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Gene: IPCEF1 (interaction protein for cytohesin exchange factors 1) Chlorocebus sabaeus

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Symbol:

IPCEF1

Name:

interaction protein for cytohesin exchange factors 1

RGD ID:

18635640

Description:

ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); chromosome 6q24-q25 deletion syndrome (ortholog); lymphoid leukemia (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

interactor protein for cytohesin exchange factors 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	81,686,467 - 81,891,325 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	81,691,775 - 81,882,740 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	54,064,386 - 54,293,218 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

allergic contact dermatitis (ISO)

chromosome 6q24-q25 deletion syndrome (ISO)

lymphoid leukemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

protein domain specific binding (ISO)

References

Genomics

Comparative Map Data

IPCEF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	81,686,467 - 81,891,325 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	81,691,775 - 81,882,740 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	54,064,386 - 54,293,218 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

IPCEF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	154,154,496 - 154,356,803 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	154,154,496 - 154,356,803 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	154,475,631 - 154,677,937 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	154,517,438 - 154,719,592 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	6	155,210,000 - 155,412,269 (-)	NCBI		Celera
Cytogenetic Map	6	q25.2	NCBI
HuRef	6	152,038,861 - 152,240,888 (-)	NCBI		HuRef
CHM1_1	6	154,739,273 - 154,941,543 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	155,356,475 - 155,558,805 (-)	NCBI		T2T-CHM13v2.0

Ipcef1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	6,835,779 - 6,973,185 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	6,835,796 - 7,002,478 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	6,885,779 - 7,054,782 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	6,885,796 - 7,052,478 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	3,323,356 - 3,460,176 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	3,305,631 - 3,434,998 (+)	NCBI		MGSCv36	mm8
Celera	10	6,841,539 - 6,985,563 (-)	NCBI		Celera
Cytogenetic Map	10	A1	NCBI
cM Map	10	1.85	NCBI

Ipcef1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	45,654,252 - 45,857,045 (-)	NCBI		GRCr8
mRatBN7.2	1	43,237,903 - 43,451,735 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	43,269,202 - 43,427,969 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	43,814,288 - 43,887,789 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	49,801,526 - 49,875,023 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	43,889,783 - 43,963,274 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	43,563,457 - 43,743,424 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	43,567,842 - 43,638,161 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	44,895,465 - 44,982,610 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	37,635,767 - 37,711,074 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	37,638,711 - 37,714,025 (-)	NCBI
Celera	1	38,917,683 - 38,990,772 (-)	NCBI		Celera
Cytogenetic Map	1	q11	NCBI

Ipcef1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955439	7,756,126 - 7,836,542 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955439	7,666,246 - 7,836,481 (+)	NCBI	ChiLan1.0	ChiLan1.0

IPCEF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	174,178,764 - 174,380,295 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	172,070,393 - 172,271,889 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	151,975,688 - 152,173,692 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

IPCEF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	44,066,398 - 44,164,173 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	44,070,004 - 44,363,107 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	44,903,482 - 45,072,137 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	44,250,266 - 44,418,577 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	44,253,530 - 44,552,166 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	44,116,738 - 44,285,293 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	43,989,810 - 44,165,495 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	44,545,164 - 44,721,333 (-)	NCBI		UU_Cfam_GSD_1.0

Ipcef1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	139,344,627 - 139,495,991 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	6,595,888 - 6,662,458 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	6,595,905 - 6,662,509 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IPCEF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	12,506,220 - 12,602,724 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	12,511,612 - 12,602,736 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	14,572,756 - 14,718,904 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Ipcef1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624785	4,017,720 - 4,111,043 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624785	4,031,811 - 4,114,650 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in IPCEF1
6143 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008007648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000011548 ⟹ ENSCSAP00000009615

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	13	81,691,775 - 81,882,740 (-)	Ensembl

RefSeq Acc Id:

XM_008007648 ⟹ XP_008005839

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	81,686,467 - 81,891,325 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	54,064,386 - 54,293,218 (-)	NCBI

