACTCT
ATGATCACCGTTGTGGGTTTCTTCGGCAATGGCTTTGTGCTCTATGTTCTCATAAAAACATATC
ATGAGAAGTCAGCATACCAAGTATACATGATTAATTTAGCAGTAGCAGATCTACTATGCGTGTG
CACACTGCCTCTTCGTGTGGTCTATTATGTCCACAAAGGAATTTGGCTATTTGGTGACTTTTTG
TGTCGCCTCAGCACCTATGCCTTGTATGTCAACCTCTACTGTAGCATTTTCTTTATGACGGCCA
TGAGCTTTTTCCGGTGCATCGCAATTGTTTTCCCAGTCCAGAACATTAATTTGATTACACATAA
AAAAGCCAAGATTGTATGCATTGCTATTTGGATTTTTGTGATTTTGACTAGTTCTCCATTTTTA
ATGTCCACATCTTACAAAGATGAGAAAAACAATACCAAGTGCTTTGAGCCTCCACAGGACAATC
AAGCTAAATATCATGTTTTGGTCTTGCATTATGTGTCATTATTTGTAGGATTTATCATTCCTTT
TGTTATTATAATTGTCTGTTATACAATGATCATTTTGACCTTACTAAAAAATTCAATGAAGAAA
AATATATCAAGCCGTAAAAAGGCTATAGGAATGATTATAGTTGTGACAGCTGCCTTTTTAATCA
GTTTCATGCCATATCACATTCAACGCACCATTCATCTTCACTTTTTACACAACGACACTAAACA
CTGTGATTCTGTACTTAGAATGCAAAAGTCAGTGGTCATAACCTTGTCTCTGGCCGCATCAAAT
TGTTGCTTTGACCCTCTCCTATATTTCTTCTCTGGAGGGAACTTTAGGAGAAGGCTATCTACAT
TTAGAAAGCATTCTTTGTCCAGTATGACTTATGTACCCAAGAAGAAGACCTCCTTGCCAGAAAA
AGGAGAAGAAATATATAAAGAATAGCTTAAACCCATCTCTGATGATTTTCCCAAACAAGTATTT
TCTCCAGGCATTCACAATAAAAATAAGAATTTCCATTAATAATTTACAAAATACTTAACTGAGT
ATGTACCTATAAATCTATCTCATTTATGTATCCACGTTATTAGAGGTCCTAAAGATATTTTGTG
TTAAAATTTAGCCTACATCTATTAACTCAACTATAAATTTTTTTATCATTCACCTAATAGTGCA
GAATATTTATATCTTGGCACTGTTTTAAAAAAATGGGTTTGAGATCAAGGTTTTCTCCTTCAAA
TAAAAGCTTTACAAAGGATAAGAACTAGCTTTTTAAGATATAAATTTAGCTAATAGTTCTCAGT
GATCCTAACATATCCCTTTGCATGCATGCCATCAGATGAGAACTGGAATGAACCAGGAACTACA
TAAAACGTACTATCACCGTCTTCCTTGGTCATACTGACTGGCTAGGCAAAAAGGGCCATTTCTT
CCAAAAGAAAATTTGCAAGTGTTAGCGCAGCCTAGCCTTCAGCCAAATGGCACTAACAGCCATT
GTACAGTCTGGAAACTGAGGAAGATAAACCTGATCAAAAGCCAGTTTGTTTCCAGTTTTCTTCT
GCTTCTACCATAAGCTTCCAAAAAAGAATGATGGAGTTGTTTTTTCCCATTGATATAGATTGAG
GTTCTTATAGGGACTTCTCTCCCTACATGACATACAACTCTTCCTTAAGAAACCAGACAACCAG
CACCACCATATATGAACAGAAGTTATTAAAAATGTATCTAAAGAAGAGGAAAAGGGGTCTACTT
TTCTACACACTTATTACTGGGATCAAAATTAATTTTGATGTGTTTCTGAATAAAAATTTGAAAG
TCAATATTAAAAATTTTAAGAAGCACTTATATGTACACATATTTGTAAAATTATATTGAGATTT
