PMVK (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mChlSab1.0.hap1 | 20 | 8,405,753 - 8,418,154 (+) | NCBI | | mChlSab1.0.hap1 | | | Vero_WHO_p1.0 | NW_023666038 | 8,229,305 - 8,242,091 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | | ChlSab1.1 | 20 | 8,893,297 - 8,906,882 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 8,894,786 - 8,906,873 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM |
|
PMVK (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 1 | 154,924,740 - 154,942,658 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 154,924,732 - 154,937,008 (-) | Ensembl | | GRCh38.p14 Ensembl | hg38 | GRCh38 | GRCh37 | 1 | 154,897,216 - 154,915,134 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 153,163,832 - 153,176,108 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 151,710,280 - 151,722,540 | NCBI | | | | | Celera | 1 | 127,968,233 - 127,980,509 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21.3 | NCBI | | | | | HuRef | 1 | 126,259,154 - 126,271,445 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 156,293,587 - 156,305,863 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 154,064,101 - 154,082,019 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Pmvk (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 3 | 89,361,848 - 89,376,321 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 89,361,758 - 89,376,323 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 3 | 89,454,541 - 89,469,014 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 89,454,541 - 89,469,013 (+) | Ensembl | | GRCm38.p6 Ensembl | mm10 | GRCm38 | MGSCv37 | 3 | 89,263,040 - 89,272,931 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 89,545,243 - 89,554,933 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 89,494,449 - 89,504,138 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | F1 | NCBI | | | | | cM Map | 3 | 39.13 | NCBI | | | | |
|
Pmvk (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 2 | 177,174,344 - 177,184,076 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 2 | 177,174,335 - 177,184,080 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 2 | 174,876,586 - 174,886,365 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 174,876,657 - 174,886,364 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 2 | 182,022,396 - 182,031,869 (+) | NCBI | UTH_Rnor_SHR_Utx | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 180,044,785 - 180,054,258 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 174,645,467 - 174,654,973 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | | | | Dahl_SR_JrHsd | 2 | 176,346,568 - 176,356,134 (+) | NCBI | | | | | Lyon_Normotensive | 2 | 176,669,859 - 176,679,365 (+) | NCBI | | | | | Lyon_Hypertensive | 2 | 176,290,365 - 176,299,931 (+) | NCBI | | | | | F344_StmMcwi | 2 | 176,372,801 - 176,382,307 (+) | NCBI | | | | | Rnor_6.0 | 2 | 188,784,329 - 188,793,890 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 188,784,222 - 188,793,895 (+) | Ensembl | | Rnor_6.0 Ensembl | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 208,198,238 - 208,207,794 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 2 | 181,655,658 - 181,665,214 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 2 | 168,817,684 - 168,827,240 (+) | NCBI | | Celera | | | RGSC_v3.1 | 2 | 181,605,763 - 181,615,319 (+) | NCBI | | | | | Cytogenetic Map | 2 | q34 | NCBI | | | | |
|
Pmvk (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955545 | 1,421,562 - 1,440,038 (-) | Ensembl | | ChiLan1.0 Ensembl | | | ChiLan1.0 | NW_004955545 | 1,421,562 - 1,440,038 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PMVK (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 1 | 94,903,218 - 94,915,762 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 94,635,585 - 94,647,862 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 130,273,246 - 130,286,614 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 133,882,837 - 133,894,818 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 133,882,840 - 133,894,818 (-) | Ensembl | | PanPan1.1 Ensembl | panPan2 | panpan1.1 |
|
PMVK (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 7 | 42,532,968 - 42,563,618 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 7 | 42,533,217 - 42,540,625 (+) | Ensembl | | CanFam3.1 Ensembl | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 42,024,242 - 42,060,899 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 42,403,302 - 42,439,920 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 42,403,373 - 42,414,566 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 7 | 42,182,992 - 42,219,593 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 42,236,594 - 42,273,239 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 42,520,185 - 42,556,794 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Pmvk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mIctTri1.hap1 | 11 | 127,493,233 - 127,502,265 (+) | NCBI | | mIctTri1.hap1 | | | HiC_Itri_2 | NW_024405058 | 25,443,172 - 25,452,234 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936580 | 4,473,359 - 4,482,631 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936580 | 4,473,554 - 4,482,396 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PMVK (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 4 | 94,861,712 - 94,874,771 (+) | Ensembl | | Sscrofa11.1 Ensembl | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 94,861,500 - 94,913,743 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 103,634,269 - 103,685,533 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
Pmvk (Heterocephalus glaber - naked mole-rat) |
| Naked Mole-Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HetGla 1.0 | NW_004624885 | 2,544,136 - 2,552,591 (+) | NCBI | HetGla 1.0 | HetGla 1.0 | hetGla2 | | HetGla_female_1.0 Ensembl | NW_004624885 | 2,543,862 - 2,553,237 (+) | Ensembl | | HetGla_female_1.0 Ensembl | hetGla2 | HetGla_female_1.0 Ensembl | Naked mole-rat maternal Ensembl | 19 | 1,682,527 - 1,689,876 (+) | Ensembl | | | | |
|
Pmvk (Rattus rattus - black rat) |
|