ZNF326 (zinc finger protein 326) - Rat Genome Database

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Gene: ZNF326 (zinc finger protein 326) Chlorocebus sabaeus
Analyze
Symbol: ZNF326
Name: zinc finger protein 326
RGD ID: 18577999
Description: ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN nuclear matrix (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DBIRD complex subunit ZNF326
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12043,447,762 - 43,483,594 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2043,448,595 - 43,483,462 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603374,450,099 - 74,485,865 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ZNF326
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12043,447,762 - 43,483,594 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2043,448,595 - 43,483,462 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603374,450,099 - 74,485,865 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ZNF326
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38189,995,110 - 90,035,533 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl189,995,110 - 90,035,533 (+)EnsemblGRCh38hg38GRCh38
GRCh37190,460,669 - 90,501,092 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36190,233,266 - 90,266,682 (+)NCBINCBI36Build 36hg18NCBI36
Celera188,706,370 - 88,739,792 (+)NCBICelera
Cytogenetic Map1p22.2NCBI
HuRef188,577,877 - 88,611,300 (+)NCBIHuRef
CHM1_1190,576,010 - 90,609,429 (+)NCBICHM1_1
T2T-CHM13v2.0189,838,332 - 89,878,758 (+)NCBIT2T-CHM13v2.0
Zfp326
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395106,024,422 - 106,063,684 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5106,024,431 - 106,063,684 (+)EnsemblGRCm39 Ensembl
GRCm385105,876,556 - 105,915,818 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5105,876,565 - 105,915,818 (+)EnsemblGRCm38mm10GRCm38
MGSCv375106,305,587 - 106,344,837 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365106,116,904 - 106,156,114 (+)NCBIMGSCv36mm8
Celera5102,957,510 - 103,029,034 (+)NCBICelera
Cytogenetic Map5E5NCBI
cM Map550.88NCBI
Zfp326
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8144,246,081 - 4,286,805 (-)NCBIGRCr8
mRatBN7.2143,941,210 - 3,980,419 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl143,941,958 - 3,980,384 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0144,998,530 - 5,006,759 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0145,016,764 - 5,036,663 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl144,998,539 - 5,033,942 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0144,976,313 - 5,028,404 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera144,091,649 - 4,144,131 (-)NCBICelera
Cytogenetic Map14p22NCBI
Znf326
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554234,145,998 - 4,178,320 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554234,145,169 - 4,178,409 (-)NCBIChiLan1.0ChiLan1.0
ZNF326
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21136,990,980 - 137,029,528 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11136,151,732 - 136,185,304 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0192,656,490 - 92,693,995 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1191,405,460 - 91,438,913 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl191,405,472 - 91,438,913 (+)Ensemblpanpan1.1panPan2
ZNF326
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1658,597,606 - 58,632,781 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl658,598,416 - 58,632,776 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha661,306,237 - 61,343,925 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0658,991,407 - 59,029,111 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl658,991,686 - 59,029,075 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1658,682,678 - 58,720,428 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0658,634,913 - 58,672,669 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0659,115,669 - 59,153,389 (-)NCBIUU_Cfam_GSD_1.0
Znf326
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058100,150,106 - 100,188,552 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365378,760,834 - 8,797,730 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365378,760,311 - 8,797,869 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100737600
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4126,679,581 - 126,717,815 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14126,679,269 - 126,703,983 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24138,557,134 - 138,565,558 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Znf326
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247427,714,797 - 7,760,022 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247427,713,965 - 7,760,193 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 36 53
Low 20 7
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000017077   ⟹   ENSCSAP00000016568
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2043,448,595 - 43,483,462 (-)Ensembl
RefSeq Acc Id: XM_007978020   ⟹   XP_007976211
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12043,447,762 - 43,483,594 (-)NCBI
Vero_WHO_p1.0NW_02366603374,450,099 - 74,485,865 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038002729   ⟹   XP_037858657
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603374,457,206 - 74,485,865 (+)NCBI
RefSeq Acc Id: XM_038002733   ⟹   XP_037858661
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603374,450,099 - 74,485,865 (+)NCBI
RefSeq Acc Id: XM_038002737   ⟹   XP_037858665
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603374,450,101 - 74,485,865 (+)NCBI
RefSeq Acc Id: XM_038002739   ⟹   XP_037858667
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603374,450,101 - 74,485,865 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_007976211   ⟸   XM_007978020
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S6S9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000016568   ⟸   ENSCSAT00000017077
RefSeq Acc Id: XP_037858661   ⟸   XM_038002733
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037858667   ⟸   XM_038002739
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037858665   ⟸   XM_038002737
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037858657   ⟸   XM_038002729
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000001456 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000017077.1 UniProtKB/TrEMBL
InterPro AKAP95 UniProtKB/TrEMBL
  ZF_C2H2_AKAP95 UniProtKB/TrEMBL
KEGG Report csab:103224460 UniProtKB/TrEMBL
NCBI Gene ZNF326 ENTREZGENE
PANTHER DBIRD COMPLEX SUBUNIT ZNF326 UniProtKB/TrEMBL
  PTHR12190 UniProtKB/TrEMBL
Pfam AKAP95 UniProtKB/TrEMBL
PROSITE ZF_C2H2_AKAP95 UniProtKB/TrEMBL
UniProt A0A0D9S6S9 ENTREZGENE, UniProtKB/TrEMBL