DNAJA3 (DnaJ heat shock protein family (Hsp40) member A3) - Rat Genome Database

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Gene: DNAJA3 (DnaJ heat shock protein family (Hsp40) member A3) Chlorocebus sabaeus
Analyze
Symbol: DNAJA3
Name: DnaJ heat shock protein family (Hsp40) member A3
RGD ID: 18675102
Description: ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); GTPase regulator activity (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); cellular senescence (ortholog); ASSOCIATED WITH epilepsy (ortholog); idiopathic generalized epilepsy (ortholog); Kohlschutter-Tonz syndrome (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dnaJ homolog subfamily A member 3, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.154,109,612 - 4,139,789 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606826,530,263 - 26,581,063 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DNAJA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.154,109,612 - 4,139,789 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606826,530,263 - 26,581,063 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
DNAJA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38164,425,868 - 4,456,775 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl164,425,805 - 4,456,775 (+)EnsemblGRCh38hg38GRCh38
GRCh37164,475,869 - 4,506,776 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36164,415,883 - 4,446,777 (+)NCBINCBI36Build 36hg18NCBI36
Build 34164,415,882 - 4,446,774NCBI
Celera164,684,763 - 4,715,682 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef164,443,030 - 4,474,077 (+)NCBIHuRef
CHM1_1164,475,548 - 4,506,722 (+)NCBICHM1_1
T2T-CHM13v2.0164,455,068 - 4,485,978 (+)NCBIT2T-CHM13v2.0
Dnaja3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39164,501,934 - 4,525,559 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl164,457,853 - 4,525,559 (+)EnsemblGRCm39 Ensembl
GRCm38164,684,070 - 4,707,695 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,639,989 - 4,707,695 (+)EnsemblGRCm38mm10GRCm38
MGSCv37164,684,070 - 4,707,695 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36164,599,351 - 4,622,919 (+)NCBIMGSCv36mm8
Celera165,314,744 - 5,338,370 (+)NCBICelera
Cytogenetic Map16A1NCBI
cM Map162.46NCBI
Dnaja3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81011,361,168 - 11,386,599 (-)NCBIGRCr8
mRatBN7.21010,854,732 - 10,880,171 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1010,854,732 - 10,880,161 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1015,563,581 - 15,588,960 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01015,052,404 - 15,077,778 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01010,721,534 - 10,746,679 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01011,059,701 - 11,085,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1011,060,313 - 11,085,210 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0109,825,059 - 9,850,531 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41010,984,721 - 11,009,374 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11010,985,703 - 11,009,402 (-)NCBI
Celera109,817,864 - 9,842,384 (-)NCBICelera
Cytogenetic Map10q12NCBI
Dnaja3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544212,967,438 - 13,010,943 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544212,971,031 - 13,002,605 (-)NCBIChiLan1.0ChiLan1.0
DNAJA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2184,956,514 - 4,986,628 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1168,746,188 - 8,776,316 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0163,351,825 - 3,381,914 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1164,519,965 - 4,550,786 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl164,519,965 - 4,550,786 (+)Ensemblpanpan1.1panPan2
DNAJA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1636,921,941 - 36,967,718 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl636,917,858 - 36,967,689 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,249,594 - 38,296,021 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0637,125,733 - 37,171,931 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl637,123,075 - 37,171,919 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1636,919,804 - 36,966,222 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0636,812,985 - 36,859,394 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0637,214,235 - 37,260,679 (-)NCBIUU_Cfam_GSD_1.0
Dnaja3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344106,634,555 - 106,665,565 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493669444,635 - 74,958 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493669443,898 - 74,939 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl337,883,244 - 37,919,324 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1337,883,233 - 37,919,141 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2338,938,175 - 38,974,053 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Dnaja3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248242,214,240 - 2,259,696 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248242,215,337 - 2,259,696 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_037989896   ⟹   XP_037845824
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606826,548,255 - 26,581,063 (-)NCBI
RefSeq Acc Id: XM_037989897   ⟹   XP_037845825
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606826,530,345 - 26,581,063 (-)NCBI
RefSeq Acc Id: XM_037989898   ⟹   XP_037845826
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606826,530,263 - 26,581,063 (-)NCBI
RefSeq Acc Id: XM_037989899   ⟹   XP_037845827
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606826,548,255 - 26,581,063 (-)NCBI
RefSeq Acc Id: XM_037989900   ⟹   XP_037845828
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606826,548,255 - 26,580,881 (-)NCBI
RefSeq Acc Id: XP_037845826   ⟸   XM_037989898
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037845825   ⟸   XM_037989897
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037845827   ⟸   XM_037989899
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037845824   ⟸   XM_037989896
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037845828   ⟸   XM_037989900
- Peptide Label: isoform X5


Additional Information

Database Acc Id Source(s)
NCBI Gene DNAJA3 ENTREZGENE