Sequence:

show sequence

GCTTTGAATGTTAGTTCTGGGTTGACTGAGCCTCCAGAGCTAAGGCTGCTTTGAGTAGAATCCT
CAAGCTTGGCGTCAGAGTACTATGAGGCTTCAGAATCCAGAAATAAAGAGACTACTCTTGGATT
TACTCTCTTTGTATTGCATGTCAAAGACAACAGAACTGGACCAAGAAAGTTCATAACTTTTTGC
TTTTGTTTCTACTAAGATGACATCATACCTGGCTATTGATGGCAGTGCTCTTCAGGTTCCCTTG
CGTCAGAAGCCGAGGAGGAAAACTCAAGGTTTTCTCACGATGAGTCGGAGGAGGATATCGTGTA
AAGATCTGGGCCATGCTGACTGCCAAGGGTGGCTGTATAAGAAAAAGGAAAAGGGAAGTTTCCT
AAGCAACAAATGGAAAAAGTTCTGGGTGATACTGAAGGGGTCGTCACTGTACTGGTATAGCAAT
CAAATGGCAGAGAAAGCTGATGGATTTGTCAACCTGCCTGATTTCACTGTGGAAAGAGCATCCG
AATGCAAGAAAAAGCATGCTTTTAAGATCAGCCATCCACAGATCAAGACCTTTTATTTTGCAGC
TGAGAATGTGCAGGAAATGAATGTGTGGTTAAATAAACTTGGATTGGCTGTAATCCATCAGGAA
TCCACTACAAAGGATGAAGAATGTTACAGTGAAAGTGAACAGGAAGATCCTGAAATAGCTGCAG
AGACACCACCCCCTCACGCTTCCCAGACTCAGTCTTCGGCTGCACAGCAGGCATCTTCATCCTC
ACCCAGCCTGAGTGGAACATTGTGTTCTTTCTCTTCCCTGGAAAATACAATGAAGACACCCAGC
AGTTTTCCTTCCTCCTTATCTAAAGAGAGACAGTCCTTGCCCGACACAGTTAACAGTTTGTCTG
CTGCTGAAGATGAGGGACAACCAATAACGTTTGCTGTACAAGTTCATTCACCTGCACCCTCAGA
GGCAGGCAGCCACAAGGCCCCAGAAAACAGCTTTGTCACATCAGAAAGTGGATTTTTGAACTCT
TTATCTAGTGATGATACTTCTTCATTGAGTAGCAATCATGACCATCTTACTGTCCCGGATAAGC
CTGCTGGATCAAAGATCATGGACAAAGAAGAGATAAAAGTGTCCGAAGATGACGAAATGGAGAA
GCTGTACAAATCGTTAGAGCAAGCTAGTCTATCTCCTCTTGGGGACCGGCGGCCTTCGACTAAA
AAGGAGCTGAGAAAATCCTTTGTTAAGCGGTGTAAAAATCCATCTATAAACGAGAAACTCCACA
AAATCCGAACATTGAATAGCACATTAAAGTGTAAAGAACATGATCTGGCCATGATTAACCAGTT
GCTGGATGACCCGAAGCTGACAGCCAGGAAATACAGAGAGTGGAAAGTCACGAACACCCTGCTG
ATCCAGGACATCTATCAGCAGCAGCGGGCTTCGCCTTCCCCTGATGACACTGATGACACCCCCC
AGGAACTCAAGAAATCACCTTCTTCTCCCTGTGTTGAAAATTCCATTTGAGACACAAAGTCAGG
GTTTTTTCCTCTTCTATTTTATCACGAGCAACTCTTCAAGATATTGTAAAAGCTTACATTTTTC
CTTAAAAGGAAAACTGAATCCCAGTCCTTCAAGCATCAGCTTCCCATCTAAAGATGCACCTTAC
ATGAAGATAATCACCAAATACAGCAGGGCTCCTCATTCCATTTGTAACGCATCCATTGAGACTG
GAATGATTGAGTTCAGTTGAAAGGCGTTTTTTGTGTTCCTACTGGGAGCTCACGGTGATGTAGA
GCTCTAGGAGGGATGTGAGAAATGTCTCTTCTGTTCCTTGCTCTCCAGAGAATGCTATGGACAA
ACATCAAATTTTACCAGGAATAATTGTCCATGGAAACATTCTGTTTTTCAAAAGAAGAATGTAC
ATATGCCACTTGGCTGGGAAGCTGTGTGGCCCAAATCACTTTTTGAGTGGAGGAATGTTTTCTA
TAGCAGTGACTGCAAGGACAAACGTGGTGTTGCAGAGCAAAAATTCCTTGCCTTTGGTATAGAA
TGGTGGTGCCTTTTCCACGTGTTGAGAAATACTTAATAGACAATGGCGTGTGGGAGAGCTGAAG
GGGGAGGCGTGTTCCATATTCCACTCACTCAAAGGACAGCTTAGTGTTTCCACACTTTGTGCAG
GTTAGGGGATCTGATTAATATTTCCTTTCCTTACAACAGCTAGAGAAAACATCTCATCACAATT
GGCGACCTCTACTCTCTTCGAACTTTCCTACTCAACGGTAGGAGATAGTAATATGTCCAGCAAA
AAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTATACATAGTGTGAATTTATATCCAGATT
TCCCAGGATCAGTATTGACAAGATGACTTTGGCATCTGAATTGTTTTAATATCTTTACTCAAAA
AAAAAAAAAACCACACACAAAAAACAAAAACCAAAAACAAAACAACAACCCACGGAAACAACAA
AAGAGTTAAACATGATGGTTTTATTTTTGTATGTTTATATGTCACTTGTGTGCTATGTGAATAG
CTATCTATGTTTGTTATTTAAATATATTTATAGAAGTTCAAATTACTAGTGTTTTAAAAGATGA
TATACTATTATATATTGTGCTTAGTATATATTTGATGAGTCTAGACGTTTTTGCTTGAGAAAAA
TAGAAATACTATTGATTCACTGGTGTTACGATGTTGCACTATAATGTCTGAGGAATGCTCAGGA
AATCTTGTGGGAAAAAAATGGGGCATGCATTCATAATTTTTCTTTTTCTTTCCCACCCCAAACC
CCATGAGCTCTTACATTTAGATTTCTATCTCTTGTCAGTCACTCTTTTAACCAGAAAAGGATTT
TCATCTTAGATTATCCTTTCTATTAAATAAACTTTAAGCTTTGCGCCATTTATGCCTGCAAACC
TTAGATCAAAGGCAACACAACTAATGTCATCTTTTCATTAAAGACTAATAGAAATTTGGAAATC
ATTGTGGTAAAGAGAACTCATAGAGAAACAATATGAAAGTCTTCCCTTACTAATCACCATGAAT
ATTTCTCATCATAGGAATAACCACAACCCACCGAGTACCCATGTTGGCCCTGCCTACCCTTAAC
AAATTGTTGACATAACCTATTTTGTTTTATAGCTTCAAAGTGTAGCTTGACATTCAAACAGAAG
AAACCACTCGAATTATATCTGCAAACAAAATGGAAATAGTTGTTATTTCCCCAAGCTTTACTAA
GAAGCCTTCATACTCTGTAAACAAACAAACAAACAAAGAAACAAAAAACAACCTTAGCATTACG
AAATAAAAATAAAAAACAAGAAGCTACTAGAAGCTTCTCTAAGATAAGAGGCCAGGCCAATCAG
TTTGGCCAGCAAACATGTGGGTACTTCTCCACCTAGGGAAGCTAGTGAAGATGAGTTTGACCTG
TGGTGACCTGACGGAGGGAACATTCGGATCCTCAGATTGCACCCTGATGCCCTGGTCTGGGAGA
GCAGTGCTGTAACCTTTTGGCCCTGAAAACTACTGATTCTTTCTGTGATTAGCAGATACTAGAA
GGGAAATTATTTAGGATTGGCAATGTAAAGAGTATTGAAGGAACGGCAAATAACAATAGCAGAA
ATAACAGTGTGACACAAAGTACCCTTCCATCTATTTTTCTGTGGTTTGCAACACCAACCTGTAG
ACTTCCAGTTTTTCTTAAATTGAAGAGCTCCAGACACTTTTGAGCAGGGTTTGTGAACACCTTC
GAATGCTTTCCTTTGGCTTCTCTTGAAGACCTATTTCCCCCGCCTTTCAATGTAAACTCCTTTA
GTACCATTCAAACTTAAAGGCAAAAAAGATCCCTGGGATTACTTAGCCAAGGCTTAAAGTTATT
TTTCAAAGATACGTCAAGAACGTTAGCCTAGAAGTTTTCGCTTTGCTAGTTAAAGCTGACTGCA
GAGCGTCCCAAAGTGAAAGCAAAACTGAACTTCACAATTTTGCACCTGGCTTTCTGGAGCCCCA
TTGCCTGCTCATTCGTGTTTTTCCCCCTGTAAATTCTTTTGCTTTTGAACAGGTTGTGCTACAA
AGTAGGACTGCTTCTGTGAGTTCTCAGCCTAGGATGTGGACACTAAGACGTGGGTGGGGAGATA
GACAGGAGTGAGAGGGAGAGTAGGGGACACTTTCCATGACACTCAATGTAGGAAGACTTGGGCT
TCTCTCTCGGCCTCATGCCACTCTTCTGGTCCAAAGAATATTGGGAAAACTGGATTACTTTCAG
CATATTTCTTGAGACTAGGTCATCTCTGAAATGCATGGCGTAGTTTCATAGAGTCCAAGGGCCA
ACTCCTATACCCAGTTCTACAGTCTGTGAGCTGTGGAATGAGAGAGAAAACTGTGGCTGTTCAG
GAAGGAAGTGGAGAACCTCTCAGCACACGTAGATCCAAATCTGTGGCACCTGCCAAAGATTAGG
ATTTGGAGAGGACTCCTCTTTGGGGTTGTGAAGAGGACCTTTTCCCTCTATTGTTAGCGTGTAG
