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Gene: ECPAS (Ecm29 proteasome adaptor and scaffold) Chlorocebus sabaeus

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Symbol:

ECPAS

Name:

Ecm29 proteasome adaptor and scaffold

RGD ID:

18781519

Description:

ENCODES a protein that exhibits molecular adaptor activity (inferred); proteasome binding (inferred); INVOLVED IN ERAD pathway (inferred); proteasome assembly (inferred); FOUND IN trans-Golgi network (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

KIAA0368; proteasome adapter and scaffold protein ECM29; proteasome-associated protein ECM29 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	28,076,607 - 28,201,556 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	28,087,447 - 28,203,848 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	14,575,484 - 14,701,030 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ERAD pathway (IEA)

proteasome assembly (IEA)

Cellular Component

centrosome (IEA)

COPII-coated ER to Golgi transport vesicle (IEA)

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

early endosome (IEA)

endocytic vesicle (IEA)

endoplasmic reticulum (IEA)

late endosome (IEA)

multivesicular body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

proteasome complex (IEA)

trans-Golgi network (ISO)

Molecular Function

molecular adaptor activity (IEA)

proteasome binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ECPAS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	28,076,607 - 28,201,556 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	28,087,447 - 28,203,848 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	14,575,484 - 14,701,030 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ECPAS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	111,360,685 - 111,484,383 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	111,360,685 - 111,484,745 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	114,122,965 - 114,246,663 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	113,162,794 - 113,286,846 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	84,622,093 - 84,746,150 (-)	NCBI		Celera
Cytogenetic Map	9	q31.3	NCBI
HuRef	9	83,721,967 - 83,846,182 (-)	NCBI		HuRef
CHM1_1	9	114,269,444 - 114,393,512 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	123,532,059 - 123,655,812 (-)	NCBI		T2T-CHM13v2.0

Ecpas
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	58,797,234 - 58,917,748 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	58,798,911 - 58,912,749 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	58,797,234 - 58,917,748 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	58,798,911 - 58,912,749 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	58,812,902 - 58,925,597 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	58,894,084 - 59,006,779 (-)	NCBI		MGSCv36	mm8
Celera	4	58,712,861 - 58,825,593 (-)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	32.35	NCBI

Ecpas
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	78,398,449 - 78,509,077 (-)	NCBI		GRCr8
mRatBN7.2	5	73,601,745 - 73,714,026 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	73,604,533 - 73,713,860 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	5	75,928,510 - 76,040,771 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	75,931,293 - 76,039,760 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	80,073,657 - 80,184,763 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	76,827,647 - 76,942,881 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	72,425,077 - 72,537,191 (-)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

Ecpas
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	15,782,453 - 15,890,022 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	15,775,208 - 15,886,101 (+)	NCBI	ChiLan1.0	ChiLan1.0

ECPAS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	27,937,419 - 28,061,698 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	27,939,978 - 28,064,059 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	82,499,075 - 82,623,007 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	110,662,590 - 110,774,511 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	110,662,590 - 110,786,472 (-)	Ensembl	panpan1.1		panPan2

ECPAS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	66,051,414 - 66,141,931 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	66,051,443 - 66,141,802 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	64,462,290 - 64,560,906 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	67,183,925 - 67,282,892 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	67,183,925 - 67,282,889 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	65,702,391 - 65,800,793 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	65,725,419 - 65,824,128 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	66,414,685 - 66,513,468 (-)	NCBI		UU_Cfam_GSD_1.0

Ecpas
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	181,345,187 - 181,460,324 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936559	1,807,753 - 1,921,423 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936559	1,807,768 - 1,918,529 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ECPAS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	252,218,819 - 252,324,928 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	252,221,687 - 252,325,068 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	283,049,989 - 283,120,665 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Ecpas
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	67,650 - 195,122 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	67,558 - 194,653 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ECPAS
2672 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007968435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007968436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037983513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037983525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000010242 ⟹ ENSCSAP00000008339

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	12	28,087,447 - 28,203,848 (+)	Ensembl

RefSeq Acc Id:

XM_007968435 ⟹ XP_007966626

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	28,076,607 - 28,201,556 (+)	NCBI
Vero_WHO_p1.0	NW_023666035	14,575,484 - 14,700,990 (-)	NCBI

