PRRT2 (proline rich transmembrane protein 2)

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Gene: PRRT2 (proline rich transmembrane protein 2) Chlorocebus sabaeus

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Symbol:

PRRT2

Name:

proline rich transmembrane protein 2

RGD ID:

18777576

Description:

ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN neuromuscular process controlling posture (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign familial infantile seizures 2 (ortholog); FOUND IN glutamatergic synapse (ortholog); neuron projection (ortholog); presynaptic membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

proline-rich transmembrane protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	26,838,280 - 26,841,918 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	26,839,454 - 26,841,916 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	2,685,774 - 2,689,402 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

benign familial infantile seizures 2 (ISO)

cerebrotendinous xanthomatosis (ISO)

chromosome 16p11.2 deletion syndrome, 593-kb (ISO)

chromosome 16p11.2 duplication syndrome (ISO)

coronin-1A deficiency (ISO)

Developmental Disabilities (ISO)

dilated cardiomyopathy (ISO)

epilepsy (ISO)

Episodic Kinesigenic Dyskinesia (ISO)

episodic kinesigenic dyskinesia 1 (ISO)

Familial Infantile Convulsions and Paroxysmal Choreoathetosis (ISO)

Febrile Seizures (ISO)

genetic disease (ISO)

Glycogen Storage Disease XII (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorders (ISO)

paroxysmal nonkinesigenic dyskinesia 1 (ISO)

schizophrenia (ISO)

spondylocostal dysostosis 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of short-term synaptic potentiation (IEA)

negative regulation of SNARE complex assembly (IEA)

neuromuscular process controlling posture (IEA,ISO)

regulation of calcium-dependent activation of synaptic vesicle fusion (IEA)

synaptic vesicle fusion to presynaptic active zone membrane (IEA)

Cellular Component

axon terminus (IEA)

glutamatergic synapse (IEA,ISO)

membrane (IEA)

neuron projection (ISO)

plasma membrane (IEA)

presynapse (IEA)

presynaptic membrane (IEA,ISO)

synaptic vesicle (IEA)

vesicle (IEA)

Molecular Function

protein binding (ISO)

SH3 domain binding (ISO)

syntaxin-1 binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PRRT2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	26,838,280 - 26,841,918 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	26,839,454 - 26,841,916 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	2,685,774 - 2,689,402 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

PRRT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	29,812,193 - 29,815,881 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	29,811,382 - 29,815,892 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	29,823,514 - 29,827,202 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	29,730,910 - 29,734,703 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	72,969,059 - 72,972,852 (-)	NCBI		Celera
Cytogenetic Map	16	p11.2	NCBI
HuRef	16	27,484,047 - 27,487,840 (+)	NCBI		HuRef
CHM1_1	16	31,039,218 - 31,043,011 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	30,094,359 - 30,098,044 (+)	NCBI		T2T-CHM13v2.0

Prrt2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	126,616,707 - 126,620,800 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	126,616,703 - 126,620,383 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	127,017,542 - 127,021,450 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	127,017,531 - 127,021,211 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	134,161,056 - 134,164,725 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	7	126,865,670 - 126,869,339 (-)	NCBI		Celera
Cytogenetic Map	7	F3	NCBI
cM Map	7	69.28	NCBI

Prrt2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	191,054,962 - 191,059,632 (-)	NCBI		GRCr8
mRatBN7.2	1	181,625,243 - 181,628,833 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	181,604,545 - 181,628,850 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	189,976,606 - 189,980,197 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	197,162,689 - 197,166,280 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	189,830,073 - 189,833,663 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	198,451,042 - 198,454,998 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	198,451,324 - 198,454,914 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	205,431,478 - 205,435,409 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	186,196,585 - 186,199,258 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	179,279,909 - 179,283,499 (-)	NCBI		Celera
Cytogenetic Map	1	q37	NCBI

Prrt2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955493	7,144,389 - 7,148,613 (-)	NCBI	ChiLan1.0	ChiLan1.0

PRRT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	30,561,777 - 30,565,468 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	35,660,408 - 35,664,122 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	16	30,182,381 - 30,186,015 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	30,183,352 - 30,187,862 (+)	Ensembl	panpan1.1		panPan2