ATCCAGAACGGAGCCTGATGGGATGCCCTCACTGGTTAATATATTGCAAATAGACATGCTAGGC
CCTGCTTTGGAAGGGCCTCTGTTGCTTTAAAGAATTCTTAGCTTTGCCCCAAGAGCTGAAATCT
CAGAATAGGATCAAAGGCCTAGAAAGACTCCTAAAGTATAGGATTACAAAGACTCCAGGTAGCC
TAAGAAAGAGATTGTGTCTGGAGTCAGATTTCAATGTGAAACCCATGCCTTATATTTACACAGC
ACTTTGTAGTTTGCAAATGGGTGTGTTTTCAGCCCCCTCCCGCTGCCCCACGCTCTACGTGAGA
TAATTGTGGATTATTACAGTGAAGTGCCTGGCCCAGAGCCCCAAGTGGTAAAGCGGGAACTTGA
GTCTCAGGACTCCCAGCGGCTCTGTGCCCCTTCCCTTCTCTCCGCCCCCCACCTTGCTTCACCT
GTTACCTTGTTAAGTTGCTGTTGGCACACAGCCCACTAGGAGACCAAGAAGTTTGACTTGGAGT
GTGTGTTTCACTGCACTGGGTTCAGCATAGGGCCGGCCCTGGTGGCTGTTAGGCTACATTCTCC
GTTTGAAACCTAAGGGGCCCTCTGTGCTTGAGCACAGTCTCCTCCTAATGGCCCTGCCTCAACC
TGCTGGCGGGCTGTCTGTGGATTGAGTTTTCACCTAATCATGCTGTGTTTCCTTTCCTTTCTTT
CTGTACGTGAGACTACTTGGGAAGTGCTGTGAGATCCTTGGATGAAAAACATGTATTTAAAGAA
ATGGAGAGTGTTTATTTTGTTTGCTTTTTGAGGCATGTGCTGTCAGATGTCAGAGACCCAAGTT
AGTGATTAGAGGTTGGTCCTTTGACCTTCTTCTCTTAATTGCTTTTCATGTAATCATGATAATT
TACTCAGGTAGCACTCCAGTCACAAACAATGTCACAGAAACAGATTCAAAGAAAAAATGTTTTT
AAGTCTTGAAAAGAAGTGCTATTCAAATTTACGCCATGTTTAAATTTGTAGGTACATTATCTCT
TAGTAAGAAAGACTTTTGTTTTTAGACGGAGTCTCACTCTATTGCCCAGGCTGGAGTGCAGTGG
CGCAATCTCAGCTTACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCTTGCCTCAGCCTCC
CGAGTAGCTGGGACTACGCCCAGCTAATTTTTATATTTTTAGTAGAGACCGGGGTTTACCATGT
TGCCCTGGCTGGTTTCAAACTCCTGACTTCAGGTGATCCGCCTGCCTCTGCCTCCCAAAGTGCT
AAGATTACAGGCGTGAGCCACCACCCTCGGCTGAAAGACAGTATTTTGATAGAACCACATACAT
GATTTAATGAGTAATGTTAAGTACAGAAAAGCTGCCGTATCCACATAAAGTTTTAGGGGCATTT
GTTCTTCAGTCTAACAAGAATATGATACCCGATTGTGGATTTCCAATTTATTTCTCTTCCAGTT
TTTTTTTTTGTATACCTCACAGGAGAAACTGAGTCCTAGAACTGGGAGATGACTGCCCTGCCCA
GGGTTTTGTAATACATAGTTGAAAATAAAAGCCCCTGAAACTAAATGTTTGCAGCCTGTATAAA
ATGGCCTGTGGAAGGGGGGTAATTTCTCTCCTCACTGAAAGCCACTCGTCTCCTTGAATGAGAC
ACTGAGCAGACATACGTTTCTCTGTGTCGTGGAGCCAGGAAACATTCCCTTGCCTCTTCAGCAC
ATCTCAGTTCTTCCCCACATGACCCCAGAACCACTTAGAAAACACTGAAATGGATTCTTCATTG
AAAGAAGCTTTATATTTCTCTTGCTGTAAGGATACTTAACTGCTCTGTATTTGATTTTCTTTCT
TTTTTTTTTTTTTTTTACCTTTAGCCCAAAAAGGAAGTGTGCCCCATGGAAACAGCAAATGCCG
TAAAATAAAAACCAGGAGTTTTAATCGCCATATATTTTAATGTGCTTGCATGATGGGAATGTGA
TGTTTAGCACTGCATGGTGTTTGGGGGCAAGATATTAACGTGGAAATCTTAGCTTAAGTTTTTC
TGTGCTCTCATGCTGTGTCAGCTACCCCTCTAAACTGAAAAAAGAGGCATGGCTCATTTCTCTC
CTGCTTTATGTTTTTGAGGTTGACTTGTAAGATAAAAATAAAAATAAGAAAAACAATATATATC
TAGTAAAATGACATGAAAAAAAAAATGTTGAAATATACTACTGGTGTTCATTTTCTGTCCTGTA
GTGTTGCCTTCTCCAAGAAATAAACATGTGGCTGGGAAGTGTTTAA