Sequence:

show sequence

TGACAGCCGCAGACCTCGGAAAAGGGCGCTCCGGCCCCGCCTAGAGGATTTCCCCCGGCCGCTA
GGGCAGCCTGGGCCCGCTCGGCCCAGCCCCTCACGGACTGCGGCGCGCGGCTCCCCGGGGCCCG
GCCCGCCGAACGCCTCACTCCACAGCCCTCACCTCGCGGCGCCGAGTGTAGCGTCCGCGGCATG
GAGACCGGCTCCGACTCAGATTCTTTATACAATTGCATTTGTACGAGTGGATGAACATACCATT
GGTGATCCCGAGGATTTTTGTCAAGATTGGATAAACCATGTATCACATTGATTGTAGAGATCAG
CTTGAACGAGTCTTTTTACGACTTGGCCATGCTGAAACAGATGAACAATTACAGAATATTATAT
CTAAATTCCTTCCTCCTGTTTTGCTCAAACTGTCTAGCACCCAAGAAGGAGTACGTAAAAAGGT
AATGGAACTGCTGGTGCATCTGAATAAACGTATAAAAAGCCGCCCCAAAATACAACTTCCAGTA
GAGACACTGTTGGTTCAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACAAATTTTACTATAA
TTTATGTTAAAATGGGCTATCCTCGCCTACCAGTGGAAAAACAATGTGAACTGGCCCCTACGCT
TCTTACTGCCATGGAAGGGAAGCCTCAGCCACAGCAGGATAGCTTAATGCATCTTTTAATACCA
ACCCTTTTTCACATGAAATACCCTGTTGAATCATCAAAATCAGCTTCTCCGTTTAATCTTGCTG
AGAAACCAAAGACTGTGCAGCTGCTTTTGGACTTCATGCTAGATGTCCTTCTGATGCCTTATGG
TTACGTGTTAAATGAATCCCAGAGTCGCCAAAATTCATCTTCAGCACAGGGTTCTTCTTCAAAC
AGTGGAGGAGGTTCTGGAATTCCACAGCCTCCTCCGGGAATGAGCTTTTATGCAGCTAAACGAG
TTATTGGTGATAACCCATGGACACCTGAACAATTGGAACAGTGCAAATTGGGAATCGTGAAATT
CATAGAAGCTGAACAGGTGCCTGAACTCGAGGCTGTTCTCCATTTGGTGATTGCTTCTAGTGAC
ACACGCCACAGTGTGGCAACGGCAGCAGACCTGGAGTTGAAAAGCAAACAGAGCTTAATTGACT
GGAATAATCCTGCCATCATTAATAAGATGTACAAGGTGTACCTTGGAGATATACCACTGAAGAC
AAAAGAGGGTGCAGTTCTGAAGCCAGAGTTGAAAAGGGACCCTGTCAGTACGAGAGTCAAGTTA
AAGATTGTCCCCCATCTCCTCCGCTCTAGACAAGCTGCTGAAACGTTCCCAGCCAACATTCAGG
TGGTGTATGATGGACTCTTTGGTACAAATACAAATTCAAAGTTAAGAACATTATCCCTGCAATT
TGTGCATCATATTTGTATAACCTGTCCAGAAATCAAGATTAAGCCATTAGGTCCAATGCTTTTG
AATGGCCTCACCAAGCTAATCAATGAATACAAAGAGGACCCTAAACTACTGTCAATGGCATATT
CAGCTGTTGGAAAACTCTCCAGTCGAATGCCGCATTTATTCACTAAGGATATAGCGCTTGTGCA
GCAGCTTTTTGAAGCCCTATGTAAGGAAGAGCCTGAGACTCGACTTGCTATTCAAGAAGCTTTG
TCTATGATGGTTGGAGCATACAGTACTTTGGAAGGGGCACAGCGAACTCTCATGGAGGCACTTG
TGGCTTCGTACTTAATAAAGCCTGAGGTTCAAGTTCGACAAGTGGCTGTGAAATTTGCCAGCAC
TGTGTTTCCCTCAGATCATATCCCTTCCAGATATTTGCTGCTACTGGCTGCAGGAGATCCACGT
GAAGAAGTTCATGGAGAAGCACAACGCGTGTTAAGGTGTCTTCCAGGTAGAAACAGAAAAGAAA
GTACTTCTGAGCAGATGCCTTCCTTCCCAGAAATGGTATATTACATCCAAGAAAAGGCTTCTCA
TCGAATGAAAACTCCAGTCAAGTACATGACCGGGACCACTGTCCTTCCATTTAACCCAGCAGCC
TTTGGAGAGATCGTTCTGTACTTGCGCATGTGCCTCGCGCACAGTGCGGGGGTGGTGCCCACCT
CTCAGAGTTTGGCTGATATGCAGGATCATGCTCCAGCCATTGGACGCTACATACGGACTTTAAT
GTCAGGCGGACAGACGGCACCCTCATCATCTTCTAACAAGAGTGGGGAAACTAACCCTGTCCAG
ATCTACATTGGCCTGCTTCAGCAGCTGTTAGCAGGTGTTGGAGGTTTGCCGGTTATGTACTGTC
TATTGGAAGCTGTGTCAGTGTATCCAGAAAAGCTGGCTACCAAATTTGTAGACAAAACAGAATG
GATAAAGAGTCTGATGAATAGCAGTAAAGAAGAAATGCGTGAATTGGCAGCATTGTTTTATTCT