PRRT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	17,872,670 - 17,877,502 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	17,873,521 - 17,903,184 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	19,449,454 - 19,454,305 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	18,006,274 - 18,011,127 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	18,006,312 - 18,010,071 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	17,805,776 - 17,810,626 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	17,721,471 - 17,726,322 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	18,036,767 - 18,041,616 (+)	NCBI		UU_Cfam_GSD_1.0

Prrt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	124,562,323 - 124,565,929 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	12,659,905 - 12,663,110 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	12,660,181 - 12,663,788 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRRT2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	18,048,618 - 18,052,480 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	18,048,614 - 18,052,481 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	18,534,378 - 18,543,204 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Prrt2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624782	13,390,347 - 13,393,775 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007989802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007989809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007989819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000004151 ⟹ ENSCSAP00000002411

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	5	26,839,454 - 26,841,916 (-)	Ensembl

RefSeq Acc Id:

XM_007989802 ⟹ XP_007987993

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	26,838,280 - 26,841,918 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	2,685,774 - 2,689,402 (+)	NCBI

Sequence:

show sequence

GGAGGGGACCGGAGAGGAGGGGATGAGCACACGGGAGGGGAGAGGAGGGAGACCCGCCGCCTCC
CTCCCTCCCTAGCTGACTTGCTCTCTCCCGGGCTGCGGCTGCTGCAAAAGCCAGCAGCGGCAGC
GGGAGCTGTCCGGAGGCCGGCGTCGAGGGTTTGCCGCTGTCTCTGCTATTCCATCCTTCCCAAA
GGGGCTCTCTCCCCTCTCCCATCTCAAGATGGCAGCCAGCAGCTCCGAGGTCTCTGAGATGAAG
GGGGTTGAGGAGAGTCCCGAGGTTCCAGGCAAAGGGCCTGGCCATTCTGAAGCTGAAACTGGCC
CTCCCCAGGTCCTAGCAGGGGTACCAGACCAGCCAGAGGCCCCGCAGCCAGGCCCAGACACCAC
TGCAGCCCTTGTGGACTCAGGGCCCAAGGCTGGGCTGGCTCCAGAAACCCCAGAGACCCCGGCT
GGGGCCTCAGAAACAGCCCAGGCCACAGACCTCAGCTTAAGCCCAGGAGGGGAATCAAAGGCCA
ACTGCAGCCCCGAACAGCCATGCCAAGAAACAGTGTCTAAACCAGAAGTGAGCAAAGAGGCCAC
TGCAGACCAGGGGTCCAGGCTGGAGTCTGCAGCCCCACCTGAACCAGCCCCAGAGCCTGCTCCG
CAGCCAGACCCCCAGCCAGATTCCCAGCCCACCCCCAAGCCAGCCATTCAACCAGCGCTGCCTA
CCCAGGAGGACCCCACCCCTGAGATTCTGTCTGAGAGTGTGGAGGAAAAGCAAGAGAATGGGGC
AGTGGTGCCCCTGCAGGCTGGTGATGGGGAAGAGGGCCCAGCCCCTGAGCCTCACTCGCCACCC
TCAAAAAAATCCCCCCCAGCTAATGGGGCTCCCCCCCGAGTGCTGCAGCAGTTGGTTGAGGAGG
ATCGAATGGGAAGGGCGCACAGTGGGCATCCAGGATCTCCCCGAGGTAGCCTGAGCCGCCACCC
CAGCTCCCAGCTGGCAGGTCCTGGGGTGGAGGGGGGTGAAGGCACCCAGAAACCTCGGGACTAC
ATCATCCTTGCCATCCTGTCCTGCTTCTGCCCCATGTGGCCTGTCAACATCGTGGCCTTCGCTT
ATGCTGTCATGTCCCGGAACAGCCTGCAGCAGGGGGACGTGGACGGGGCCCAGCGTCTGGGCCG
TGTGGCCAAGCTCTTAAGCATCGTGGCACTGGTGGGGGGAGTCCTCATCATCATCGCCTCCTGC
GTCATCAACTTAGGCGGTGAGTGGGGGCTTGGGACAGGCAGGGGAGGAATGGAAGGGTTGGCAA
GGGCAGCTTTACTAACCCCTGCCCCTGCTCTCTCCTGTCTGTCCTCCTTACCTCTCCTTTGTCT
CTCCTTGTCTCCCCCTCCCCCCTGTCTGTCCTTCCCTCTCCTCTCCCACAGTGTATAAGTGAGG
GGCTCTGCCCCACATCCCAAGACTTTTCTTCCTGTTGGGAGCTGCCTTGGGCCCATCCCTCCCC
TGGGGGGAGCCCAACTGATGGCCCTGGCCCCCACCCCTAAGGACCAAGGGAGCCTGAGCAGCCT
TGTTTACAGCTTCTGTCCTGCTCCTGCATCTTGCCAGGCTCCTCTGCCAACTGTAGGCCTCCTC
ATCCCTGCACTGGTTCCAACCTCCCTGCACTTCTGCCTGCATCCCCTCGAGCCTCTTGGCCCCC
TATCCCTGCACTTCTGGAAACCTCCCTGCACTCTGGAAACCTCCCTGAACACCTCCCCAACTCT
GCGCTCTCAGCCTCCCTGCATCTCTCCTGGCCTCCCTGCACTTCTTCCTGCCTCCCAAATTCTC
TGGACCTCCACCCTGGCCTCCTCCCAACTTCCATTGTCTTGGCATCTCTCAACCCTCAGTCCTC
TCTTCCTTCCCTTATCATCTCCCCCTTCCTCTTCCTGCCTCCTCATCTCCCTTAAGCATCCTCT
TCTCCAACCTCCCGTCACCGTTTACTCTGCAAAAATGACAGCACTTAGTTGAGGCTTGGGGGCG
GGAAGCAGTGTTGGGAGAGGGCTCCCCAACCCCGGGCTCCGACTGTTCTCTGCTGGGACCACCC
AGGGTCGGACACCCAAGGGTGTCTTGCAGGTCGTAGAGCTGGCAAGCCGGGCCTCGTGTGGGGA
CTCGGGTGAGGGTGGCGAGCACTGGTTCCGAACGCACGCAGGGGAGAAGGGAGGGACGCGGCGA
CCCCTCCAGGTCAGCTGGAGTTGACCCGCCCACCTGGGCTTTTCAACCCCAGTCCACGAGTTTT
TTCTTGAAGGTGTCGGGCTAGATTCATTCACGTGCTTCGTAACGAAAGAATCCAAAAAATAGGA
CCAAAGCGCCCACTGGCAGGAGCGAGGGCGGGGCGGGGCGCTCTATAATTATTTTCTAAGCTGA
CGGGGGAGGTTTGTTGCACGCGACAGCCCGCTGAGGAGGCGGGGACCGAGCTACAACGCGGTTC
GGATTTGGCGGGGTTTTTTTTCCAAAAAAAAAAAAAAAACAAATTCTTAAAAAAAAAAAAGAAA
AAGGCTATTATCAAACTGATTTCTCCCTTTTTGTATGCCGGATGCTGCATGAGTCTGAAACACC
AATAAACGGAGACTGCATGA

hide sequence

RefSeq Acc Id:

XM_007989809 ⟹ XP_007988000

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	26,838,280 - 26,841,757 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	2,685,855 - 2,689,402 (+)	NCBI

Sequence:

show sequence

CCCGGGCAGACTGAGGCTGCGGGGTTTGCCGCTGTCTCTGCTATTCCATCCTTCCCAAAGGGGC
TCTCTCCCCTCTCCCATCTCAAGATGGCAGCCAGCAGCTCCGAGGTCTCTGAGATGAAGGGGGT
TGAGGAGAGTCCCGAGGTTCCAGGCAAAGGGCCTGGCCATTCTGAAGCTGAAACTGGCCCTCCC
CAGGTCCTAGCAGGGGTACCAGACCAGCCAGAGGCCCCGCAGCCAGGCCCAGACACCACTGCAG
CCCTTGTGGACTCAGGGCCCAAGGCTGGGCTGGCTCCAGAAACCCCAGAGACCCCGGCTGGGGC
CTCAGAAACAGCCCAGGCCACAGACCTCAGCTTAAGCCCAGGAGGGGAATCAAAGGCCAACTGC
AGCCCCGAACAGCCATGCCAAGAAACAGTGTCTAAACCAGAAGTGAGCAAAGAGGCCACTGCAG
ACCAGGGGTCCAGGCTGGAGTCTGCAGCCCCACCTGAACCAGCCCCAGAGCCTGCTCCGCAGCC
AGACCCCCAGCCAGATTCCCAGCCCACCCCCAAGCCAGCCATTCAACCAGCGCTGCCTACCCAG
GAGGACCCCACCCCTGAGATTCTGTCTGAGAGTGTGGAGGAAAAGCAAGAGAATGGGGCAGTGG
TGCCCCTGCAGGCTGGTGATGGGGAAGAGGGCCCAGCCCCTGAGCCTCACTCGCCACCCTCAAA
AAAATCCCCCCCAGCTAATGGGGCTCCCCCCCGAGTGCTGCAGCAGTTGGTTGAGGAGGATCGA
ATGGGAAGGGCGCACAGTGGGCATCCAGGATCTCCCCGAGGTAGCCTGAGCCGCCACCCCAGCT
CCCAGCTGGCAGGTCCTGGGGTGGAGGGGGGTGAAGGCACCCAGAAACCTCGGGACTACATCAT
CCTTGCCATCCTGTCCTGCTTCTGCCCCATGTGGCCTGTCAACATCGTGGCCTTCGCTTATGCT
GTCATGTCCCGGAACAGCCTGCAGCAGGGGGACGTGGACGGGGCCCAGCGTCTGGGCCGTGTGG
CCAAGCTCTTAAGCATCGTGGCACTGGTGGGGGGAGTCCTCATCATCATCGCCTCCTGCGTCAT
CAACTTAGGCGGTGAGTGGGGGCTTGGGACAGGCAGGGGAGGAATGGAAGGGTTGGCAAGGGCA
GCTTTACTAACCCCTGCCCCTGCTCTCTCCTGTCTGTCCTCCTTACCTCTCCTTTGTCTCTCCT
TGTCTCCCCCTCCCCCCTGTCTGTCCTTCCCTCTCCTCTCCCACAGTGTATAAGTGAGGGGCTC
TGCCCCACATCCCAAGACTTTTCTTCCTGTTGGGAGCTGCCTTGGGCCCATCCCTCCCCTGGGG
GGAGCCCAACTGATGGCCCTGGCCCCCACCCCTAAGGACCAAGGGAGCCTGAGCAGCCTTGTTT
ACAGCTTCTGTCCTGCTCCTGCATCTTGCCAGGCTCCTCTGCCAACTGTAGGCCTCCTCATCCC
TGCACTGGTTCCAACCTCCCTGCACTTCTGCCTGCATCCCCTCGAGCCTCTTGGCCCCCTATCC
CTGCACTTCTGGAAACCTCCCTGCACTCTGGAAACCTCCCTGAACACCTCCCCAACTCTGCGCT
CTCAGCCTCCCTGCATCTCTCCTGGCCTCCCTGCACTTCTTCCTGCCTCCCAAATTCTCTGGAC
CTCCACCCTGGCCTCCTCCCAACTTCCATTGTCTTGGCATCTCTCAACCCTCAGTCCTCTCTTC
CTTCCCTTATCATCTCCCCCTTCCTCTTCCTGCCTCCTCATCTCCCTTAAGCATCCTCTTCTCC
AACCTCCCGTCACCGTTTACTCTGCAAAAATGACAGCACTTAGTTGAGGCTTGGGGGCGGGAAG
CAGTGTTGGGAGAGGGCTCCCCAACCCCGGGCTCCGACTGTTCTCTGCTGGGACCACCCAGGGT
CGGACACCCAAGGGTGTCTTGCAGGTCGTAGAGCTGGCAAGCCGGGCCTCGTGTGGGGACTCGG
GTGAGGGTGGCGAGCACTGGTTCCGAACGCACGCAGGGGAGAAGGGAGGGACGCGGCGACCCCT
CCAGGTCAGCTGGAGTTGACCCGCCCACCTGGGCTTTTCAACCCCAGTCCACGAGTTTTTTCTT
GAAGGTGTCGGGCTAGATTCATTCACGTGCTTCGTAACGAAAGAATCCAAAAAATAGGACCAAA
GCGCCCACTGGCAGGAGCGAGGGCGGGGCGGGGCGCTCTATAATTATTTTCTAAGCTGACGGGG
GAGGTTTGTTGCACGCGACAGCCCGCTGAGGAGGCGGGGACCGAGCTACAACGCGGTTCGGATT
TGGCGGGGTTTTTTTTCCAAAAAAAAAAAAAAAACAAATTCTTAAAAAAAAAAAAGAAAAAGGC
TATTATCAAACTGATTTCTCCCTTTTTGTATGCCGGATGCTGCATGAGTCTGAAACACCAATAA
ACGGAGACTGCATGA

hide sequence

RefSeq Acc Id:

XM_007989819 ⟹ XP_007988010

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	26,838,280 - 26,841,916 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	2,685,774 - 2,689,402 (+)	NCBI

Sequence:

show sequence

AGGGGACCGGAGAGGAGGGGATGAGCACACGGGAGGGGAGAGGAGGGAGACCCGCCGCCTCCCT
CCCTCCCTAGCTGACTTGCTCTCTCCCGGGCTGCGGCTGCTGCAAAAGCCAGCAGCGGCAGCGG
GAGCTGTCCGGAGGCCGGCGTCGAGGGTTTGCCGCTGTCTCTGCTATTCCATCCTTCCCAAAGG
GGCTCTCTCCCCTCTCCCATCTCAAGATGGCAGCCAGCAGCTCCGAGGTCTCTGAGATGAAGGG
GGTTGAGGAGAGTCCCGAGGTTCCAGGCAAAGGGCCTGGCCATTCTGAAGCTGAAACTGGCCCT
CCCCAGGTCCTAGCAGGGGTACCAGACCAGCCAGAGGCCCCGCAGCCAGGCCCAGACACCACTG
CAGCCCTTGTGGACTCAGGGCCCAAGGCTGGGCTGGCTCCAGAAACCCCAGAGACCCCGGCTGG
GGCCTCAGAAACAGCCCAGGCCACAGACCTCAGCTTAAGCCCAGGAGGGGAATCAAAGGCCAAC
TGCAGCCCCGAACAGCCATGCCAAGAAACAGTGTCTAAACCAGAAGTGAGCAAAGAGGCCACTG
CAGACCAGGGGTCCAGGCTGGAGTCTGCAGCCCCACCTGAACCAGCCCCAGAGCCTGCTCCGCA
GCCAGACCCCCAGCCAGATTCCCAGCCCACCCCCAAGCCAGCCATTCAACCAGCGCTGCCTACC
CAGGAGGACCCCACCCCTGAGATTCTGTCTGAGAGTGTGGAGGAAAAGCAAGAGAATGGGGCAG
TGGTGCCCCTGCAGGCTGGTGATGGGGAAGAGGGCCCAGCCCCTGAGCCTCACTCGCCACCCTC
AAAAAAATCCCCCCCAGCTAATGGGGCTCCCCCCCGAGTGCTGCAGCAGTTGGTTGAGGAGGAT
CGAATGGGAAGGGCGCACAGTGGGCATCCAGGATCTCCCCGAGGTAGCCTGAGCCGCCACCCCA
GCTCCCAGCTGGCAGGTCCTGGGGTGGAGGGGGGTGAAGGCACCCAGAAACCTCGGGACTACAT
CATCCTTGCCATCCTGTCCTGCTTCTGCCCCATGTGGCCTGTCAACATCGTGGCCTTCGCTTAT
GCTGTCATGTCCCGGAACAGCCTGCAGCAGGGGGACGTGGACGGGGCCCAGCGTCTGGGCCGTG
TGGCCAAGCTCTTAAGCATCGTGGCACTGGTGGGGGGAGTCCTCATCATCATCGCCTCCTGCGT
CATCAACTTAGGCGTGTATAAGTGAGGGGCTCTGCCCCACATCCCAAGACTTTTCTTCCTGTTG
GGAGCTGCCTTGGGCCCATCCCTCCCCTGGGGGGAGCCCAACTGATGGCCCTGGCCCCCACCCC
TAAGGACCAAGGGAGCCTGAGCAGCCTTGTTTACAGCTTCTGTCCTGCTCCTGCATCTTGCCAG
GCTCCTCTGCCAACTGTAGGCCTCCTCATCCCTGCACTGGTTCCAACCTCCCTGCACTTCTGCC
TGCATCCCCTCGAGCCTCTTGGCCCCCTATCCCTGCACTTCTGGAAACCTCCCTGCACTCTGGA
AACCTCCCTGAACACCTCCCCAACTCTGCGCTCTCAGCCTCCCTGCATCTCTCCTGGCCTCCCT
GCACTTCTTCCTGCCTCCCAAATTCTCTGGACCTCCACCCTGGCCTCCTCCCAACTTCCATTGT
CTTGGCATCTCTCAACCCTCAGTCCTCTCTTCCTTCCCTTATCATCTCCCCCTTCCTCTTCCTG
CCTCCTCATCTCCCTTAAGCATCCTCTTCTCCAACCTCCCGTCACCGTTTACTCTGCAAAAATG
ACAGCACTTAGTTGAGGCTTGGGGGCGGGAAGCAGTGTTGGGAGAGGGCTCCCCAACCCCGGGC
TCCGACTGTTCTCTGCTGGGACCACCCAGGGTCGGACACCCAAGGGTGTCTTGCAGGTCGTAGA
GCTGGCAAGCCGGGCCTCGTGTGGGGACTCGGGTGAGGGTGGCGAGCACTGGTTCCGAACGCAC
GCAGGGGAGAAGGGAGGGACGCGGCGACCCCTCCAGGTCAGCTGGAGTTGACCCGCCCACCTGG
GCTTTTCAACCCCAGTCCACGAGTTTTTTCTTGAAGGTGTCGGGCTAGATTCATTCACGTGCTT
CGTAACGAAAGAATCCAAAAAATAGGACCAAAGCGCCCACTGGCAGGAGCGAGGGCGGGGCGGG
GCGCTCTATAATTATTTTCTAAGCTGACGGGGGAGGTTTGTTGCACGCGACAGCCCGCTGAGGA
GGCGGGGACCGAGCTACAACGCGGTTCGGATTTGGCGGGGTTTTTTTTCCAAAAAAAAAAAAAA
AACAAATTCTTAAAAAAAAAAAAGAAAAAGGCTATTATCAAACTGATTTCTCCCTTTTTGTATG
CCGGATGCTGCATGAGTCTGAAACACCAATAAACGGAGACTGCATGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007987993	(Get FASTA)	NCBI Sequence Viewer
	XP_007988000	(Get FASTA)	NCBI Sequence Viewer
	XP_007988010	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000002411
	ENSCSAP00000002411.1

RefSeq Acc Id:	XP_007987993 ⟸ XM_007989802
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007988010 ⟸ XM_007989819
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9R1C2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007988000 ⟸ XM_007989809
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSCSAP00000002411 ⟸ ENSCSAT00000004151

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000006112	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000004151.1	UniProtKB/TrEMBL
InterPro	CD225/Dispanin	UniProtKB/TrEMBL
	CD225/Dispanin_fam	UniProtKB/TrEMBL
NCBI Gene	PRRT2	ENTREZGENE
PANTHER	NG5	UniProtKB/TrEMBL
	PROLINE-RICH TRANSMEMBRANE PROTEIN 2	UniProtKB/TrEMBL
Pfam	CD225	UniProtKB/TrEMBL
UniProt	A0A0D9R1C2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM