ECPAS (Ecm29 proteasome adaptor and scaffold) - Rat Genome Database

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Gene: ECPAS (Ecm29 proteasome adaptor and scaffold) Canis lupus familiaris
Analyze
Symbol: ECPAS
Name: Ecm29 proteasome adaptor and scaffold
RGD ID: 12112002
Description: ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN centrosome (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasmic vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: KIAA0368; KIAA0368 ortholog; proteasome adapter and scaffold protein ECM29; proteasome-associated protein ECM29 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11166,051,414 - 66,141,931 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1166,051,443 - 66,141,802 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1164,462,290 - 64,560,906 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01167,183,925 - 67,282,892 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1167,183,925 - 67,282,889 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11165,702,391 - 65,800,793 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01165,725,419 - 65,824,128 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01166,414,685 - 66,513,468 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ECPAS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11166,051,414 - 66,141,931 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1166,051,443 - 66,141,802 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1164,462,290 - 64,560,906 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01167,183,925 - 67,282,892 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1167,183,925 - 67,282,889 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11165,702,391 - 65,800,793 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01165,725,419 - 65,824,128 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01166,414,685 - 66,513,468 (-)NCBIUU_Cfam_GSD_1.0
ECPAS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389111,360,685 - 111,484,383 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9111,360,685 - 111,484,745 (-)EnsemblGRCh38hg38GRCh38
GRCh379114,122,965 - 114,246,663 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369113,162,794 - 113,286,846 (-)NCBINCBI36Build 36hg18NCBI36
Celera984,622,093 - 84,746,150 (-)NCBICelera
Cytogenetic Map9q31.3NCBI
HuRef983,721,967 - 83,846,182 (-)NCBIHuRef
CHM1_19114,269,444 - 114,393,512 (-)NCBICHM1_1
T2T-CHM13v2.09123,532,059 - 123,655,812 (-)NCBIT2T-CHM13v2.0
Ecpas
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39458,797,234 - 58,917,748 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl458,798,911 - 58,912,749 (-)EnsemblGRCm39 Ensembl
GRCm38458,797,234 - 58,917,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl458,798,911 - 58,912,749 (-)EnsemblGRCm38mm10GRCm38
MGSCv37458,812,902 - 58,925,597 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36458,894,084 - 59,006,779 (-)NCBIMGSCv36mm8
Celera458,712,861 - 58,825,593 (-)NCBICelera
Cytogenetic Map4B3NCBI
cM Map432.35NCBI
Ecpas
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8578,398,449 - 78,509,077 (-)NCBIGRCr8
mRatBN7.2573,601,745 - 73,714,026 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl573,604,533 - 73,713,860 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0575,928,510 - 76,040,771 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl575,931,293 - 76,039,760 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0580,073,657 - 80,184,763 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4576,827,647 - 76,942,881 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera572,425,077 - 72,537,191 (-)NCBICelera
Cytogenetic Map5q24NCBI
Ecpas
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541915,782,453 - 15,890,022 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541915,775,208 - 15,886,101 (+)NCBIChiLan1.0ChiLan1.0
ECPAS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21127,937,419 - 28,061,698 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1927,939,978 - 28,064,059 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0982,499,075 - 82,623,007 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19110,662,590 - 110,774,511 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9110,662,590 - 110,786,472 (-)Ensemblpanpan1.1panPan2
Ecpas
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947181,345,187 - 181,460,324 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365591,807,753 - 1,921,423 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365591,807,768 - 1,918,529 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ECPAS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,218,819 - 252,324,928 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,221,687 - 252,325,068 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21283,049,989 - 283,120,665 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ECPAS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11228,076,607 - 28,201,556 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1228,087,447 - 28,203,848 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603514,575,484 - 14,701,030 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ecpas
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475867,650 - 195,122 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475867,558 - 194,653 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ECPAS
696 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014117916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000004799   ⟹   ENSCAFP00000004445
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1166,051,443 - 66,141,802 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845009567   ⟹   ENSCAFP00845007482
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1167,183,925 - 67,282,264 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845009579   ⟹   ENSCAFP00845007493
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1167,183,925 - 67,281,882 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845009590   ⟹   ENSCAFP00845007501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1167,183,934 - 67,281,939 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845009609   ⟹   ENSCAFP00845007513
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1167,183,976 - 67,282,889 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845009623   ⟹   ENSCAFP00845007520
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1167,188,214 - 67,281,882 (-)Ensembl
RefSeq Acc Id: XM_038490957   ⟹   XP_038346885
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,391 - 65,800,152 (-)NCBI
RefSeq Acc Id: XM_038490958   ⟹   XP_038346886
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,534 - 65,799,779 (-)NCBI
RefSeq Acc Id: XM_038490959   ⟹   XP_038346887
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,534 - 65,800,117 (-)NCBI
RefSeq Acc Id: XM_038490960   ⟹   XP_038346888
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,534 - 65,800,741 (-)NCBI
RefSeq Acc Id: XM_038490961   ⟹   XP_038346889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,534 - 65,800,793 (-)NCBI
RefSeq Acc Id: XM_038490962   ⟹   XP_038346890
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,391 - 65,799,769 (-)NCBI
RefSeq Acc Id: XM_038490963   ⟹   XP_038346891
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11165,702,391 - 65,770,265 (-)NCBI
RefSeq Acc Id: XM_038553093   ⟹   XP_038409021
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,685 - 66,512,827 (-)NCBI
RefSeq Acc Id: XM_038553094   ⟹   XP_038409022
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,828 - 66,512,447 (-)NCBI
RefSeq Acc Id: XM_038553095   ⟹   XP_038409023
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,828 - 66,512,792 (-)NCBI
RefSeq Acc Id: XM_038553096   ⟹   XP_038409024
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,828 - 66,513,416 (-)NCBI
RefSeq Acc Id: XM_038553097   ⟹   XP_038409025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,828 - 66,513,468 (-)NCBI
RefSeq Acc Id: XM_038553098   ⟹   XP_038409026
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,685 - 66,512,437 (-)NCBI
RefSeq Acc Id: XM_038553099   ⟹   XP_038409027
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01166,414,685 - 66,482,809 (-)NCBI
RefSeq Acc Id: XM_038616971   ⟹   XP_038472899
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,419 - 65,823,518 (-)NCBI
RefSeq Acc Id: XM_038616972   ⟹   XP_038472900
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,562 - 65,823,114 (-)NCBI
RefSeq Acc Id: XM_038616973   ⟹   XP_038472901
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,562 - 65,823,454 (-)NCBI
RefSeq Acc Id: XM_038616974   ⟹   XP_038472902
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,562 - 65,824,076 (-)NCBI
RefSeq Acc Id: XM_038616975   ⟹   XP_038472903
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,562 - 65,824,128 (-)NCBI
RefSeq Acc Id: XM_038616976   ⟹   XP_038472904
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,419 - 65,823,103 (-)NCBI
RefSeq Acc Id: XM_038616977   ⟹   XP_038472905
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01165,725,419 - 65,793,363 (-)NCBI
RefSeq Acc Id: XM_038654937   ⟹   XP_038510865
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,290 - 64,560,265 (-)NCBI
RefSeq Acc Id: XM_038654941   ⟹   XP_038510869
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,433 - 64,559,883 (-)NCBI
RefSeq Acc Id: XM_038654946   ⟹   XP_038510874
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,433 - 64,560,230 (-)NCBI
RefSeq Acc Id: XM_038654952   ⟹   XP_038510880
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,433 - 64,560,854 (-)NCBI
RefSeq Acc Id: XM_038654954   ⟹   XP_038510882
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,433 - 64,560,906 (-)NCBI
RefSeq Acc Id: XM_038654964   ⟹   XP_038510892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,290 - 64,559,872 (-)NCBI
RefSeq Acc Id: XM_038654968   ⟹   XP_038510896
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1164,462,290 - 64,530,344 (-)NCBI
RefSeq Acc Id: XM_038682428   ⟹   XP_038538356
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,183,925 - 67,282,251 (-)NCBI
RefSeq Acc Id: XM_038682429   ⟹   XP_038538357
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,184,068 - 67,281,871 (-)NCBI
RefSeq Acc Id: XM_038682430   ⟹   XP_038538358
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,184,068 - 67,282,216 (-)NCBI
RefSeq Acc Id: XM_038682431   ⟹   XP_038538359
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,184,068 - 67,282,840 (-)NCBI
