Symbol:
BSX
Name:
brain specific homeobox
RGD ID:
18507092
Description:
ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chromosome 11 partial duplication syndrome (ortholog); Dwarfism (ortholog); schizophrenia (ortholog); FOUND IN nucleus (inferred); transcription regulator complex (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
brain-specific homeobox protein homolog
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 114,366,225 - 114,373,943 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 114,368,217 - 114,372,282 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666043 11,756,497 - 11,762,214 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
BSX (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 114,366,225 - 114,373,943 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 114,368,217 - 114,372,282 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666043 11,756,497 - 11,762,214 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
BSX (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 11 122,977,570 - 122,981,834 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 11 122,977,570 - 122,981,834 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 11 122,848,278 - 122,852,542 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 11 122,353,567 - 122,357,589 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 11 120,007,843 - 120,011,864 (-) NCBI Celera Cytogenetic Map 11 q24.1 NCBI HuRef 11 118,791,194 - 118,795,215 (-) NCBI HuRef CHM1_1 11 122,734,114 - 122,738,138 (-) NCBI CHM1_1 T2T-CHM13v2.0 11 123,005,290 - 123,009,556 (-) NCBI T2T-CHM13v2.0
Bsx (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 40,782,994 - 40,790,258 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 40,785,423 - 40,791,353 (+) Ensembl GRCm39 Ensembl GRCm38 9 40,874,127 - 40,878,962 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 40,874,127 - 40,880,057 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 40,682,210 - 40,686,055 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 40,625,196 - 40,629,041 (+) NCBI MGSCv36 mm8 Celera 9 38,108,339 - 38,112,231 (+) NCBI Celera Cytogenetic Map 9 A5.1 NCBI cM Map 9 21.65 NCBI
Bsx (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 50,151,204 - 50,154,960 (+) NCBI GRCr8 mRatBN7.2 8 41,254,105 - 41,257,861 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 41,254,105 - 41,257,861 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 46,753,980 - 46,757,730 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 45,032,569 - 45,036,319 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 42,900,173 - 42,903,923 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 45,061,670 - 45,065,430 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 45,061,670 - 45,065,430 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 43,548,484 - 43,552,239 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 8 43,855,822 - 43,860,107 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 8 40,853,382 - 40,857,138 (+) NCBI Celera Cytogenetic Map 8 q22 NCBI
Bsx (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955412 23,797,630 - 23,801,479 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955412 23,796,973 - 23,801,479 (-) NCBI ChiLan1.0 ChiLan1.0
BSX (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 9 123,675,988 - 123,683,677 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 11 124,780,810 - 124,788,435 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 11 117,807,856 - 117,815,571 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 11 121,731,049 - 121,735,101 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 11 121,731,049 - 121,735,101 (-) Ensembl panpan1.1 panPan2
BSX (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 11,365,635 - 11,369,575 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 11,365,805 - 11,369,575 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 11,421,482 - 11,425,252 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 11,316,513 - 11,320,283 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 11,316,513 - 11,320,283 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 11,419,843 - 11,423,613 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 11,358,923 - 11,362,696 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 11,396,771 - 11,400,541 (+) NCBI UU_Cfam_GSD_1.0
BSX (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 9 49,905,428 - 49,909,226 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 9 49,873,031 - 49,910,581 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 9 55,249,305 - 55,254,781 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
Bsx (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000000431 ⟹ ENSCSAP00000015628
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 1 114,368,217 - 114,372,282 (-) Ensembl
RefSeq Acc Id:
XM_008021260 ⟹ XP_008019451
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 1 114,366,225 - 114,373,943 (-) NCBI Vero_WHO_p1.0 NW_023666043 11,756,497 - 11,762,214 (+) NCBI
Sequence:
CAATCCTCCCCCCTCAGCCTCCAAAAGTGCTAGGATTACAGACGTGAGTCACCACACTGGGCCTCTTCTCTTCTTACTATTAGAGTTTTTTTAAAATCACATTTTGGACTTCAGGTCAAAGCATTCTG ATTTCATTTAGATGCCTACTTGCCAAGATCTTATTTTAAAGTCTCCCTCACATCCCTTCCTCCTTCCTCTCAAGCTCTTCATCTACTTACCATTTACCAGTTCATCCTTATGGAATAGAATGCTGCCA CTTCCTAGTGCACTGTAGTTTGGGGCCTAATTGATTCTGGTAATTAATTTGTTCTACCTGCTAGATCAGATGGAAATCCTACCCATGCGCCCCAGGATTAGCACTTGGCTTTCTAACACCTCCTCTAA TTATCTAATAGCATGGGTTGTGAGGACTCAGTCTCTATTAAAACACTTTTACTATTAGCAGTAGTGATTGGAATTGTGATGATGACTAGATTTCAACAAATTAGAGCTTAAAAATGGGGAGATGGGAG AGAAGTGGCTTCTTTTAATTTCCCTGAGTTTAACATCAATAATTAGAGCAATTTTCGGAGATGTGAGCTGAAATTACCCCTGCTGTGTTGTAGATGATCACCCTAATTTTAGCAAATTGACTCCAGGG AAATAAATGTGACAGATTAGAAAAACACAAACAGAAAAAAAATGAAAGATTGGTAGGGACAGAAATGAGAGGAAAGAGGCTGGGAAAGAGGAGTGGGAAACAAAAACGTAGTACAATTATTTCGGGGG CTAGGGTTGAAAAAGTAACAGCAGAAATAGCAAACTGTGTGAGTGAAATGAGGAGAAAGTAAATATTTGAGGGGACATGGAGGATGGCACTAAGAGATGACTCTGGACATATTTACACAGACCAAATA ACTTGACTAATGTAGACATAACCCTCCTCCTGCCCACTGCCTATAACTGAGGTAAAGACTGTTATGACGACCATCATCATTTTCTTTCTTTACCTTAATAATCCAGTCATCCCTCAGCCATAAACTTA AGTAGAATCTAGCAATTTGAAGTATCAGGTGCCCTTTCTCCTCACTTCCTCCCTTCTTTTTTTGCCACCAAAATTATGGAAACTCTTAAAACCCAGGCCTAAATGCCTGAATAAGTGCTTTATCCCTA TTGCTTTGGTGCCCTTTTAGTGCCTTCTCCTCTGTAAAGAGGAGTTTGCCGGACAACAGAGACTTTTTCCTTTTAGCTTTCTTTTAAAAACGACTGGGAACAAAGCAGCCCCTGCAGTGACGGGGCAG AAATTGAGGTCAAGAAACCTGGTAGGAACAAGAACCCTGCGGACTCTGTAGTTCCCAGGCTTGGCCGGTGGTGTTCAGCACCGCGGACAGCTCCCCGCCCCGCCCCGAGCCTCTCGCACCCTCCCCTC TGCCTCTGGCAGCCTCGTCATTGGCTCTCCCCGCTCCCCTCTCCAAGCTGCCAATTCTCCAACACAGAGACCCAACCTACCCAGGAGCTTGTCTTCTTGCCTCTCCAGCGCCGGGGGTAGCCCAGGCC CGGGAGAGAGCAGAGGAGATTCGAGCCTCGGAGGGTGGTTGCTGGCTTTCGAGCAGGCTTGAAGACTCTGCCTGCGTCCTCCACTTCGTCCCGGCCCTTGTCCTGTGGCAGGTGCTCTGCTCAAGATG AATCTCAACTTCACCTCTCCTCTACACCCAGCGTCTTCTCAGAGGCCCACATCCTTCTTCATCGAGGACATCCTGCTGCACAAGCCCAAGCCGCTGAGGGAGGTGGCCCCAGACCATTTCGCCAGCTC TCTGGCCTCTCGGGTGCCTCTGCTAGACTATGGCTACCCCCTCATGCCCACACCCACCCTCTTGGCTCCTCACGCCCATCACCCTCTGCATAAGGGAGACCACCACCATCCTTATTTCCTCACCACCT CGGGGATGCCCGTCCCAGCGCTGTTCCAGCACCCACAGCACGCGGAGCTGCCGGGGAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTTTCTCTGACTCGCAGCTCTCGGGCTTGGAGAAGAGGTTC GAGATCCAGCGCTACCTGTCCACGCCAGAGCGAGTGGAACTGGCCACGGCCCTCAGCCTGTCCGAGACGCAGGTGAAAACATGGTTCCAGAACCGGCGAATGAAGCATAAAAAGCAACTGCGGAAAAG CCAAGACGAACCCAAAGCACCAGACGGGCCAGAAAGCCCCGAGGGCAGCCCCCGCGGTTCAGAGGCCGCAGCCGCCGAGGCTCGGCTGAGCCTGCCCGCCGGCCCCTTCGTGCTGACCGAGCCAGAGG ACGAGGTGGACATTGGAGACGAGGGGGAGCTGGGCTCAGGGCCGCACGTGCTCTGAGTCGCCAGGCTGGGGAGGGTGGTAGGCAGGGGAGGAGACTGTGGGGCGGAGCGCCGTTCCCTCCCAGACGGG AAGACTCAGACTCCAGTCTCGTGGCGGGCCTTGGAGATTCGCTCCTGGAAGACAAACAAAACCCACCTGTCCTCCAGGCCGGTGCGGAGCCAGTGCGGCCCGCGGCCCGGCCTCCCGCTTCCCCTGTC GCCCTCCCGGTCCCAGCCACTGGAGAGTGTGCGCCCGGGCGCGCATTTTCCTGCGTCCGTCGTCCTTGGGGTCGGGGACCAGCCCAGTACCGCGTCCGAGACTGGAAATTCGACTTTCGGCTCTCTGT TTTCTCCGATCAGACACCCCTTTCTCCCTTGCCTCTCAGCAACTTGCCCCTAGCTCTGTTCTTTCCTCACCATGCCAACTCCTTGCCCTTTCTTGGGCAGTCCGTTTGGCTGCAAAGAGACCAGGTCT CTGGGTCCTCCGCTCCGCGGGGATCCAGATAGAACCGCAATCTGATCTTTAAAACGTCCAGTGTCAGGACAGACTCATGCACTGCTCGTTACTCACCTCCCGCTCGCTCCCATCCCCCATGCCCCAGT CTCATCTCGGACTCAAATACGAAGGCGACTCCCCCCTTCTCTGGGCGGCGCTTCCATCCTCTCTCGTCCCTGTTCTCCGCTAGAGCTCGCGGTTCTGCATCCTGGCACCCTTCCTCAGCTTGTGGCCC CCAGGCGCAGACGCCCCTTATGCCCTGTGTCCCGCGTACTGCGCGGCGCCAGCGCGCGGCGGGAAACTTGGGCACTGAAAACCCTTAGAGCAATTTCTGCTTCCCGAACTTCTTGCGCTCCTGTCCCG CAACGCTTCCACGTTCCACGGGCTACTGATATTTTAAAATTGAGTGTTCCTCGGGTTGTGTGTGGAAATACTCATTCTCAGTGCATTTTAGGAAATCAAGATGAAGGCCAAAGGGTTAAGGCTAAAGG CGTTCGGGCGTGCACCTGTTTGGGGACTTAGATGGGACAGGGGTCTGATTGACTTTGCGCTTTACCCCTCTCCTTTTCCCCTGGGAGTTCTCTTATTCTTTTACCGGGTTTGTAGTCTCTTAGATAAT GAAAGGCTCGCCAGGCAAAACTGGGAACGATCACGCGTTTCCAGGAATGGTTTGCTACTGTGTCCTCTCACGCGTAGGCCCCCTCCCCTCGGTCCTAGGCAGTTTCCTAGTCCCTGTAGAAATGAACT TGCGAATAACCTTTCATTAACAGATCCCCTCCCTCTCACTCCAATTTTTCTGTTTCTAATCGTTTGATTAATGGTCTTGAGTTCCACTTACGTGGAAAAGTGGCTCTGGTATTTTGTGGCTCTGAAAT GCTGAAGAGACAGAGATGTACTGATATTTGGAGTTTGAAATTATACTACCGAATTGTGTGATGACCCTACACACTCAGTACACATATCAAACATAGCAGCTGCGCCAGAGGCACTCTCACCTTCTGAT TCTTTCGCTTCTGGTTGTGTTTTTAGGTAAGTGAGCCCGGGAAGGCTGGAAAAGAATGAGTAGGACTGAGTGGAATCCTGACCCTCGGGTTCTAGTGATTAATAATAATTATATAAACAATAGTGGGT GTGAGCTTGGGTTAATCTTTTTGTTTTCTTATTTCTCCAATATGGGGGTGAATCCTAAAGATCATTTTAGGTCTAAGTTCTATACTTATGTGAATGTAGCGGGAGGCCTTTTCATTTTTCTGCAATAG GCTTGTTGGAGAAACATTATCCCAGGTAAAGATAAGTGTCAGCCTGACAGCTTATCCAGGTGCATCATGTAGGAGGCAAAATTATTGGTTTTAAAACATAAGCATTGTATAGCCTTTTGGATTTTCCA AAGTGCTCTGTAATCAATCAATGATCTTGTTAGTCTCAGATGACATCTGTATTTTCCCCTTTCATAGATGGGGAAATTGAGGCTTAGCAAGATTGAAGGATTTACTCATGAAACCAGGACTAGCTGAC
hide sequence
RefSeq Acc Id:
XP_008019451 ⟸ XM_008021260
- UniProtKB:
A0A0D9S439 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCSAP00000015628 ⟸ ENSCSAT00000000431