hide sequence

RefSeq Acc Id:

XM_008007650 ⟹ XP_008005841

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	81,686,467 - 81,778,153 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	54,064,386 - 54,156,083 (-)	NCBI

Sequence:

show sequence

AGATCTCTTTTGTTTCTTTATCTCCTTTTTATGTGCGTTGAGTGTGGCTTTCCTCCGGGATGCC
TTCCTTGGGATCAGATTTTTGTCTCTTAATGCTAATATGAGGAGGTGGACGGCAGATTGTTTGG
TTATTGTTGAATTGATTTTAAGAAATGACGAAATGCTGTTCATTTGGATTAATCCCTCGTGGTA
TGTCGAAAGAGCTTAGAAAAACTGGCAGTGAGTCGGGAAGTAGCTGTGTTTTGAGGTTTTCTCA
CGATGAGTCGGAGGAGGATATCGTGTAAAGATCTGGGCCATGCTGACTGCCAAGGGTGGCTGTA
TAAGAAAAAGGAAAAGGGAAGTTTCCTAAGCAACAAATGGAAAAAGTTCTGGGTGATACTGAAG
GGGTCGTCACTGTACTGGTATAGCAATCAAATGGCAGAGAAAGCTGATGGATTTGTCAACCTGC
CTGATTTCACTGTGGAAAGAGCATCCGAATGCAAGAAAAAGCATGCTTTTAAGATCAGCCATCC
ACAGATCAAGACCTTTTATTTTGCAGCTGAGAATGTGCAGGAAATGAATGTGTGGTTAAATAAA
CTTGGATTGGCTGTAATCCATCAGGAATCCACTACAAAGGATGAAGAATGTTACAGTGAAAGTG
AACAGGAAGATCCTGAAATAGCTGCAGAGACACCACCCCCTCACGCTTCCCAGACTCAGTCTTC
GGCTGCACAGCAGGCATCTTCATCCTCACCCAGCCTGAGTGGAACATTGTGTTCTTTCTCTTCC
CTGGAAAATACAATGAAGACACCCAGCAGTTTTCCTTCCTCCTTATCTAAAGAGAGACAGTCCT
TGCCCGACACAGTTAACAGTTTGTCTGCTGCTGAAGATGAGGGACAACCAATAACGTTTGCTGT
ACAAGTTCATTCACCTGCACCCTCAGAGGCAGGCAGCCACAAGGCCCCAGAAAACAGCTTTGTC
ACATCAGAAAGTGGATTTTTGAACTCTTTATCTAGTGATGATACTTCTTCATTGAGTAGCAATC
ATGACCATCTTACTGTCCCGGATAAGCCTGCTGGATCAAAGATCATGGACAAAGAAGAGATAAA
AGTGTCCGAAGATGACGAAATGGAGAAGCTGTACAAATCGTTAGAGCAAGCTAGTCTATCTCCT
CTTGGGGACCGGCGGCCTTCGACTAAAAAGGAGCTGAGAAAATCCTTTGTTAAGCGGTGTAAAA
ATCCATCTATAAACGAGAAACTCCACAAAATCCGAACATTGAATAGCACATTAAAGTGTAAAGA
ACATGATCTGGCCATGATTAACCAGTTGCTGGATGACCCGAAGCTGACAGCCAGGAAATACAGA
GAGTGGAAAGTCACGAACACCCTGCTGATCCAGGACATCTATCAGCAGCAGCGGGCTTCGCCTT
CCCCTGATGACACTGATGACACCCCCCAGGAACTCAAGAAATCACCTTCTTCTCCCTGTGTTGA
AAATTCCATTTGAGACACAAAGTCAGGGTTTTTTCCTCTTCTATTTTATCACGAGCAACTCTTC
AAGATATTGTAAAAGCTTACATTTTTCCTTAAAAGGAAAACTGAATCCCAGTCCTTCAAGCATC
AGCTTCCCATCTAAAGATGCACCTTACATGAAGATAATCACCAAATACAGCAGGGCTCCTCATT
CCATTTGTAACGCATCCATTGAGACTGGAATGATTGAGTTCAGTTGAAAGGCGTTTTTTGTGTT
CCTACTGGGAGCTCACGGTGATGTAGAGCTCTAGGAGGGATGTGAGAAATGTCTCTTCTGTTCC