TGTTATATGCATTTATGATTAAAAGTTAATTATAAGCTTTGTTATTGTTTTATGTTTTTTATTG
GCATGTTGACAGGATATGTTTACAGCATTTTTTTAATATTAAAATGGAAATTTTGTTCTTAAAA
CAGCAGTAGCTTGTTTATGGCTGAAATATAATATTCATGGGCAAGCTTTTGCTGAAGTGTAGTC
TGTTCCTTAATTCTATGTTTCAAAAGGTGCCTCATCTCAGAGGAAATAAATGATAATGGTGGAA
AAAAGAAAATCTAGGAAAGGAGAAGATTCTATCTGAATCTGCCATGTGTAGGTTATTTCTATTT
CACTTCTAATGTTGCAATCACTTATATAGAAAATTTGAAAGAGGATCTCTAAGGCACAGTGATA
AATGGTGCCCATTTATTTTTAACATACCCGAGATTCAGCAGTACCTTACTTTGCCCTATTTTTT
CCTTATTTGACAAAGATAAAATGTAATAGTTATAAAATCAGCCTTCATTTCTCATTTACTAAGC
TTTCTGCTATTCAATAGGTATAGTGTAGTAACAGAACACTACGTTGAAAGCCAGAAGACCTGGA
TGCTGTTACTTACTGGTATTGAAACTTAAAGAAAGTAAAATAAATTCTGATTATTAGCTTCCTC
ACTTGATAAATGGGACTAATAATACTTGTCCTGCATTTCTTACAGGGCATCTTTGAAACTCAAT
TGTGATCGTAGTATATATACATATTTAACCCACATATATTAAAGTTTTACTTGAAAAATACATG
GTGTGATATAATTTATCACACTAAATATAAAGTATTTAGAGATGGTTTGTTATACATACTAAAT
CATATTTACTACATAGATTCTCATTTCTGAAAGAATTAGAACAAAATATGGCCATAGTTAAAAA
TTTATTGCACATAAAAGAATCTTGTTGCTTATTTATTCCTACTCTCAGGTTTTTGCCTATGTTC
TGACTTCCAGCCACAGCCCCACTTCCTCCTACACAGAAACATAGCATACTTCAATTACCTACAA
GCTCACCATGAATTTGTTCTTGTTTAATGTCATGTATTTATAGCCTATACCACACTATTTTGTA
CTTCCTTTTCCCCCAATTTTTTGGTGAATATTAGCATTTTCTCCCAAAATGGAATAATCACTTT
TTGGAATTAACAATTCCTTGAGGTTGAAAATTATGCCTTTAAATTATAGTGCCTAAAATTTAAT
GAGCTTTTGCTCTGTTTTAAGTGCTTTATCTATAGCAATTCATTTAATGCTTACAATTGTCCTG
TGAGGTAGGTACCATTATTATCTCTTTTTTGCTGATTTACAAACAGAGGCGCAAAGGGGTTAGT
AACTTACACAATGTCAAACAAATGGTAAGCATCAGAAACTGGGTTCAAATCTAGACAATCTGAT
TCCAGATCTCCTAAATTATTAATTTGCTATGCTATTCTCCTGGGCCTTCAGATATCTTCGAAAT
ATAAGGAGTAGGAACAAAAGTTTTTTAATGATTTATTTGTTCTTTTTTTAAAACCAGGCTTAAT
TAAACTACATGCTTAAATTTTTAAATAACATGAAGACATGGACTATGACCTAATGCCTATGATT
TTATTTGTAAGAACATCTTAAGAATATTATAAACTGTCTTGGAACATTGACATTATAAATACTT
TATGTATATAATTCCTAATGGCTATATAATACCCTGTGGCATTCACATGCCGTATCTTCGAGCA
TATTTCTCTGGTCTCTAATTCTTTCAAATCTCATTAGCTGTCCAAGATCTCTTTTATTATACAC
TTAGCTTTTTATTTTGTTCAGCCAATATGGTTTATGTATCTGAAAAAAATAATTTCATATCTTA
AAGCACTGCTTTGTATTTTATTCTCCAGAATAAACATACATGGTTTTGTGTA

