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![]() Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 1,1-dichloroethene | decreases expression | EXP | | 6480464 | vinylidene chloride results in decreased expression of IPCEF1 mRNA | CTD | PMID:26682919 | 1-chloro-2,4-dinitrobenzene | decreases expression | ISO | RGD:1603404 | 6480464 | Dinitrochlorobenzene results in decreased expression of IPCEF1 mRNA | CTD | PMID:17374397 | 17beta-estradiol | multiple interactions | ISO | RGD:1603404 | 6480464 | [Estradiol co-treated with TGFB1 protein] results in decreased expression of IPCEF1 mRNA | CTD | PMID:30165855 | 2,2',4,4',5,5'-hexachlorobiphenyl | multiple interactions | EXP | | 6480464 | [2 more ... | CTD | PMID:25510870 | 2,2',5,5'-tetrachlorobiphenyl | multiple interactions | EXP | | 6480464 | [2 more ... | CTD | PMID:25510870 | 3,4-methylenedioxymethamphetamine | increases expression | EXP | | 6480464 | N-Methyl-3, 4-methylenedioxyamphetamine results in increased expression of IPCEF1 mRNA | CTD | PMID:20188158 | 4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid | decreases expression | ISO | RGD:1603404 | 6480464 | Am 580 results in decreased expression of IPCEF1 mRNA | CTD | PMID:16982809 | aflatoxin B1 | increases methylation | ISO | RGD:1603404 | 6480464 | Aflatoxin B1 results in increased methylation of IPCEF1 gene | CTD | PMID:27153756 | ammonium chloride | affects expression | ISO | RGD:735159 | 6480464 | Ammonium Chloride affects the expression of IPCEF1 mRNA | CTD | PMID:16483693 | antirheumatic drug | decreases expression | ISO | RGD:1603404 | 6480464 | Antirheumatic Agents results in decreased expression of IPCEF1 mRNA | CTD | PMID:24449571 | atrazine | increases expression | ISO | RGD:1603404 | 6480464 | Atrazine results in increased expression of IPCEF1 mRNA | CTD | PMID:22378314 | benzo[a]pyrene | affects methylation | ISO | RGD:1603404 | 6480464 | Benzo(a)pyrene affects the methylation of IPCEF1 intron | CTD | PMID:30157460 | buta-1,3-diene | decreases expression | EXP | | 6480464 | 1, 3-butadiene results in decreased expression of IPCEF1 mRNA | CTD | PMID:29038090 | carbon nanotube | decreases expression | EXP | | 6480464 | Nanotubes, Carbon analog results in decreased expression of IPCEF1 mRNA | CTD | PMID:25554681 | chloroprene | decreases expression | EXP | | 6480464 | Chloroprene results in decreased expression of IPCEF1 mRNA | CTD | PMID:23125180 | crocidolite asbestos | decreases expression | ISO | RGD:1603404 | 6480464 | Asbestos, Crocidolite results in decreased expression of IPCEF1 mRNA | CTD | PMID:29523930 | diazinon | increases expression | ISO | RGD:735159 | 6480464 | Diazinon results in increased expression of IPCEF1 mRNA | CTD | PMID:29108742 | dibutyl phthalate | decreases expression | EXP | | 6480464 | Dibutyl Phthalate results in decreased expression of IPCEF1 mRNA | CTD | PMID:21266533 | endosulfan | increases expression | ISO | RGD:735159 | 6480464 | Endosulfan results in increased expression of IPCEF1 mRNA | CTD | PMID:29391264 | eugenol | decreases expression | ISO | RGD:1603404 | 6480464 | Eugenol results in decreased expression of IPCEF1 mRNA | CTD | PMID:17374397 | fenamidone | decreases expression | EXP | | 6480464 | fenamidone results in decreased expression of IPCEF1 mRNA | CTD | PMID:27029645 | flutamide | increases expression | ISO | RGD:735159 | 6480464 | Flutamide results in increased expression of IPCEF1 mRNA | CTD | PMID:24793618 | N-nitrosodiethylamine | increases expression | EXP | | 6480464 | Diethylnitrosamine results in increased expression of IPCEF1 mRNA | CTD | PMID:24535843 | nickel atom | increases expression | ISO | RGD:1603404 | 6480464 | Nickel results in increased expression of IPCEF1 mRNA | CTD | PMID:25583101 | nickel sulfate | decreases expression | ISO | RGD:1603404 | 6480464 | nickel sulfate results in decreased expression of IPCEF1 mRNA | CTD | PMID:16780908, PMID:17374397 | nitrogen dioxide | decreases expression | ISO | RGD:1603404 | 6480464 | Nitrogen Dioxide results in decreased expression of IPCEF1 mRNA | CTD | PMID:27206323 | ochratoxin A | increases expression | ISO | RGD:1603404 | 6480464 | ochratoxin A results in increased expression of IPCEF1 mRNA | CTD | PMID:30559759 | ochratoxin A | decreases methylation | ISO | RGD:1603404 | 6480464 | ochratoxin A results in decreased methylation of IPCEF1 promoter | CTD | PMID:30559759 | sulforaphane | increases expression | ISO | RGD:1603404 | 6480464 | sulforafan results in increased expression of IPCEF1 mRNA | CTD | PMID:26833863 | tetrachloromethane | increases expression | ISO | RGD:735159 | 6480464 | Carbon Tetrachloride results in increased expression of IPCEF1 mRNA | CTD | PMID:31150632 | triclosan | increases expression | ISO | RGD:1603404 | 6480464 | Triclosan results in increased expression of IPCEF1 mRNA | CTD | PMID:30510588 | tungsten | decreases expression | EXP | | 6480464 | Tungsten results in decreased expression of IPCEF1 mRNA | CTD | PMID:30912803 | |
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PubMed | 8889548 10349636 11042159 11076861 11217851 12466851 16141072 16141073 18799693 19799774 21677750 27689697 |
Ipcef1 (Mus musculus - house mouse) |
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IPCEF1 (Homo sapiens - human) |
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Ipcef1 (Rattus norvegicus - Norway rat) |
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Ipcef1 (Chinchilla lanigera - long-tailed chinchilla) |
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Ipcef1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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IPCEF1 (Sus scrofa - pig) |
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D10Mit75 |
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UniSTS:236303 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001033391 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001170800 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001170801 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001170802 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001347225 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011243080 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011243081 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011243082 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017313967 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017313969 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030245126 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AA472059 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC155718 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AC164171 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK038257 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK038911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK041335 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK081159 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK135851 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK157384 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK220339 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BQ176089 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CK781068 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | NM_001033391 ⟹ NP_001028563 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CTCAGCAGCAGTAGACCTGGAGTGAGGAGCTTCCTAACATTTTGCTTCTGTTTCTGGCAGTCTGhide sequence |
RefSeq Acc Id: | NM_001170800 ⟹ NP_001164271 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
AATTAGCACATTTTGTGCCTCAGCTGGTAGCTTCCCTTGAGCTCTGCTTGGAGAGGCTTTTTTThide sequence |
RefSeq Acc Id: | NM_001170801 ⟹ NP_001164272 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
AATTAGCACATTTTGTGCCTCAGCTGGTAGCTTCCCTTGAGCTCTGCTTGGAGAGGCTTTTTTThide sequence |
RefSeq Acc Id: | NM_001170802 ⟹ NP_001164273 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
AATTAGCACATTTTGTGCCTCAGCTGGTAGCTTCCCTTGAGCTCTGCTTGGAGAGGCTTTTTTThide sequence |
RefSeq Acc Id: | NM_001347225 ⟹ NP_001334154 | |||||||||
RefSeq Status: | VALIDATED | |||||||||
Type: | CODING | |||||||||
Position: |
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RefSeq Acc Id: | XM_011243080 ⟹ XP_011241382 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
AGCTCAAGGAAGCTTTTGAACAGTACATCCTAGACTGTGTCCTTCACCAGCATAGGCAGCTGGGhide sequence |
RefSeq Acc Id: | XM_011243081 ⟹ XP_011241383 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
TTCTAATGGTGTGGCCTATCAGCTCAAGGAAGCTTTTGAACAGTACATCCTAGACTGTGTCCTThide sequence |
RefSeq Acc Id: | XM_011243082 ⟹ XP_011241384 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
GCTCAAGGAAGCTTTTGAACAGTACATCCTAGACTGTGTCCTTCACCAGCATAGGCAGCTGGGChide sequence |
RefSeq Acc Id: | XM_017313967 ⟹ XP_017169456 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
ACACTAGAGCAGTAGTATGTTTCTTTTGTGAGCCAGCAAACATTCCAAAGTTGCGGGCAGATCAhide sequence |
RefSeq Acc Id: | XM_017313969 ⟹ XP_017169458 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
TTCTAATGGTGTGGCCTATCAGCTCAAGGAAGCTTTTGAACAGTACATCCTAGACTGTGTCCTThide sequence |
RefSeq Acc Id: | XM_030245126 ⟹ XP_030100986 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Protein RefSeqs | NP_001028563 | (Get FASTA) | NCBI Sequence Viewer |
NP_001164271 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001164272 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001164273 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001334154 | (Get FASTA) | NCBI Sequence Viewer | |
XP_011241382 | (Get FASTA) | NCBI Sequence Viewer | |
XP_011241383 | (Get FASTA) | NCBI Sequence Viewer | |