GTGGTGGTATCAACAGTGTCGGGGAATGAGTTGAAATCAATGATAGAACAGCTTATAAAGACTA
CAAAAGACAATCACAGCCCGGAGATACAGCATGGATCCTTGCTTGCATTGGGATTCACGGTGGG
AAGGTATTTGGCTAAAAAGAAAATGAGAATGGCAGAGCAACAAGACCTGGAGAGAAATGCTGAC
ACCCTCCCTGATCAAGAGGAACTCATTCAGAGTGCTACAGAAACAATAGGCTCATTTTTGGACA
GTACATCACCCCTCCTGGCAATTGCTGCCTGCACAGCCCTGGGTGAAATAGGCAGAAATGGTCC
ACTTCCAATCCCCAGTGAGGGATCTGGCTTTACCAAATTGCATCTTGTAGAAAGCTTACTAAGT
AGAATACCTTCCAGTAAAGAAACAAATAAGATGAAAGAACGAGCAATCCAAACACTGGGATATT
TTCCAGTTGGGGATGGAGATTTTCCTCACCAGAAACTCCTCTTGCAAGGTCTGATGGATTCTGT
GGAGGCCAAGCAGATAGAACTTCAGTTCACTATTGGCGAAGCCATTACCAGCGCTGCAATAGGA
ACTAGTTCTGTGGCTGCCCGAGATGCCTGGCTAGTGACTGAAGAGGAATATACTCCTCCTGCTG
GAGCCAAAGTGAATGATGTGGTTCCATGGGTGTTGGATGTGATTTTAAATAAACATATCATCAG
CCCCAACCCACATGTGAGGCAAGCAGCCTGCATCTGGCTCCTTTCCCTTGTGAGGAAGCTAAGT
ACCCACAAAGAAGTGAAGTCTCATCTTAAAGAAATTCAAAGTGCGTTTGTTTCAGTTCTATCAG
AAAATGATGAACTTAGCCAAGATGTTGCATCAAAGGGCCTTGGGTTGGTTTATGAACTAGGCAA
TGAACAAGATCAACAGGAATTGGTTTCTACACTTGTAGAAACACTTATGACTGGCAAAAGAGTT
AAACATGAAGTTTCTGGAGAAACAGTGGTATTTCAAGGGGGAGCACTTGGCAAAACGCCAGATG
GTCAGGGCCTTTCTACCTACAAGGAACTTTGTTCTCTGGCAAGTGATCTTAGCCAGCCAGATCT
GGTGTATAAATTTATGAATTTAGCCAACCATCATGCAATGTGGAACTCTAGGAAGGGTGCTGCT
TTTGGTTTTAATGTAATTGCTACCAGAGCTGGAGAGCAGCTGGCTCCTTTTCTGCCTCAGCTAG
TTCCTCGACTTTATCGTTACCAGTTTGATCCCAACCTTGGCATTCGACAGGCCATGACAAGTAT
TTGGAATGCGTTGGTCACTGACAAATCCATGGTGGATAAATATTTGAAAGAAATTCTTCAAGAT
TTGGTTAAGAACCTTACAAGCAATATGTGGCGAGTTCGAGAATCCAGCTGTTTAGCTTTGAATG
ATTTATTGAGAGGAAGACCCTTAGATGACATCATTGATAAACTTCCAGAAATTTGGGAAACGCT
TTTTAGAGTACAAGATGATATCAAGGAATCTGTACGAAAAGCAGCAGAACTAGCTCTGAAAACT
CTGAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCG
CTGCCCTTCTGCCTTGCCTTCTGGACAAAGGAATGATGAGCCCCGTGACGGAAGTTCGAGCCCT
CAGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAACCACATGCACCA
AAACTCATTCCAGCTCTGCTAGAGTCCTTGAGTGTATTGGAGCCCCAAGTTCTCAATTATTTGA
GCCTCCGGGCAACAGAGCAAGAAAAGGCTGCGATGGATAGTGCTCGGCTTAGTGCTGCCAAATC
CTCTCCGATGATGGAAACAATCAACATGTGCCTGCAATATCTTGATGTGTCGGTGCTGGGCGAG
CTAGTTCCTAGGTTGTGTGAACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTG
CCAGTGTCATTGTGTCATTAACTACTCAGTGTCCTCAGGACCTAACACCTTACTCAGGTAAACT
TATGAGTGCTTTGCTTAGTGGCCTGACAGATCGGAACAGTGTGATTCAGAAATCTTGTGCATTT
GCCATGGGCCATTTAGTTCGGACTTCACGGGATAGCAGCACTGAAAAACTCCTGCAGAAGCTCA
GTGGGTGGTATATGGAGAAAGAAGAACCTATCTACAAGACCTCTTGTGCTTTGACTATTCATGC
TATTGGACGATACAGCCCTGATGTGTTAAAGAATCATGCAAAAGAAGTCCTGCCTCTGGCATTT
TTAGGCATGCATGAAATTGCTGATGAGGAAAAATCTGAAAAAGAAGAATGTAATTTATGGACTG
AAGTGTGGCAGGAAAACGTACCTGGTTCTTTTGGGGGCATTCGATTATACCTTCAGGAGTTAAT
