Symbol:
TNP2
Name:
transition protein 2
RGD ID:
18535592
Description:
ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 1C (ortholog); Landau-Kleffner syndrome (ortholog); MHC class II deficiency (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
nuclear transition protein 2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 5 10,744,762 - 10,746,244 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 5 10,744,915 - 10,746,159 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666068 19,417,005 - 19,418,243 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
TNP2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 5 10,744,762 - 10,746,244 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 5 10,744,915 - 10,746,159 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666068 19,417,005 - 19,418,243 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
TNP2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 16 11,267,857 - 11,269,325 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 16 11,267,748 - 11,269,533 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 16 11,361,714 - 11,363,182 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 16 11,269,215 - 11,270,661 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 16 11,269,214 - 11,270,661 NCBI Celera 16 11,531,105 - 11,532,551 (-) NCBI Celera Cytogenetic Map 16 p13.13 NCBI HuRef 16 11,279,446 - 11,280,892 (-) NCBI HuRef CHM1_1 16 11,361,620 - 11,363,066 (-) NCBI CHM1_1 T2T-CHM13v2.0 16 11,304,079 - 11,305,547 (-) NCBI T2T-CHM13v2.0
Tnp2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 16 10,605,799 - 10,606,519 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 16 10,605,800 - 10,606,524 (-) Ensembl GRCm39 Ensembl GRCm38 16 10,787,935 - 10,788,655 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 16 10,787,936 - 10,788,660 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 16 10,788,028 - 10,788,748 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 16 10,701,513 - 10,702,233 (-) NCBI MGSCv36 mm8 Celera 16 11,415,373 - 11,416,093 (-) NCBI Celera Cytogenetic Map 16 A1 NCBI cM Map 16 5.83 NCBI
Tnp2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 5,386,735 - 5,387,463 (+) NCBI GRCr8 mRatBN7.2 10 4,879,812 - 4,880,540 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 4,879,812 - 4,880,538 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 9,576,387 - 9,577,115 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 9,097,503 - 9,098,231 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 4,735,784 - 4,736,512 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 4,953,898 - 4,954,626 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 4,953,879 - 4,954,624 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 3,780,384 - 3,781,112 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 4,816,612 - 4,817,340 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 4,816,611 - 4,817,338 (+) NCBI Celera 10 3,901,408 - 3,902,136 (+) NCBI Celera Cytogenetic Map 10 q11 NCBI
Tnp2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955442 7,311,826 - 7,314,046 (+) NCBI ChiLan1.0 ChiLan1.0
TNP2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 18 11,817,009 - 11,819,356 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 16 15,587,457 - 15,589,800 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 16 10,209,801 - 10,211,466 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 16 11,431,694 - 11,433,158 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 16 11,431,822 - 11,433,087 (-) Ensembl panpan1.1 panPan2
TNP2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 31,498,361 - 31,498,740 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 31,426,715 - 31,499,842 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 32,881,238 - 32,881,617 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 31,680,942 - 31,682,492 (+) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 6 31,494,292 - 31,494,671 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 31,368,582 - 31,368,961 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 31,792,757 - 31,794,307 (+) NCBI UU_Cfam_GSD_1.0
TNP2 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 31,870,068 - 31,871,702 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 31,868,517 - 31,871,530 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 32,659,663 - 32,661,176 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3 Pig Cytomap 3 p13-cent NCBI
Tnp2
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000006442 ⟹ ENSCSAP00000004646
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 5 10,744,915 - 10,746,159 (-) Ensembl
RefSeq Acc Id:
XM_037989854 ⟹ XP_037845782
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666068 19,417,005 - 19,418,243 (+) NCBI
Ensembl Acc Id:
ENSCSAP00000004646 ⟸ ENSCSAT00000006442
RefSeq Acc Id:
XP_037845782 ⟸ XM_037989854