XP_011241384 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017169456 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017169458 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030100986 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | BAC29953 | (Get FASTA) | NCBI Sequence Viewer |
BAD90405 | (Get FASTA) | NCBI Sequence Viewer | |
BAE22694 | (Get FASTA) | NCBI Sequence Viewer | |
BAE34075 | (Get FASTA) | NCBI Sequence Viewer | |
Q5DU31 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001028563 ⟸ NM_001033391 |
- Peptide Label: | isoform 4 |
- UniProtKB: | Q3UX69 (UniProtKB/TrEMBL) |
- Sequence: |
MATEGNAEKADGFVNLSDFTVERASECKKKNAFKINHPQIKAFYFAAENLQEMNVWLNKLGFAVhide sequence |
RefSeq Acc Id: | NP_001164271 ⟸ NM_001170800 |
- Peptide Label: | isoform 1 |
- UniProtKB: | Q5DU31 (UniProtKB/Swiss-Prot) |
- Sequence: |
MSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLShide sequence |
RefSeq Acc Id: | NP_001164272 ⟸ NM_001170801 |
- Peptide Label: | isoform 2 |
- Sequence: |
MSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLShide sequence |
RefSeq Acc Id: | NP_001164273 ⟸ NM_001170802 |
- Peptide Label: | isoform 3 |
- Sequence: |
MSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLShide sequence |
RefSeq Acc Id: | XP_011241383 ⟸ XM_011243081 |
- Peptide Label: | isoform X2 |
- Sequence: |
MATEGNVPLRQKPRKKTQGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLKhide sequence |
RefSeq Acc Id: | XP_011241384 ⟸ XM_011243082 |
- Peptide Label: | isoform X3 |
- Sequence: |
MATEGNQVPLRQKPRKKTQGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLhide sequence |
RefSeq Acc Id: | XP_011241382 ⟸ XM_011243080 |
- Peptide Label: | isoform X1 |
- Sequence: |
MATEGNQVPLRQKPRKKTQGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLhide sequence |
RefSeq Acc Id: | XP_017169456 ⟸ XM_017313967 |
- Peptide Label: | isoform X1 |
- Sequence: |
MATEGNQVPLRQKPRKKTQGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLhide sequence |
RefSeq Acc Id: | XP_017169458 ⟸ XM_017313969 |
- Peptide Label: | isoform X5 |
- Sequence: |
MATEGNQVPLRQKPRKKTQGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLhide sequence |
RefSeq Acc Id: | XP_030100986 ⟸ XM_030245126 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | NP_001334154 ⟸ NM_001347225 |
- Peptide Label: | isoform 5 |
- UniProtKB: | Q5DU31 (UniProtKB/Swiss-Prot), Q3UX69 (UniProtKB/TrEMBL) |
RGD ID: | 8671440 | |||||||||
Promoter ID: | EPDNEW_M13751 | |||||||||
Type: | initiation region | |||||||||
Name: | Ipcef1_2 | |||||||||
Description: | Mus musculus interaction protein for cytohesin exchange factors1 , transcript variant 4, mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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RGD ID: | 8671442 | |||||||||
Promoter ID: | EPDNEW_M13752 | |||||||||
Type: | initiation region | |||||||||
Name: | Ipcef1_1 | |||||||||
Description: | Mus musculus interaction protein for cytohesin exchange factors1 , transcript variant 4, mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:2444159 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000064065 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSMUSP00000077215 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000084110 | UniProtKB/TrEMBL | |
ENSMUSP00000101242 | ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSMUSP00000114267 | UniProtKB/TrEMBL | |
ENSMUSP00000118510 | UniProtKB/TrEMBL | |
ENSMUSP00000128131 | ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSMUST00000078070 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000086896 | UniProtKB/TrEMBL | |
ENSMUST00000105617 | ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSMUST00000145156 | UniProtKB/TrEMBL | |
ENSMUST00000151960 | UniProtKB/TrEMBL | |
ENSMUST00000170680 | ENTREZGENE, UniProtKB/TrEMBL | |
Gene3D-CATH | 2.30.29.30 | UniProtKB/Swiss-Prot |
InterPro | PH-like_dom_sf | UniProtKB/Swiss-Prot |
PH_domain | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:320495 | UniProtKB/Swiss-Prot |
MGD | MGI:2444159 | ENTREZGENE |
NCBI Gene | 320495 | ENTREZGENE |
Pfam | PF00169 | UniProtKB/Swiss-Prot |
PhenoGen | Ipcef1 | PhenoGen |
PROSITE | PH_DOMAIN | UniProtKB/Swiss-Prot |
SMART | SM00233 | UniProtKB/Swiss-Prot |
UniGene | Mm.331674 | ENTREZGENE |
UniProt | D3YVQ1_MOUSE | UniProtKB/TrEMBL |
D3Z0U6_MOUSE | UniProtKB/TrEMBL | |
ICEF1_MOUSE | UniProtKB/Swiss-Prot | |
Q3UX69 | ENTREZGENE, UniProtKB/TrEMBL | |
Q5DU31 | ENTREZGENE | |
UniProt Secondary | Q3TZY2 | UniProtKB/Swiss-Prot |
Q8CAP9 | UniProtKB/Swiss-Prot |
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More on Ipcef1 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: mm9 mm10 |
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MGI Report |
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NCBI Genome Data Viewer |
RGD Object Information | |
RGD ID: | 1618797 |
Created: | 2007-05-01 |
Species: | Mus musculus |
Last Modified: | 2019-11-27 |
Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.