FIGNL2 (fidgetin like 2) - Rat Genome Database

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Gene: FIGNL2 (fidgetin like 2) Chlorocebus sabaeus
Analyze
Symbol: FIGNL2
Name: fidgetin like 2
RGD ID: 18603070
Description: INVOLVED IN microtubule severing (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Cognitive Impairment with or Without Cerebellar Ataxia (ortholog); genetic disease (ortholog); FOUND IN cell leading edge (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: E3 ubiquitin-protein ligase synoviolin-like; fidgetin-like protein 2; LOC103239487
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11148,010,951 - 48,021,889 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037198,070,808 - 198,101,348 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FIGNL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11148,010,951 - 48,021,889 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037198,070,808 - 198,101,348 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
FIGNL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381251,817,899 - 51,848,718 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1251,817,899 - 51,848,718 (-)EnsemblGRCh38hg38GRCh38
GRCh371252,211,683 - 52,242,502 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361250,497,943 - 50,502,475 (-)NCBINCBI36Build 36hg18NCBI36
Celera1251,013,783 - 51,018,315 (-)NCBICelera
Cytogenetic Map12q13.13NCBI
HuRef1249,244,544 - 49,258,562 (-)NCBIHuRef
CHM1_11252,178,134 - 52,192,159 (-)NCBICHM1_1
T2T-CHM13v2.01251,781,425 - 51,812,316 (-)NCBIT2T-CHM13v2.0
Fignl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915100,948,075 - 100,976,465 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl15100,948,075 - 100,976,448 (-)EnsemblGRCm39 Ensembl
GRCm3815101,050,192 - 101,078,584 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15101,050,194 - 101,078,567 (-)EnsemblGRCm38mm10GRCm38
MGSCv3715100,882,896 - 100,884,830 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3615100,879,984 - 100,882,439 (-)NCBIMGSCv36mm8
Celera15103,199,310 - 103,201,244 (-)NCBICelera
Cytogenetic Map15F1NCBI
cM Map1556.39NCBI
Fignl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87134,038,734 - 134,066,626 (-)NCBIGRCr8
mRatBN7.27132,160,006 - 132,187,896 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7132,162,390 - 132,164,336 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7133,961,636 - 133,989,506 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07136,191,152 - 136,219,022 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07136,101,893 - 136,129,789 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0155,127,315 - 5,133,550 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7142,694,759 - 142,696,347 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.07140,494,661 - 140,501,240 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47139,805,382 - 139,807,381 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera7128,628,426 - 128,651,176 (-)NCBICelera
Cytogenetic Map7q36NCBI
Fignl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555472,205,614 - 2,234,417 (-)NCBIChiLan1.0ChiLan1.0
FIGNL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21042,346,719 - 42,377,486 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11242,343,492 - 42,374,250 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01236,914,415 - 36,945,018 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11237,698,429 - 37,718,699 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1237,716,039 - 37,718,001 (+)Ensemblpanpan1.1panPan2
FIGNL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,138,800 - 3,168,264 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2743,091,187 - 43,117,719 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0273,135,508 - 3,162,038 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1273,152,136 - 3,178,852 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0273,138,359 - 3,164,826 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02743,489,583 - 43,516,095 (-)NCBIUU_Cfam_GSD_1.0
Fignl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494563,870,170 - 63,877,428 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365129,289,926 - 9,291,931 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365129,287,391 - 9,293,741 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FIGNL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl517,180,773 - 17,182,743 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1517,178,239 - 17,209,297 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2517,773,665 - 17,787,384 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Fignl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624816487,821 - 489,773 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624816464,601 - 493,218 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_037997098   ⟹   XP_037853026
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666037198,070,808 - 198,101,348 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037853026 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037853026   ⟸   XM_037997098


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC103239487 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 FIGNL2  fidgetin like 2  LOC103239487  E3 ubiquitin-protein ligase synoviolin-like  Symbol and/or name change 5135510 APPROVED