TACTATTACCCAGAAGGCTTTGCAGTCTCAGTCTTGGAAAATGAAAGCCCAGGGTGCAATTGCC
ATGGCATCAATTGCAAAGCAAACTAGCTCTCTAGTACCTCCATATCTCGGAATGATACTGACCG
CCTTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAAGGAAGAGCTGTTGAAAGCCATTGC
TTGTGTGGTGACGGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCAATCAACCCAGCACAAAT
GAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATCTCAAATACAAGATTGTAGCAA
TCAGCTGTGCAGCTGATGTCTTGAAGGCCACCAAAGAAGACAGATTCCAGGAGTTTTCTGACAT
TGTCATACCTCTCATCAAGAAGAATTCACTTGAAAGTAGTGGGGTCCAGACAACCAAAAATGAA
GATGAGAATGAGAAGGAAAAGGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGG
GCAAAGCCTGGCCCCGAAACGCGGAGACCCAACGTTGTTATCGTCAGGAGCTGTGCAAACTGAT
GTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCAATCAATGAATGCC
TTTTTTCAGGGGTTAATGCTTTTGGAAGAAGAATATGCAGATCCTGAGGCTTTGGCTGAAATTC
TGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAATAAGACCTATTCATCTGTGAGAAC
AGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATCTAAACAGTGGGAATGT
TTGACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCAGACAGCAGAC
CTGAACTGCAGGAGAAAGCAGCGTTACTGAAGAAAACACTTGAAAATCTGGAATAAATTAGAAG
GGGAAGAAACAAACAAGTGCCATGTTCATTGGGTGTTGAAATGGTGGTGTTCTTTGAAAAACCA
AGTGGGGAAGAGTAAAGATTAATCTGTAGCATGCATCATTCCTTGGCTGAAATAAAAAGAAAAA
GCCTTAAATTTTGTTCCTTATTAGCTTTATTTTACTTTATGTTTTTAAAGTATCTGGGCTGAGT
GAGCTTAATGGAACCTTGGATGTTTGAGGGGTGATTGTAAAGGAAACTGGCAGAAATAGTTGTT
AAAAGAGTACAAGCTATTATTAAAGGAATTAATAGACAAAGTTGCAGAGCAAGCTGGATAAAAA
TCTTAGAACTGCATTCAAATTAGTTATTTCAGGAAGGGGCCTGTAAATAACTTGTTTTAACCTT
CCTCTTAAACCTGAAGAAATAGGAAGCTGTGTCATCTCAGAGGCTTTCTGAGGCCTGTGCCAAA
ATCAGAACCCAGGTGTTTAATGTTCTGCCCTGGATACTTTCTTTTACAGCCATCTGCCAAATCA
GTGCTAACCCTGGCCCACCCAAGAAACTTCCAAGTTGAGGTATGTTTAGGGCGGCACACAACAG
CCCTTGTGCCAGAACTAAAGTGACCCTTATCGTTGGGTTTCCGAAAGTCAGAAGCTGAACATTG
TCTTGTGTGTTTAGATGGTTGATTTGGAGAAAATGATTGTTTAGCATCTTTACAGATGGAGAGG
ACAGATTCAGTCTCATTAGGATAATTCAAATCGTCTTCCTTTTACAGGTGGGTAAAGTAGATTA
GGACAAGATCACACATTCTATCGGTGTCTGTGGCTGCATATTTTGCAAAACCAGAAACAAAATC
ACAGACTGCCTCAAAACTGTAATGACAACATAAAATTTCTGTTCACTTTTATGCTACCAGTATG
ACTTTATAGGGGAGAAGGAACGCCTTTTAATTAGCCACCTGGGAATTACTCTTTTAAAAAATGC
CTTTTCTCAAAATAACATGATACCACTCCAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTC
CTTCTGTTGCGCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAAAACAAGTAAAGCCTTAGT
GTTTATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGATTGGTTTACAT
TCAATACTGATCCTTATTGACATTAACACCAGGAATCTCCATGTTTATTATTTTTCGTGGAAAC
TCCATGTTTATTATTTTTGAGGGTCTCTATTGACCGATGTATTTCAAACTTTTTTGACTGCAAG
TCATAATAAAAATAACTTTTTACATCACGA