hide sequence

RefSeq Acc Id:

XM_021079501 ⟹ XP_020935160

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	62,380,778 - 62,407,736 (-)	NCBI

Sequence:

show sequence

ACTCCTTTCTGCTTCCCATCTCAGAGCAGCTGTGTGATTTCCTGAGGATTCCATTTCTGGAGCT
AGGGATAAAAGCTCATTTATACACACAACAACCTGCAAGTCTCCAGTTTCAATTCTTCCTCCCT
CCCTCTGCCTTCCCTCCCCCACTTTGAACCAGAGAAGCCAAATGAGGCGTGCTTTAAACAGTTT
CAGGACTAATCTGAAAGAGGAAGAAGAATCTGTATACACTGGCTAGCCTTTGTGCCCTGCCCTC
TTTCCTCTTGAAAATAGCAACAACTCATCTTTTCAAAAAAGCTTTCAGGCACCCTGTGAATGGC
GTGTACTTTCAAGACCTTCCGGGGTATTAAGATTCATTGTACAGCTCACTAGGGATGATTAGCT
TTCCAAGGGACCAGTAGATTGGATTTACTGAAGACTTGGAACTTGCTTCTGAGAGTGAATGCAA
AAGGATCATAAACTGTCAACCTTGAAGTTAGCAGGCACCAAGCAGACATTCCTAGAGAAACATG
GATGGAGTCCGAAATCTGACAGTATCTTCTGCCAGTAGTAATACATGCAATGACACTATTGATG
ACTTCCGCAATCAAGTATATTCCACCTTGTACTCTATGATCACCGTTGTGGGTTTCTTCGGCAA
TGGCTTTGTGCTCTATGTTCTCATAAAAACATATCATGAGAAGTCAGCATACCAAGTATACATG
ATTAATTTAGCAGTAGCAGATCTACTATGCGTGTGCACACTGCCTCTTCGTGTGGTCTATTATG
TCCACAAAGGAATTTGGCTATTTGGTGACTTTTTGTGTCGCCTCAGCACCTATGCCTTGTATGT
CAACCTCTACTGTAGCATTTTCTTTATGACGGCCATGAGCTTTTTCCGGTGCATCGCAATTGTT
TTCCCAGTCCAGAACATTAATTTGATTACACATAAAAAAGCCAAGATTGTATGCATTGCTATTT
GGATTTTTGTGATTTTGACTAGTTCTCCATTTTTAATGTCCACATCTTACAAAGATGAGAAAAA
CAATACCAAGTGCTTTGAGCCTCCACAGGACAATCAAGCTAAATATCATGTTTTGGTCTTGCAT
TATGTGTCATTATTTGTAGGATTTATCATTCCTTTTGTTATTATAATTGTCTGTTATACAATGA
TCATTTTGACCTTACTAAAAAATTCAATGAAGAAAAATATATCAAGCCGTAAAAAGGCTATAGG
AATGATTATAGTTGTGACAGCTGCCTTTTTAATCAGTTTCATGCCATATCACATTCAACGCACC
ATTCATCTTCACTTTTTACACAACGACACTAAACACTGTGATTCTGTACTTAGAATGCAAAAGT
CAGTGGTCATAACCTTGTCTCTGGCCGCATCAAATTGTTGCTTTGACCCTCTCCTATATTTCTT
CTCTGGAGGGAACTTTAGGAGAAGGCTATCTACATTTAGAAAGCATTCTTTGTCCAGTATGACT
TATGTACCCAAGAAGAAGACCTCCTTGCCAGAAAAAGGAGAAGAAATATATAAAGAATAGCTTA
AACCCATCTCTGATGATTTTCCCAAACAAGTATTTTCTCCAGGCATTCACAATAAAAATAAGAA
TTTCCATTAATAATTTACAAAATACTTAACTGAGTATGTACCTATAAATCTATCTCATTTATGT
ATCCACGTTATTAGAGGTCCTAAAGATATTTTGTGTTAAAATTTAGCCTACATCTATTAACTCA
ACTATAAATTTTTTTATCATTCACCTAATAGTGCAGAATATTTATATCTTGGCACTGTTTTAAA
AAAATGGGTTTGAGATCAAGGTTTTCTCCTTCAAATAAAAGCTTTACAAAGGATAAGAACTAGC
TTTTTAAGATATAAATTTAGCTAATAGTTCTCAGTGATCCTAACATATCCCTTTGCATGCATGC
CATCAGATGAGAACTGGAATGAACCAGGAACTACATAAAACGTACTATCACCGTCTTCCTTGGT
CATACTGACTGGCTAGGCAAAAAGGGCCATTTCTTCCAAAAGAAAATTTGCAAGTGTTAGCGCA
GCCTAGCCTTCAGCCAAATGGCACTAACAGCCATTGTACAGTCTGGAAACTGAGGAAGATAAAC
CTGATCAAAAGCCAGTTTGTTTCCAGTTTTCTTCTGCTTCTACCATAAGCTTCCAAAAAAGAAT
GATGGAGTTGTTTTTTCCCATTGATATAGATTGAGGTTCTTATAGGGACTTCTCTCCCTACATG
ACATACAACTCTTCCTTAAGAAACCAGACAACCAGCACCACCATATATGAACAGAAGTTATTAA
AAATGTATCTAAAGAAGAGGAAAAGGGGTCTACTTTTCTACACACTTATTACTGGGATCAAAAT
TAATTTTGATGTGTTTCTGAATAAAAATTTGAAAGTCAATATTAAAAATTTTAAGAAGCACTTA
TATGTACACATATTTGTAAAATTATATTGAGATTTTGTTATATGCATTTATGATTAAAAGTTAA
TTATAAGCTTTGTTATTGTTTTATGTTTTTTATTGGCATGTTGACAGGATATGTTTACAGCATT
TTTTTAATATTAAAATGGAAATTTTGTTCTTAAAACAGCAGTAGCTTGTTTATGGCTGAAATAT
AATATTCATGGGCAAGCTTTTGCTGAAGTGTAGTCTGTTCCTTAATTCTATGTTTCAAAAGGTG
CCTCATCTCAGAGGAAATAAATGATAATGGTGGAAAAAAGAAAATCTAGGAAAGGAGAAGATTC
TATCTGAATCTGCCATGTGTAGGTTATTTCTATTTCACTTCTAATGTTGCAATCACTTATATAG
AAAATTTGAAAGAGGATCTCTAAGGCACAGTGATAAATGGTGCCCATTTATTTTTAACATACCC
GAGATTCAGCAGTACCTTACTTTGCCCTATTTTTTCCTTATTTGACAAAGATAAAATGTAATAG
TTATAAAATCAGCCTTCATTTCTCATTTACTAAGCTTTCTGCTATTCAATAGGTATAGTGTAGT
AACAGAACACTACGTTGAAAGCCAGAAGACCTGGATGCTGTTACTTACTGGTATTGAAACTTAA
AGAAAGTAAAATAAATTCTGATTATTAGCTTCCTCACTTGATAAATGGGACTAATAATACTTGT
CCTGCATTTCTTACAGGGCATCTTTGAAACTCAATTGTGATCGTAGTATATATACATATTTAAC
CCACATATATTAAAGTTTTACTTGAAAAATACATGGTGTGATATAATTTATCACACTAAATATA
AAGTATTTAGAGATGGTTTGTTATACATACTAAATCATATTTACTACATAGATTCTCATTTCTG
AAAGAATTAGAACAAAATATGGCCATAGTTAAAAATTTATTGCACATAAAAGAATCTTGTTGCT
TATTTATTCCTACTCTCAGGTTTTTGCCTATGTTCTGACTTCCAGCCACAGCCCCACTTCCTCC
TACACAGAAACATAGCATACTTCAATTACCTACAAGCTCACCATGAATTTGTTCTTGTTTAATG
TCATGTATTTATAGCCTATACCACACTATTTTGTACTTCCTTTTCCCCCAATTTTTTGGTGAAT
ATTAGCATTTTCTCCCAAAATGGAATAATCACTTTTTGGAATTAACAATTCCTTGAGGTTGAAA
ATTATGCCTTTAAATTATAGTGCCTAAAATTTAATGAGCTTTTGCTCTGTTTTAAGTGCTTTAT
CTATAGCAATTCATTTAATGCTTACAATTGTCCTGTGAGGTAGGTACCATTATTATCTCTTTTT
TGCTGATTTACAAACAGAGGCGCAAAGGGGTTAGTAACTTACACAATGTCAAACAAATGGTAAG
CATCAGAAACTGGGTTCAAATCTAGACAATCTGATTCCAGATCTCCTAAATTATTAATTTGCTA
TGCTATTCTCCTGGGCCTTCAGATATCTTCGAAATATAAGGAGTAGGAACAAAAGTTTTTTAAT
GATTTATTTGTTCTTTTTTTAAAACCAGGCTTAATTAAACTACATGCTTAAATTTTTAAATAAC
ATGAAGACATGGACTATGACCTAATGCCTATGATTTTATTTGTAAGAACATCTTAAGAATATTA
TAAACTGTCTTGGAACATTGACATTATAAATACTTTATGTATATAATTCCTAATGGCTATATAA
TACCCTGTGGCATTCACATGCCGTATCTTCGAGCATATTTCTCTGGTCTCTAATTCTTTCAAAT
CTCATTAGCTGTCCAAGATCTCTTTTATTATACACTTAGCTTTTTATTTTGTTCAGCCAATATG
GTTTATGTATCTGAAAAAAATAATTTCATATCTTAAAGCACTGCTTTGTATTTTATTCTCCAGA
ATAAACATACATGGTTTTGTGTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_999294	(Get FASTA)	NCBI Sequence Viewer
	XP_005673791	(Get FASTA)	NCBI Sequence Viewer
	XP_020935157	(Get FASTA)	NCBI Sequence Viewer
	XP_020935158	(Get FASTA)	NCBI Sequence Viewer
	XP_020935160	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAB60826	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000034195
	ENSSSCP00000034195.1
	ENSSSCP00000073858
	ENSSSCP00000073858.1
	ENSSSCP00005006247.1
	ENSSSCP00015001406.1
	ENSSSCP00025042453.1
	ENSSSCP00030000413.1
	ENSSSCP00035023721.1
	ENSSSCP00040000506.1
	ENSSSCP00045015015.1
	ENSSSCP00050046333.1
	ENSSSCP00055003505.1
	ENSSSCP00055003516.1
	ENSSSCP00060041717.1
	ENSSSCP00065042187.1
	ENSSSCP00070013345.1
GenBank Protein	Q95N02	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_020935160 ⟸ XM_021079501
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZRT7 (UniProtKB/TrEMBL), A0A4X1TDI2 (UniProtKB/TrEMBL), A0A8D1TQZ5 (UniProtKB/TrEMBL), A0A8D0ME60 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGVRNLTVSSASSNTCNDTIDDFRNQVYSTLYSMITVVGFFGNGFVLYVLIKTYHEKSAYQVY MINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAI VFPVQNINLITHKKAKIVCIAIWIFVILTSSPFLMSTSYKDEKNNTKCFEPPQDNQAKYHVLVL HYVSLFVGFIIPFVIIIVCYTMIILTLLKNSMKKNISSRKKAIGMIIVVTAAFLISFMPYHIQR TIHLHFLHNDTKHCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRRRLSTFRKHSLSSM TYVPKKKTSLPEKGEEIYKE hide sequence

RefSeq Acc Id:	XP_005673791 ⟸ XM_005673734
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZRT7 (UniProtKB/TrEMBL), A0A4X1TDI2 (UniProtKB/TrEMBL), A0A8D1TQZ5 (UniProtKB/TrEMBL), A0A8D0ME60 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGVRNLTVSSASSNTCNDTIDDFRNQVYSTLYSMITVVGFFGNGFVLYVLIKTYHEKSAYQVY MINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAI VFPVQNINLITHKKAKIVCIAIWIFVILTSSPFLMSTSYKDEKNNTKCFEPPQDNQAKYHVLVL HYVSLFVGFIIPFVIIIVCYTMIILTLLKNSMKKNISSRKKAIGMIIVVTAAFLISFMPYHIQR TIHLHFLHNDTKHCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRRRLSTFRKHSLSSM TYVPKKKTSLPEKGEEIYKE hide sequence

RefSeq Acc Id:	XP_020935158 ⟸ XM_021079499
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZRT7 (UniProtKB/TrEMBL), A0A4X1TDI2 (UniProtKB/TrEMBL), A0A8D1TQZ5 (UniProtKB/TrEMBL), A0A8D0ME60 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGVRNLTVSSASSNTCNDTIDDFRNQVYSTLYSMITVVGFFGNGFVLYVLIKTYHEKSAYQVY MINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAI VFPVQNINLITHKKAKIVCIAIWIFVILTSSPFLMSTSYKDEKNNTKCFEPPQDNQAKYHVLVL HYVSLFVGFIIPFVIIIVCYTMIILTLLKNSMKKNISSRKKAIGMIIVVTAAFLISFMPYHIQR TIHLHFLHNDTKHCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRRRLSTFRKHSLSSM TYVPKKKTSLPEKGEEIYKE hide sequence

RefSeq Acc Id:	XP_020935157 ⟸ XM_021079498
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZRT7 (UniProtKB/TrEMBL), A0A4X1TDI2 (UniProtKB/TrEMBL), A0A8D1TQZ5 (UniProtKB/TrEMBL), A0A8D0ME60 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGVRNLTVSSASSNTCNDTIDDFRNQVYSTLYSMITVVGFFGNGFVLYVLIKTYHEKSAYQVY MINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAI VFPVQNINLITHKKAKIVCIAIWIFVILTSSPFLMSTSYKDEKNNTKCFEPPQDNQAKYHVLVL HYVSLFVGFIIPFVIIIVCYTMIILTLLKNSMKKNISSRKKAIGMIIVVTAAFLISFMPYHIQR TIHLHFLHNDTKHCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRRRLSTFRKHSLSSM TYVPKKKTSLPEKGEEIYKE hide sequence

RefSeq Acc Id:

NP_999294 ⟸ NM_214129

- UniProtKB:

A0A286ZRT7 (UniProtKB/TrEMBL), A0A4X1TDI2 (UniProtKB/TrEMBL), A0A8D1TQZ5 (UniProtKB/TrEMBL), A0A8D0ME60 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDGVRNLTVSSASSNTCNDTIDDFRNQVYSTLYSMITVVGFFGNGFVLYVLIKTYHEKSAYQVY
MINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAI
VFPVQNINLITHKKAKIVCIAIWIFVILTSSPFLMSTSYKDEKNNTKCFEPPQDNQAKYHVLVL
HYVSLFVGFIIPFVIIIVCYTMIILTLLKNSMKKNISSRKKAIGMIIVVTAAFLISFMPYHIQR
TIHLHFLHNDTKHCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRRRLSTFRKHSLSSM
TYVPKKKTSLPEKGEEIYKE

hide sequence

RefSeq Acc Id:

ENSSSCP00000073858 ⟸ ENSSSCT00000077185

RefSeq Acc Id:

ENSSSCP00000034195 ⟸ ENSSSCT00000063423

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000039203	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005007135	UniProtKB/TrEMBL
	ENSSSCG00015003178	UniProtKB/TrEMBL
	ENSSSCG00025070443	UniProtKB/TrEMBL
	ENSSSCG00030000659	UniProtKB/TrEMBL
	ENSSSCG00035044410	UniProtKB/TrEMBL
	ENSSSCG00040001629	UniProtKB/TrEMBL
	ENSSSCG00045012826	UniProtKB/TrEMBL
	ENSSSCG00050076646	UniProtKB/TrEMBL
	ENSSSCG00055002399	UniProtKB/TrEMBL
	ENSSSCG00060070637	UniProtKB/TrEMBL
	ENSSSCG00065070195	UniProtKB/TrEMBL
	ENSSSCG00070008358	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000063423	ENTREZGENE
	ENSSSCT00000063423.1	UniProtKB/TrEMBL
	ENSSSCT00000077185	ENTREZGENE
	ENSSSCT00000077185.2	UniProtKB/TrEMBL
	ENSSSCT00005010702.1	UniProtKB/TrEMBL
	ENSSSCT00015004024.1	UniProtKB/TrEMBL
	ENSSSCT00025096712.1	UniProtKB/TrEMBL
	ENSSSCT00030000890.1	UniProtKB/TrEMBL
	ENSSSCT00035058997.1	UniProtKB/TrEMBL
	ENSSSCT00040001920.1	UniProtKB/TrEMBL
	ENSSSCT00045021828.1	UniProtKB/TrEMBL
	ENSSSCT00050105340.1	UniProtKB/TrEMBL
	ENSSSCT00055004547.1	UniProtKB/TrEMBL
	ENSSSCT00055004560.1	UniProtKB/TrEMBL
	ENSSSCT00060096404.1	UniProtKB/TrEMBL
	ENSSSCT00065096384.1	UniProtKB/TrEMBL
	ENSSSCT00070016126.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	CLT1_recept	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Cyst_leuk_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GPCR_Rhodpsn	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	ssc:397242	UniProtKB/Swiss-Prot
NCBI Gene	CYSLTR1	ENTREZGENE
PANTHER	CYSTEINYL LEUKOTRIENE RECEPTOR 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	CYSLT1RECPTR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CYSLTRECPTR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GPCRRHODOPSN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A286ZRT7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TDI2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0ME60	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1TQZ5	ENTREZGENE, UniProtKB/TrEMBL
	CLTR1_PIG	UniProtKB/Swiss-Prot, ENTREZGENE
VGNC ID	VGNC:87132	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)