RefSeq Acc Id: XM_038682432   ⟹   XP_038538360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,184,068 - 67,282,892 (-)NCBI
RefSeq Acc Id: XM_038682433   ⟹   XP_038538361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,183,925 - 67,281,861 (-)NCBI
RefSeq Acc Id: XM_038682434   ⟹   XP_038538362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01167,183,925 - 67,252,067 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038346885 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346886 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346887 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346888 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346889 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346890 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346891 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409021 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409022 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409023 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409024 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409025 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409026 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409027 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472899 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472900 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472901 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472902 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472903 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472904 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472905 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510865 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510869 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510874 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510880 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510882 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510892 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510896 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538356 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538357 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538358 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538359 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538361 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538362 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000004445.5
  ENSCAFP00000067230.1
  ENSCAFP00000073825.1
  ENSCAFP00000074761.1
  ENSCAFP00000075131.1
  ENSCAFP00030014022.1
  ENSCAFP00030014307.1
  ENSCAFP00030014644.1
  ENSCAFP00030014973.1
  ENSCAFP00030015253.1
  ENSCAFP00030015586.1
  ENSCAFP00030015961.1
  ENSCAFP00040021345.1
  ENSCAFP00040021398.1
  ENSCAFP00040021673.1
  ENSCAFP00040021951.1
  ENSCAFP00845007482
  ENSCAFP00845007482.1
  ENSCAFP00845007493
  ENSCAFP00845007493.1
  ENSCAFP00845007501
  ENSCAFP00845007501.1
  ENSCAFP00845007513
  ENSCAFP00845007513.1
  ENSCAFP00845007520.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000004445   ⟸   ENSCAFT00000004799
RefSeq Acc Id: XP_038346885   ⟸   XM_038490957
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346890   ⟸   XM_038490962
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038346891   ⟸   XM_038490963
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038346889   ⟸   XM_038490961
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038346888   ⟸   XM_038490960
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038346887   ⟸   XM_038490959
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038346886   ⟸   XM_038490958
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038472899   ⟸   XM_038616971
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472904   ⟸   XM_038616976
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038472905   ⟸   XM_038616977
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038472903   ⟸   XM_038616975
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038472902   ⟸   XM_038616974
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038472901   ⟸   XM_038616973
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038472900   ⟸   XM_038616972
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038538356   ⟸   XM_038682428
- Peptide Label: isoform X1
- UniProtKB: A0A8I3MZ85 (UniProtKB/TrEMBL),   A0A8C0RG57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538361   ⟸   XM_038682433
- Peptide Label: isoform X4
- UniProtKB: A0A8I3MVJ4 (UniProtKB/TrEMBL),   A0A8C0MS45 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538362   ⟸   XM_038682434
- Peptide Label: isoform X5
- UniProtKB: A0A8C0MTP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538360   ⟸   XM_038682432
- Peptide Label: isoform X3
- UniProtKB: A0A8I3MVJ9 (UniProtKB/TrEMBL),   A0A8C0MS45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538359   ⟸   XM_038682431
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NBG7 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538358   ⟸   XM_038682430
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NBG7 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538357   ⟸   XM_038682429
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NBG7 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510865   ⟸   XM_038654937
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SH10 (UniProtKB/TrEMBL),   A0A8P0TV29 (UniProtKB/TrEMBL),   A0A8C0RG57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510892   ⟸   XM_038654964
- Peptide Label: isoform X4
- UniProtKB: A0A8P0TIQ6 (UniProtKB/TrEMBL),   A0A8C0MS45 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510896   ⟸   XM_038654968
- Peptide Label: isoform X5
- UniProtKB: A0A8C0MTP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510882   ⟸   XM_038654954
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SHJ8 (UniProtKB/TrEMBL),   A0A8P0S8X0 (UniProtKB/TrEMBL),   A0A8C0MS45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510880   ⟸   XM_038654952
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SI86 (UniProtKB/TrEMBL),   A0A8P0PQS3 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510874   ⟸   XM_038654946
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SI86 (UniProtKB/TrEMBL),   A0A8P0PQS3 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510869   ⟸   XM_038654941
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SI86 (UniProtKB/TrEMBL),   A0A8P0PQS3 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409021   ⟸   XM_038553093
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RG57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409026   ⟸   XM_038553098
- Peptide Label: isoform X4
- UniProtKB: A0A8C0MS45 (UniProtKB/TrEMBL),   A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409027   ⟸   XM_038553099
- Peptide Label: isoform X5
- UniProtKB: A0A8C0MTP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409025   ⟸   XM_038553097
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MS45 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409024   ⟸   XM_038553096
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409023   ⟸   XM_038553095
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409022   ⟸   XM_038553094
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RGB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845007513   ⟸   ENSCAFT00845009609
RefSeq Acc Id: ENSCAFP00845007493   ⟸   ENSCAFT00845009579
RefSeq Acc Id: ENSCAFP00845007482   ⟸   ENSCAFT00845009567
RefSeq Acc Id: ENSCAFP00845007520   ⟸   ENSCAFT00845009623
RefSeq Acc Id: ENSCAFP00845007501   ⟸   ENSCAFT00845009590


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000002990 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030008688 UniProtKB/TrEMBL
  ENSCAFG00040012739 UniProtKB/TrEMBL
  ENSCAFG00845005376 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000004799.6 UniProtKB/TrEMBL
  ENSCAFT00000096135.1 UniProtKB/TrEMBL
  ENSCAFT00000098194.1 UniProtKB/TrEMBL
  ENSCAFT00000102277.1 UniProtKB/TrEMBL
  ENSCAFT00000108201.1 UniProtKB/TrEMBL
  ENSCAFT00030016069.1 UniProtKB/TrEMBL
  ENSCAFT00030016384.1 UniProtKB/TrEMBL
  ENSCAFT00030016756.1 UniProtKB/TrEMBL
  ENSCAFT00030017135.1 UniProtKB/TrEMBL
  ENSCAFT00030017466.1 UniProtKB/TrEMBL
  ENSCAFT00030017842.1 UniProtKB/TrEMBL
  ENSCAFT00030018280.1 UniProtKB/TrEMBL
  ENSCAFT00040024565.1 UniProtKB/TrEMBL
  ENSCAFT00040024623.1 UniProtKB/TrEMBL
  ENSCAFT00040024928.1 UniProtKB/TrEMBL
  ENSCAFT00040025256.1 UniProtKB/TrEMBL
  ENSCAFT00845009567 ENTREZGENE
  ENSCAFT00845009567.1 UniProtKB/TrEMBL
  ENSCAFT00845009579 ENTREZGENE
  ENSCAFT00845009579.1 UniProtKB/TrEMBL
  ENSCAFT00845009590 ENTREZGENE
  ENSCAFT00845009590.1 UniProtKB/TrEMBL
  ENSCAFT00845009609 ENTREZGENE
  ENSCAFT00845009609.1 UniProtKB/TrEMBL
  ENSCAFT00845009623.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Ecm29 UniProtKB/TrEMBL
NCBI Gene KIAA0368 ENTREZGENE
PANTHER PTHR23346:SF19 UniProtKB/TrEMBL
  TRANSLATIONAL ACTIVATOR GCN1-RELATED UniProtKB/TrEMBL
Pfam Ecm29 UniProtKB/TrEMBL
  Vac14_Fab1_bd UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A8C0MS45 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MTP1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MV89_CANLF UniProtKB/TrEMBL
  A0A8C0MY01_CANLF UniProtKB/TrEMBL
  A0A8C0MYT5_CANLF UniProtKB/TrEMBL
  A0A8C0RG57 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RGB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SH10 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SHJ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SI86 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SIQ1_CANLF UniProtKB/TrEMBL
  A0A8I3MVJ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MVJ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MZ85 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NBG7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RSM1_CANLF UniProtKB/TrEMBL
  A0A8P0PQS3 ENTREZGENE
  A0A8P0S8X0 ENTREZGENE
  A0A8P0TIQ6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TTJ7_CANLF UniProtKB/TrEMBL
  A0A8P0TV29 ENTREZGENE
UniProt Secondary A0A8P0PQS3 UniProtKB/TrEMBL
  A0A8P0S8X0 UniProtKB/TrEMBL
  A0A8P0TV29 UniProtKB/TrEMBL
VGNC ID VGNC:42346 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-12-26 ECPAS  Ecm29 proteasome adaptor and scaffold  KIAA0368  KIAA0368  Symbol and/or name change 5135510 APPROVED
2017-09-12 KIAA0368  KIAA0368    KIAA0368 ortholog  Symbol and/or name change 5135510 APPROVED