hide sequence

RefSeq Acc Id:

XM_007968436 ⟹ XP_007966627

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	28,076,607 - 28,201,556 (+)	NCBI
Vero_WHO_p1.0	NW_023666035	14,575,484 - 14,701,030 (-)	NCBI

Sequence:

show sequence

TGACAGCCGCAGACCTCGGAAAAGGGCGCTCCGGCCCCGCCTAGAGGATTTCCCCCGGCCGCTA
GGGCAGCCTGGGCCCGCTCGGCCCAGCCCCTCACGGACTGCGGCGCGCGGCTCCCCGGGGCCCG
GCCCGCCGAACGCCTCACTCCACAGCCCTCACCTCGCGGCGCCGAGTGTAGCGTCCGCGGCATG
GAGACCGGCTCCGACTCAGATCAGCTTGAACGAGTCTTTTTACGACTTGGCCATGCTGAAACAG
ATGAACAATTACAGAATATTATATCTAAATTCCTTCCTCCTGTTTTGCTCAAACTGTCTAGCAC
CCAAGAAGGAGTACGTAAAAAGGTAATGGAACTGCTGGTGCATCTGAATAAACGTATAAAAAGC
CGCCCCAAAATACAACTTCCAGTAGAGACACTGTTGGTTCAGTACCAGGACCCTGCTGCAGTTT
CCTTTGTCACAAATTTTACTATAATTTATGTTAAAATGGGCTATCCTCGCCTACCAGTGGAAAA
ACAATGTGAACTGGCCCCTACGCTTCTTACTGCCATGGAAGGGAAGCCTCAGCCACAGCAGGAT
AGCTTAATGCATCTTTTAATACCAACCCTTTTTCACATGAAATACCCTGTTGAATCATCAAAAT
CAGCTTCTCCGTTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCTTTTGGACTTCATGCT
AGATGTCCTTCTGATGCCTTATGGTTACGTGTTAAATGAATCCCAGAGTCGCCAAAATTCATCT
TCAGCACAGGGTTCTTCTTCAAACAGTGGAGGAGGTTCTGGAATTCCACAGCCTCCTCCGGGAA
TGAGCTTTTATGCAGCTAAACGAGTTATTGGTGATAACCCATGGACACCTGAACAATTGGAACA
GTGCAAATTGGGAATCGTGAAATTCATAGAAGCTGAACAGGTGCCTGAACTCGAGGCTGTTCTC
CATTTGGTGATTGCTTCTAGTGACACACGCCACAGTGTGGCAACGGCAGCAGACCTGGAGTTGA
AAAGCAAACAGAGCTTAATTGACTGGAATAATCCTGCCATCATTAATAAGATGTACAAGGTGTA
CCTTGGAGATATACCACTGAAGACAAAAGAGGGTGCAGTTCTGAAGCCAGAGTTGAAAAGGGAC
CCTGTCAGTACGAGAGTCAAGTTAAAGATTGTCCCCCATCTCCTCCGCTCTAGACAAGCTGCTG
AAACGTTCCCAGCCAACATTCAGGTGGTGTATGATGGACTCTTTGGTACAAATACAAATTCAAA
GTTAAGAACATTATCCCTGCAATTTGTGCATCATATTTGTATAACCTGTCCAGAAATCAAGATT
AAGCCATTAGGTCCAATGCTTTTGAATGGCCTCACCAAGCTAATCAATGAATACAAAGAGGACC
CTAAACTACTGTCAATGGCATATTCAGCTGTTGGAAAACTCTCCAGTCGAATGCCGCATTTATT
CACTAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCTATGTAAGGAAGAGCCTGAGACT
CGACTTGCTATTCAAGAAGCTTTGTCTATGATGGTTGGAGCATACAGTACTTTGGAAGGGGCAC
AGCGAACTCTCATGGAGGCACTTGTGGCTTCGTACTTAATAAAGCCTGAGGTTCAAGTTCGACA
AGTGGCTGTGAAATTTGCCAGCACTGTGTTTCCCTCAGATCATATCCCTTCCAGATATTTGCTG
CTACTGGCTGCAGGAGATCCACGTGAAGAAGTTCATGGAGAAGCACAACGCGTGTTAAGGTGTC
TTCCAGGTAGAAACAGAAAAGAAAGTACTTCTGAGCAGATGCCTTCCTTCCCAGAAATGGTATA
TTACATCCAAGAAAAGGCTTCTCATCGAATGAAAACTCCAGTCAAGTACATGACCGGGACCACT
GTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATCGTTCTGTACTTGCGCATGTGCCTCGCGC
ACAGTGCGGGGGTGGTGCCCACCTCTCAGAGTTTGGCTGATATGCAGGATCATGCTCCAGCCAT
TGGACGCTACATACGGACTTTAATGTCAGGCGGACAGACGGCACCCTCATCATCTTCTAACAAG
AGTGGGGAAACTAACCCTGTCCAGATCTACATTGGCCTGCTTCAGCAGCTGTTAGCAGGTGTTG
GAGGTTTGCCGGTTATGTACTGTCTATTGGAAGCTGTGTCAGTGTATCCAGAAAAGCTGGCTAC