TTGCTCTCCAGAGAATGCTATGGACAAACATCAAATTTTACCAGGAATAATTGTCCATGGAAAC
ATTCTGTTTTTCAAAAGAAGAATGTACATATGCCACTTGGCTGGGAAGCTGTGTGGCCCAAATC
ACTTTTTGAGTGGAGGAATGTTTTCTATAGCAGTGACTGCAAGGACAAACGTGGTGTTGCAGAG
CAAAAATTCCTTGCCTTTGGTATAGAATGGTGGTGCCTTTTCCACGTGTTGAGAAATACTTAAT
AGACAATGGCGTGTGGGAGAGCTGAAGGGGGAGGCGTGTTCCATATTCCACTCACTCAAAGGAC
AGCTTAGTGTTTCCACACTTTGTGCAGGTTAGGGGATCTGATTAATATTTCCTTTCCTTACAAC
AGCTAGAGAAAACATCTCATCACAATTGGCGACCTCTACTCTCTTCGAACTTTCCTACTCAACG
GTAGGAGATAGTAATATGTCCAGCAAAAAATGTCTACTGCTCTTGTCCTTGGCTGTGATCCCTA
TACATAGTGTGAATTTATATCCAGATTTCCCAGGATCAGTATTGACAAGATGACTTTGGCATCT
GAATTGTTTTAATATCTTTACTCAAAAAAAAAAAAAACCACACACAAAAAACAAAAACCAAAAA
CAAAACAACAACCCACGGAAACAACAAAAGAGTTAAACATGATGGTTTTATTTTTGTATGTTTA
TATGTCACTTGTGTGCTATGTGAATAGCTATCTATGTTTGTTATTTAAATATATTTATAGAAGT
TCAAATTACTAGTGTTTTAAAAGATGATATACTATTATATATTGTGCTTAGTATATATTTGATG
AGTCTAGACGTTTTTGCTTGAGAAAAATAGAAATACTATTGATTCACTGGTGTTACGATGTTGC
ACTATAATGTCTGAGGAATGCTCAGGAAATCTTGTGGGAAAAAAATGGGGCATGCATTCATAAT
TTTTCTTTTTCTTTCCCACCCCAAACCCCATGAGCTCTTACATTTAGATTTCTATCTCTTGTCA
GTCACTCTTTTAACCAGAAAAGGATTTTCATCTTAGATTATCCTTTCTATTAAATAAACTTTAA
GCTTTGCGCCATTTATGCCTGCAAACCTTAGATCAAAGGCAACACAACTAATGTCATCTTTTCA
TTAAAGACTAATAGAAATTTGGAAATCATTGTGGTAAAGAGAACTCATAGAGAAACAATATGAA
AGTCTTCCCTTACTAATCACCATGAATATTTCTCATCATAGGAATAACCACAACCCACCGAGTA
CCCATGTTGGCCCTGCCTACCCTTAACAAATTGTTGACATAACCTATTTTGTTTTATAGCTTCA
AAGTGTAGCTTGACATTCAAACAGAAGAAACCACTCGAATTATATCTGCAAACAAAATGGAAAT
AGTTGTTATTTCCCCAAGCTTTACTAAGAAGCCTTCATACTCTGTAAACAAACAAACAAACAAA
GAAACAAAAAACAACCTTAGCATTACGAAATAAAAATAAAAAACAAGAAGCTACTAGAAGCTTC
TCTAAGATAAGAGGCCAGGCCAATCAGTTTGGCCAGCAAACATGTGGGTACTTCTCCACCTAGG
GAAGCTAGTGAAGATGAGTTTGACCTGTGGTGACCTGACGGAGGGAACATTCGGATCCTCAGAT
TGCACCCTGATGCCCTGGTCTGGGAGAGCAGTGCTGTAACCTTTTGGCCCTGAAAACTACTGAT
TCTTTCTGTGATTAGCAGATACTAGAAGGGAAATTATTTAGGATTGGCAATGTAAAGAGTATTG
AAGGAACGGCAAATAACAATAGCAGAAATAACAGTGTGACACAAAGTACCCTTCCATCTATTTT
TCTGTGGTTTGCAACACCAACCTGTAGACTTCCAGTTTTTCTTAAATTGAAGAGCTCCAGACAC
TTTTGAGCAGGGTTTGTGAACACCTTCGAATGCTTTCCTTTGGCTTCTCTTGAAGACCTATTTC
CCCCGCCTTTCAATGTAAACTCCTTTAGTACCATTCAAACTTAAAGGCAAAAAAGATCCCTGGG