CAAATTTGTAGACAAAACAGAATGGATAAAGAGTCTGATGAATAGCAGTAAAGAAGAAATGCGT
GAATTGGCAGCATTGTTTTATTCTGTGGTGGTATCAACAGTGTCGGGGAATGAGTTGAAATCAA
TGATAGAACAGCTTATAAAGACTACAAAAGACAATCACAGCCCGGAGATACAGCATGGATCCTT
GCTTGCATTGGGATTCACGGTGGGAAGGTATTTGGCTAAAAAGAAAATGAGAATGGCAGAGCAA
CAAGACCTGGAGAGAAATGCTGACACCCTCCCTGATCAAGAGGAACTCATTCAGAGTGCTACAG
AAACAATAGGCTCATTTTTGGACAGTACATCACCCCTCCTGGCAATTGCTGCCTGCACAGCCCT
GGGTGAAATAGGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCTTTACCAAATTG
CATCTTGTAGAAAGCTTACTAAGTAGAATACCTTCCAGTAAAGAAACAAATAAGATGAAAGAAC
GAGCAATCCAAACACTGGGATATTTTCCAGTTGGGGATGGAGATTTTCCTCACCAGAAACTCCT
CTTGCAAGGTCTGATGGATTCTGTGGAGGCCAAGCAGATAGAACTTCAGTTCACTATTGGCGAA
GCCATTACCAGCGCTGCAATAGGAACTAGTTCTGTGGCTGCCCGAGATGCCTGGCTAGTGACTG
AAGAGGAATATACTCCTCCTGCTGGAGCCAAAGTGAATGATGTGGTTCCATGGGTGTTGGATGT
GATTTTAAATAAACATATCATCAGCCCCAACCCACATGTGAGGCAAGCAGCCTGCATCTGGCTC
CTTTCCCTTGTGAGGAAGCTAAGTACCCACAAAGAAGTGAAGTCTCATCTTAAAGAAATTCAAA
GTGCGTTTGTTTCAGTTCTATCAGAAAATGATGAACTTAGCCAAGATGTTGCATCAAAGGGCCT
TGGGTTGGTTTATGAACTAGGCAATGAACAAGATCAACAGGAATTGGTTTCTACACTTGTAGAA
ACACTTATGACTGGCAAAAGAGTTAAACATGAAGTTTCTGGAGAAACAGTGGTATTTCAAGGGG
GAGCACTTGGCAAAACGCCAGATGGTCAGGGCCTTTCTACCTACAAGGAACTTTGTTCTCTGGC
AAGTGATCTTAGCCAGCCAGATCTGGTGTATAAATTTATGAATTTAGCCAACCATCATGCAATG
TGGAACTCTAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCTGGAGAGCAGC
TGGCTCCTTTTCTGCCTCAGCTAGTTCCTCGACTTTATCGTTACCAGTTTGATCCCAACCTTGG
CATTCGACAGGCCATGACAAGTATTTGGAATGCGTTGGTCACTGACAAATCCATGGTGGATAAA
TATTTGAAAGAAATTCTTCAAGATTTGGTTAAGAACCTTACAAGCAATATGTGGCGAGTTCGAG
AATCCAGCTGTTTAGCTTTGAATGATTTATTGAGAGGAAGACCCTTAGATGACATCATTGATAA
ACTTCCAGAAATTTGGGAAACGCTTTTTAGAGTACAAGATGATATCAAGGAATCTGTACGAAAA
GCAGCAGAACTAGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAG
GAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGACAAAGGAATGATGAG
CCCCGTGACGGAAGTTCGAGCCCTCAGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGA
GCCATGTTGAAACCACATGCACCAAAACTCATTCCAGCTCTGCTAGAGTCCTTGAGTGTATTGG
AGCCCCAAGTTCTCAATTATTTGAGCCTCCGGGCAACAGAGCAAGAAAAGGCTGCGATGGATAG
TGCTCGGCTTAGTGCTGCCAAATCCTCTCCGATGATGGAAACAATCAACATGTGCCTGCAATAT
CTTGATGTGTCGGTGCTGGGCGAGCTAGTTCCTAGGTTGTGTGAACTGATCAGAAGTGGTGTAG
GTCTTGGAACTAAGGGTGGCTGTGCCAGTGTCATTGTGTCATTAACTACTCAGTGTCCTCAGGA
CCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTTAGTGGCCTGACAGATCGGAACAGT
GTGATTCAGAAATCTTGTGCATTTGCCATGGGCCATTTAGTTCGGACTTCACGGGATAGCAGCA
CTGAAAAACTCCTGCAGAAGCTCAGTGGGTGGTATATGGAGAAAGAAGAACCTATCTACAAGAC
CTCTTGTGCTTTGACTATTCATGCTATTGGACGATACAGCCCTGATGTGTTAAAGAATCATGCA
AAAGAAGTCCTGCCTCTGGCATTTTTAGGCATGCATGAAATTGCTGATGAGGAAAAATCTGAAA
AAGAAGAATGTAATTTATGGACTGAAGTGTGGCAGGAAAACGTACCTGGTTCTTTTGGGGGCAT
TCGATTATACCTTCAGGAGTTAATTACTATTACCCAGAAGGCTTTGCAGTCTCAGTCTTGGAAA
ATGAAAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAAAGCAAACTAGCTCTCTAGTACCTC
CATATCTCGGAATGATACTGACCGCCTTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAA
GGAAGAGCTGTTGAAAGCCATTGCTTGTGTGGTGACGGCTTGCAGTGCAGAGCTGGAAAAGTCT
GTGCCCAATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGA
ATCTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCTGATGTCTTGAAGGCCACCAAAGAAGA
CAGATTCCAGGAGTTTTCTGACATTGTCATACCTCTCATCAAGAAGAATTCACTTGAAAGTAGT
GGGGTCCAGACAACCAAAAATGAAGATGAGAATGAGAAGGAAAAGGAGCTCCAGCTGGAATATC
TGCTGGGTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCCCGAAACGCGGAGACCCAACGTTGTTA
TCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCAGCTA
GGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTGGAAGAAGAATATGCAG
ATCCTGAGGCTTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAA
TAAGACCTATTCATCTGTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTT
GAAGAATCTAAACAGTGGGAATGTTTGACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAG
CTACTATGGAGCCAGACAGCAGACCTGAACTGCAGGAGAAAGCAGCGTTACTGAAGAAAACACT
TGAAAATCTGGAATAAATTAGAAGGGGAAGAAACAAACAAGTGCCATGTTCATTGGGTGTTGAA
ATGGTGGTGTTCTTTGAAAAACCAAGTGGGGAAGAGTAAAGATTAATCTGTAGCATGCATCATT
CCTTGGCTGAAATAAAAAGAAAAAGCCTTAAATTTTGTTCCTTATTAGCTTTATTTTACTTTAT
GTTTTTAAAGTATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGATTGTAA
AGGAAACTGGCAGAAATAGTTGTTAAAAGAGTACAAGCTATTATTAAAGGAATTAATAGACAAA
GTTGCAGAGCAAGCTGGATAAAAATCTTAGAACTGCATTCAAATTAGTTATTTCAGGAAGGGGC
CTGTAAATAACTTGTTTTAACCTTCCTCTTAAACCTGAAGAAATAGGAAGCTGTGTCATCTCAG
AGGCTTTCTGAGGCCTGTGCCAAAATCAGAACCCAGGTGTTTAATGTTCTGCCCTGGATACTTT
CTTTTACAGCCATCTGCCAAATCAGTGCTAACCCTGGCCCACCCAAGAAACTTCCAAGTTGAGG
TATGTTTAGGGCGGCACACAACAGCCCTTGTGCCAGAACTAAAGTGACCCTTATCGTTGGGTTT
CCGAAAGTCAGAAGCTGAACATTGTCTTGTGTGTTTAGATGGTTGATTTGGAGAAAATGATTGT
TTAGCATCTTTACAGATGGAGAGGACAGATTCAGTCTCATTAGGATAATTCAAATCGTCTTCCT
TTTACAGGTGGGTAAAGTAGATTAGGACAAGATCACACATTCTATCGGTGTCTGTGGCTGCATA
TTTTGCAAAACCAGAAACAAAATCACAGACTGCCTCAAAACTGTAATGACAACATAAAATTTCT
GTTCACTTTTATGCTACCAGTATGACTTTATAGGGGAGAAGGAACGCCTTTTAATTAGCCACCT
GGGAATTACTCTTTTAAAAAATGCCTTTTCTCAAAATAACATGATACCACTCCAAGTAAATCAT
TGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCGCATGCCCCTGCCTGAAAGTGTAGGGTAAG
AGGAAAAACAAGTAAAGCCTTAGTGTTTATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATT
CCAGAGCAGAAGATTGGTTTACATTCAATACTGATCCTTATTGACATTAACACCAGGAATCTCC
ATGTTTATTATTTTTCGTGGAAACTCCATGTTTATTATTTTTGAGGGTCTCTATTGACCGATGT
ATTTCAAACTTTTTTGACTGCAAGTCATAATAAAAATAACTTTTTACATCACGA

hide sequence

RefSeq Acc Id:

XM_037983513 ⟹ XP_037839441

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666035	14,575,484 - 14,700,477 (-)	NCBI

RefSeq Acc Id:

XM_037983525 ⟹ XP_037839453

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666035	14,575,484 - 14,700,476 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007966626	(Get FASTA)	NCBI Sequence Viewer
	XP_007966627	(Get FASTA)	NCBI Sequence Viewer
	XP_037839441	(Get FASTA)	NCBI Sequence Viewer
	XP_037839453	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000008339
	ENSCSAP00000008339.1

RefSeq Acc Id:	XP_007966626 ⟸ XM_007968435
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RIA0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007966627 ⟸ XM_007968436
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCSAP00000008339 ⟸ ENSCSAT00000010242

RefSeq Acc Id:	XP_037839441 ⟸ XM_037983513
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_037839453 ⟸ XM_037983525
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RIA0 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000012157	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000010242.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Ecm29	UniProtKB/TrEMBL
KEGG Report	csab:103219018	UniProtKB/TrEMBL
NCBI Gene	ECPAS	ENTREZGENE
PANTHER	PTHR23346:SF19	UniProtKB/TrEMBL
	TRANSLATIONAL ACTIVATOR GCN1-RELATED	UniProtKB/TrEMBL
Pfam	Ecm29	UniProtKB/TrEMBL
	Vac14_Fab1_bd	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A0D9RIA0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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