ATTACTTAGCCAAGGCTTAAAGTTATTTTTCAAAGATACGTCAAGAACGTTAGCCTAGAAGTTT
TCGCTTTGCTAGTTAAAGCTGACTGCAGAGCGTCCCAAAGTGAAAGCAAAACTGAACTTCACAA
TTTTGCACCTGGCTTTCTGGAGCCCCATTGCCTGCTCATTCGTGTTTTTCCCCCTGTAAATTCT
TTTGCTTTTGAACAGGTTGTGCTACAAAGTAGGACTGCTTCTGTGAGTTCTCAGCCTAGGATGT
GGACACTAAGACGTGGGTGGGGAGATAGACAGGAGTGAGAGGGAGAGTAGGGGACACTTTCCAT
GACACTCAATGTAGGAAGACTTGGGCTTCTCTCTCGGCCTCATGCCACTCTTCTGGTCCAAAGA
ATATTGGGAAAACTGGATTACTTTCAGCATATTTCTTGAGACTAGGTCATCTCTGAAATGCATG
GCGTAGTTTCATAGAGTCCAAGGGCCAACTCCTATACCCAGTTCTACAGTCTGTGAGCTGTGGA
ATGAGAGAGAAAACTGTGGCTGTTCAGGAAGGAAGTGGAGAACCTCTCAGCACACGTAGATCCA
AATCTGTGGCACCTGCCAAAGATTAGGATTTGGAGAGGACTCCTCTTTGGGGTTGTGAAGAGGA
CCTTTTCCCTCTATTGTTAGCGTGTAGATCCAGAACGGAGCCTGATGGGATGCCCTCACTGGTT
AATATATTGCAAATAGACATGCTAGGCCCTGCTTTGGAAGGGCCTCTGTTGCTTTAAAGAATTC
TTAGCTTTGCCCCAAGAGCTGAAATCTCAGAATAGGATCAAAGGCCTAGAAAGACTCCTAAAGT
ATAGGATTACAAAGACTCCAGGTAGCCTAAGAAAGAGATTGTGTCTGGAGTCAGATTTCAATGT
GAAACCCATGCCTTATATTTACACAGCACTTTGTAGTTTGCAAATGGGTGTGTTTTCAGCCCCC
TCCCGCTGCCCCACGCTCTACGTGAGATAATTGTGGATTATTACAGTGAAGTGCCTGGCCCAGA
GCCCCAAGTGGTAAAGCGGGAACTTGAGTCTCAGGACTCCCAGCGGCTCTGTGCCCCTTCCCTT
CTCTCCGCCCCCCACCTTGCTTCACCTGTTACCTTGTTAAGTTGCTGTTGGCACACAGCCCACT
AGGAGACCAAGAAGTTTGACTTGGAGTGTGTGTTTCACTGCACTGGGTTCAGCATAGGGCCGGC
CCTGGTGGCTGTTAGGCTACATTCTCCGTTTGAAACCTAAGGGGCCCTCTGTGCTTGAGCACAG
TCTCCTCCTAATGGCCCTGCCTCAACCTGCTGGCGGGCTGTCTGTGGATTGAGTTTTCACCTAA
TCATGCTGTGTTTCCTTTCCTTTCTTTCTGTACGTGAGACTACTTGGGAAGTGCTGTGAGATCC
TTGGATGAAAAACATGTATTTAAAGAAATGGAGAGTGTTTATTTTGTTTGCTTTTTGAGGCATG
TGCTGTCAGATGTCAGAGACCCAAGTTAGTGATTAGAGGTTGGTCCTTTGACCTTCTTCTCTTA
ATTGCTTTTCATGTAATCATGATAATTTACTCAGGTAGCACTCCAGTCACAAACAATGTCACAG
AAACAGATTCAAAGAAAAAATGTTTTTAAGTCTTGAAAAGAAGTGCTATTCAAATTTACGCCAT
GTTTAAATTTGTAGGTACATTATCTCTTAGTAAGAAAGACTTTTGTTTTTAGACGGAGTCTCAC
TCTATTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTTACTGCAACCTCTGCCTCCCGGGT
TCAAGTGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGGACTACGCCCAGCTAATTTTTATATT
TTTAGTAGAGACCGGGGTTTACCATGTTGCCCTGGCTGGTTTCAAACTCCTGACTTCAGGTGAT
CCGCCTGCCTCTGCCTCCCAAAGTGCTAAGATTACAGGCGTGAGCCACCACCCTCGGCTGAAAG
ACAGTATTTTGATAGAACCACATACATGATTTAATGAGTAATGTTAAGTACAGAAAAGCTGCCG
TATCCACATAAAGTTTTAGGGGCATTTGTTCTTCAGTCTAACAAGAATATGATACCCGATTGTG
GATTTCCAATTTATTTCTCTTCCAGTTTTTTTTTTTGTATACCTCACAGGAGAAACTGAGTCCT
AGAACTGGGAGATGACTGCCCTGCCCAGGGTTTTGTAATACATAGTTGAAAATAAAAGCCCCTG
AAACTAAATGTTTGCAGCCTGTATAAAATGGCCTGTGGAAGGGGGGTAATTTCTCTCCTCACTG
AAAGCCACTCGTCTCCTTGAATGAGACACTGAGCAGACATACGTTTCTCTGTGTCGTGGAGCCA
GGAAACATTCCCTTGCCTCTTCAGCACATCTCAGTTCTTCCCCACATGACCCCAGAACCACTTA
GAAAACACTGAAATGGATTCTTCATTGAAAGAAGCTTTATATTTCTCTTGCTGTAAGGATACTT
AACTGCTCTGTATTTGATTTTCTTTCTTTTTTTTTTTTTTTTTACCTTTAGCCCAAAAAGGAAG
TGTGCCCCATGGAAACAGCAAATGCCGTAAAATAAAAACCAGGAGTTTTAATCGCCATATATTT
TAATGTGCTTGCATGATGGGAATGTGATGTTTAGCACTGCATGGTGTTTGGGGGCAAGATATTA
ACGTGGAAATCTTAGCTTAAGTTTTTCTGTGCTCTCATGCTGTGTCAGCTACCCCTCTAAACTG
AAAAAAGAGGCATGGCTCATTTCTCTCCTGCTTTATGTTTTTGAGGTTGACTTGTAAGATAAAA
ATAAAAATAAGAAAAACAATATATATCTAGTAAAATGACATGAAAAAAAAAATGTTGAAATATA
CTACTGGTGTTCATTTTCTGTCCTGTAGTGTTGCCTTCTCCAAGAAATAAACATGTGGCTGGGA
AGTGTTTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_008005839	(Get FASTA)	NCBI Sequence Viewer
	XP_008005841	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000009615.1

RefSeq Acc Id:	XP_008005839 ⟸ XM_008007648
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RLX6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008005841 ⟸ XM_008007650
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RLX6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000009615 ⟸ ENSCSAT00000011548

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000013457	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000011548.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
InterPro	CNKSR	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
NCBI Gene	IPCEF1	ENTREZGENE
PANTHER	CNK3/IPCEF1 FUSION PROTEIN-RELATED	UniProtKB/TrEMBL
	CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS	UniProtKB/TrEMBL
Pfam	PF00169	UniProtKB/TrEMBL
PROSITE	PH_DOMAIN	UniProtKB/TrEMBL
SMART	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
UniProt	A0A0D9RLX6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD