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Gene: WARS1 (tryptophanyl-tRNA synthetase 1) Chlorocebus sabaeus

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Symbol:

WARS1

Name:

tryptophanyl-tRNA synthetase 1

RGD ID:

18490210

Description:

ENCODES a protein that exhibits aminoacyl-tRNA ligase activity (inferred); ATP binding (inferred); kinase inhibitor activity (inferred); INVOLVED IN negative regulation of protein kinase activity (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tryptophan--tRNA ligase, cytoplasmic; WARS

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	78,296,154 - 78,340,683 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	78,295,741 - 78,339,732 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	65,436,415 - 65,479,619 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant distal hereditary motor neuronopathy 9 (ISO)

Developmental Disabilities (ISO)

genetic disease (ISO)

NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND SPEECH DELAY, WITH OR WITHOUT BRAIN ABNORMALITIES (ISO)

papillary thyroid carcinoma (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of protein kinase activity (ISO)

positive regulation of gene expression (IEA)

positive regulation of protein-containing complex assembly (IEA)

regulation of angiogenesis (IEA)

translation (IEA)

tryptophanyl-tRNA aminoacylation (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

nucleus (IEA)

protein-containing complex (IEA)

Molecular Function

aminoacyl-tRNA ligase activity (IEA)

ATP binding (IEA)

kinase inhibitor activity (IEA)

protein binding (ISO)

protein domain specific binding (IEA)

protein homodimerization activity (IEA)

protein kinase binding (IEA)

tryptophan-tRNA ligase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

tryptophan metabolic pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

WARS1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	78,296,154 - 78,340,683 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	78,295,741 - 78,339,732 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	65,436,415 - 65,479,619 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

WARS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	100,333,790 - 100,376,327 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	100,333,790 - 100,376,805 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	100,800,127 - 100,842,664 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	99,869,878 - 99,912,433 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	99,869,877 - 99,911,680	NCBI
Celera	14	80,854,751 - 80,897,310 (-)	NCBI		Celera
Cytogenetic Map	14	q32.2	NCBI
HuRef	14	80,981,470 - 81,024,059 (-)	NCBI		HuRef
CHM1_1	14	100,737,895 - 100,780,446 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	94,566,811 - 94,609,425 (-)	NCBI		T2T-CHM13v2.0

Wars1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	108,825,956 - 108,860,095 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	108,825,956 - 108,860,100 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	108,860,030 - 108,894,175 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	108,860,030 - 108,894,174 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	110,098,240 - 110,132,384 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	109,307,841 - 109,341,004 (-)	NCBI		MGSCv36	mm8
Celera	12	110,098,849 - 110,127,409 (-)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	59.66	NCBI

Wars1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	133,540,463 - 133,571,645 (-)	NCBI		GRCr8
mRatBN7.2	6	127,776,088 - 127,807,273 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	127,776,090 - 127,807,269 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	127,899,086 - 127,930,096 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	128,194,132 - 128,225,140 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	127,553,503 - 127,584,499 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	132,771,026 - 132,802,262 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	132,771,021 - 132,802,210 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	141,941,102 - 141,972,312 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	133,200,866 - 133,232,048 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	133,207,052 - 133,238,235 (-)	NCBI
Celera	6	125,326,985 - 125,358,157 (-)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

Wars1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	21,414,815 - 21,445,042 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955438	21,414,878 - 21,445,417 (-)	NCBI	ChiLan1.0	ChiLan1.0

WARS1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	101,485,389 - 101,526,405 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	100,701,881 - 100,742,894 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	80,954,852 - 80,996,316 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	100,268,845 - 100,310,662 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	100,268,845 - 100,310,662 (-)	Ensembl	panpan1.1		panPan2

WARS1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	68,610,105 - 68,644,616 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	68,610,090 - 68,643,467 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	68,128,827 - 68,162,983 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	68,893,954 - 68,928,323 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	68,893,953 - 68,928,235 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	68,555,815 - 68,590,006 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	68,621,956 - 68,656,146 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	69,019,419 - 69,053,607 (-)	NCBI		UU_Cfam_GSD_1.0

Wars1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	6,065,559 - 6,097,465 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936604	3,984,872 - 4,016,911 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936604	3,985,002 - 4,016,870 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WARS1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	121,212,981 - 121,238,113 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	121,212,981 - 121,238,144 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	128,677,569 - 128,702,996 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Wars1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	3,782,733 - 3,817,852 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	3,777,866 - 3,815,369 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in WARS1
703 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007987840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007987841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007987842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007987844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037984508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037984509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037984510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000008428 ⟹ ENSCSAP00000006574

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	24	78,295,741 - 78,339,732 (-)	Ensembl

RefSeq Acc Id:

XM_007987840 ⟹ XP_007986031

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	24	78,296,154 - 78,339,924 (-)	NCBI
Vero_WHO_p1.0	NW_023666053	65,436,415 - 65,478,898 (-)	NCBI

Sequence:

show sequence

CTCGATTCTCAGGAGGGTTTCATTGGTCTCAGCCTGGTCCCAGGCAGCCCACCTCTGATTGGAC
AGTCTCATCAAGAAGGTTGGTCAGGAGCTCAAGTGTTTCCGAGAATCAGGGCGATTTATAAGAA
AAGTTTAGCTGAATGCAGGGTGGGGACTGGTAAACAAAAGAAAGAGAAAAGTCTCTTTTTTCAG
AAGGGAAACTGAAAGAAAGAGGGGAAGAGTATTAAAGACCATTTCTGGCTGGGCTGGGCATTCT
CAGCTGCTCTACTGCCCAGCGTGACCAGTGGCCACCTCTGCAGAGTCTTCCACAACGTGGTGTT
GACTGTCTGCTGAACGAAGCCTCTGACCTCAGGCTGGCCGTGAACGTAGTTCCTGAGAGATGGC
AAACATGCCCAACAGCAAGCCCTGTGCCTCTCCGCTGGAGCTGTTCAACAGCATCGCCACACAA
GGGGAGCTCGTGAGGTCCCTCAAAGCGGGAAATGCGTCAAAGGATGAAATTGATTCTGCAGTAA
AGATGTTGCTGTCGTTAAAAATGAGCTACAAAGCTGCCATGGGGGAGGATTACAAGGCTGACTG
TCCTCCAGGGAACCCAGCACCTACCAGTAATCATGGCCCAGATGCCGCAGAAGCTGAAGAGGAT
TTTGTGGACCCATGGACAGTACAGACGAGCAGTGCAAAAGGCATAGACTATGATAAGCTCATTG
TTCGGTTTGGAAGCAGTAAAATTGACAAAGAGCTAATAAACCGAATAGAGAGAGCCACCGGCCA
AAGACCACACCGCTTCCTGCGCAGAGGCATCTTCTTCTCACACAGAGACATGAATCAGGTTCTC
GATGCCTATGAAAATAAGAAGCCGTTTTATCTGTACACGGGCCGGGGCCCCTCTTCTGAAGCCA
TGCATGTGGGTCACCTCATTCCGTTTATTTTCACAAAGTGGCTCCAGGATGTGTTTAACGTGCC
CTTGGTCATCCAGATGACGGATGACGAGAAGTATCTGTGGAAGGACCTGACCCTAGATCAGGCC
TATGGCTATGCTGTGGAGAATGCCAAGGACATCATTGCCTGTGGCTTTGACATCAACAAGACTT
TCATATTCTCTGACCTGGACTACATGGGGATGAGCTCAGGTTTCTACAAAAATGTGGTGAAGAT
TCAAAAGCATGTTACCTTCAACCAAGTGAAAGGCATTTTCGGCTTCACTGACAGCGACAGCATC
GGGAAGATCAGTTTTCCTGCCATCCAGGCTGCTCCCTCCTTCAGCAACTCATTCCCACAGATCT
TCCAAGACAGGACAGATATCCAGTGCCTTATCCCATGTGCCATTGACCAGGATCCTTACTTTAG
AATGACGAGGGACGTCGCCCCCAGGATCGGCTATCCTAAACCAGCCCTGCTGCACTCCACCTTC
TTCCCTGCCCTGCAGGGCGCTCAGACCAAAATGAGTGCCAGCGACCCCAACTCCTCCATCTTCC
TCACTGACACGGCAAAGCAGATCAAAACCAAGGTCAATAAGCATGCATTTTCTGGAGGGAGAGA
CACCATCGAGGAGCACAGGCAGTTTGGGGGCAACTGTGATGTGGATGTGTCTTTCATGTACCTG
ACCTTCTTCCTCGAGGACGACGACAAGCTCGAGCAGATCAGGAAGGATTACACCAGCGGAGCCA
TGCTCACCGGTGAGCTCAAGAAGGTACTCATAGAGGTTCTCCAGCCCTTGATCGCAGAGCACCA
GGCCCGGCGCAAGGAGGTCACGGACGAGATAGCAAAAGAGTTCATGACTCCCCGGGAGCTGTCC
TTCGACTTTCAGTAGCACTCGTTTTACATATGCTTATAAAAGAAGTGATGTATCAATAATCCCA
GCCCAGTCAAAGCACTGCCACCCGTAGGCTTCTGTCTCATGATTATCATTGGGCCTGGTCTCTG
TAAGCCTGTGTATGTTATCAGTACTGTTTCTTCCTGTGAGTTCCATTATTTCTGTCTCTTATGG
GCAAAGCATTGTGGGTGATCGGTGCTGGCTAACATTGCATGGTCAGATAGAGAAGTCCAGCTGT
GAGTCTCTCCCCAGAGCAGCCCCCAAAGAGTGGAGCCTTTGGCTGGAAGTCCATGGACCACCCT
GTTCTGGTCCGTGGAGGACTCCGAGGGTTCCAAGTATACTCTTAAGACCCACTCTGTTTAAAAA
TATATATTCTATGTGTGCATATATGGAATTGAAATGTCATTATTGTAACCTAGAAAGTGCTTTC
AAACATCGATGTGGGGAGGTTTATTGAGCACAAGTTGTATTTCAGCCCACACCCCCTCCCAAAA
GAAATTGGTAAGTAAAAGCTTTGCTCTACATTTGACTAAGAAATCACCCAGCTTTCAAGCTGCT
TTTAACAATGAAGATTGAACAGAGTTGAGCAATTTTGATTAATTGAGACTTAGGGGTGAAACTG
TTCAGTTTACTGAACTCCAGACCATGCATGTATTCCACTCCAGAAATCAGCTCGCTTCCCTTGG
CGTACCAGTATTCTCCCGCCAGATGACCCTAGACCCTCTGTCCTGCAGAATCAGGGTGGCTTTT
CCCCGACTGTGTCCGATGCCAAGGAGTCCTGGCCTTTGCAGATGCTTCATGTTGATCCTTGGCT
GCAGTGGAAGTCAGCACAGAGCAGTGCCCTGGCTGTGTCCCTGGACGGGTGGACTTAGCTAGGG
AGAAAGTCGAGGCAGCAGCCCTCGAGGCCCTCACAGGTGTCTAGGCAGGCCTCATTTCATCACG
CACCATGAGCAGGTCTGGAAGAGCAAAGCCCAATCTCAGGGAAGCCCGTGGTTGATGTGTCTGG
GTCTGCTCTGGAGCACTCTGCCCTCCTGTCGCCCAGTAGAGTAAATAAACTTCCTTGGCTCCCG
C

hide sequence

RefSeq Acc Id:

XM_007987841 ⟹ XP_007986032

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	24	78,296,154 - 78,340,633 (-)	NCBI
Vero_WHO_p1.0	NW_023666053	65,437,092 - 65,479,566 (-)	NCBI

Sequence:

show sequence

GTCTGAGCCGGGAGTGCTGACGGGCCCGGCTGGGCCGGAAGGGAAACTGAAAGAAAGAGGGGAA
GAGTATTAAAGACCATTTCTGGCTGGGCTGGGCATTCTCAGCTGCTCTACTGCCCAGCGTGACC
AGTGGCCACCTCTGCAGAGTCTTCCACAACGTGGTGTTGACTGTCTGCTGAACGAAGCCTCTGA
CCTCAGGCTGGCCGTGAACGTAGTTCCTGAGAGATGGCAAACATGCCCAACAGCAAGCCCTGTG
CCTCTCCGCTGGAGCTGTTCAACAGCATCGCCACACAAGGGGAGCTCGTGAGGTCCCTCAAAGC
GGGAAATGCGTCAAAGGATGAAATTGATTCTGCAGTAAAGATGTTGCTGTCGTTAAAAATGAGC
TACAAAGCTGCCATGGGGGAGGATTACAAGGCTGACTGTCCTCCAGGGAACCCAGCACCTACCA
GTAATCATGGCCCAGATGCCGCAGAAGCTGAAGAGGATTTTGTGGACCCATGGACAGTACAGAC
GAGCAGTGCAAAAGGCATAGACTATGATAAGCTCATTGTTCGGTTTGGAAGCAGTAAAATTGAC
AAAGAGCTAATAAACCGAATAGAGAGAGCCACCGGCCAAAGACCACACCGCTTCCTGCGCAGAG
GCATCTTCTTCTCACACAGAGACATGAATCAGGTTCTCGATGCCTATGAAAATAAGAAGCCGTT
TTATCTGTACACGGGCCGGGGCCCCTCTTCTGAAGCCATGCATGTGGGTCACCTCATTCCGTTT
ATTTTCACAAAGTGGCTCCAGGATGTGTTTAACGTGCCCTTGGTCATCCAGATGACGGATGACG
AGAAGTATCTGTGGAAGGACCTGACCCTAGATCAGGCCTATGGCTATGCTGTGGAGAATGCCAA
GGACATCATTGCCTGTGGCTTTGACATCAACAAGACTTTCATATTCTCTGACCTGGACTACATG
GGGATGAGCTCAGGTTTCTACAAAAATGTGGTGAAGATTCAAAAGCATGTTACCTTCAACCAAG
TGAAAGGCATTTTCGGCTTCACTGACAGCGACAGCATCGGGAAGATCAGTTTTCCTGCCATCCA
GGCTGCTCCCTCCTTCAGCAACTCATTCCCACAGATCTTCCAAGACAGGACAGATATCCAGTGC
CTTATCCCATGTGCCATTGACCAGGATCCTTACTTTAGAATGACGAGGGACGTCGCCCCCAGGA
TCGGCTATCCTAAACCAGCCCTGCTGCACTCCACCTTCTTCCCTGCCCTGCAGGGCGCTCAGAC
CAAAATGAGTGCCAGCGACCCCAACTCCTCCATCTTCCTCACTGACACGGCAAAGCAGATCAAA
ACCAAGGTCAATAAGCATGCATTTTCTGGAGGGAGAGACACCATCGAGGAGCACAGGCAGTTTG
GGGGCAACTGTGATGTGGATGTGTCTTTCATGTACCTGACCTTCTTCCTCGAGGACGACGACAA
GCTCGAGCAGATCAGGAAGGATTACACCAGCGGAGCCATGCTCACCGGTGAGCTCAAGAAGGTA
CTCATAGAGGTTCTCCAGCCCTTGATCGCAGAGCACCAGGCCCGGCGCAAGGAGGTCACGGACG
AGATAGCAAAAGAGTTCATGACTCCCCGGGAGCTGTCCTTCGACTTTCAGTAGCACTCGTTTTA
CATATGCTTATAAAAGAAGTGATGTATCAATAATCCCAGCCCAGTCAAAGCACTGCCACCCGTA
GGCTTCTGTCTCATGATTATCATTGGGCCTGGTCTCTGTAAGCCTGTGTATGTTATCAGTACTG
TTTCTTCCTGTGAGTTCCATTATTTCTGTCTCTTATGGGCAAAGCATTGTGGGTGATCGGTGCT
GGCTAACATTGCATGGTCAGATAGAGAAGTCCAGCTGTGAGTCTCTCCCCAGAGCAGCCCCCAA
AGAGTGGAGCCTTTGGCTGGAAGTCCATGGACCACCCTGTTCTGGTCCGTGGAGGACTCCGAGG
GTTCCAAGTATACTCTTAAGACCCACTCTGTTTAAAAATATATATTCTATGTGTGCATATATGG
AATTGAAATGTCATTATTGTAACCTAGAAAGTGCTTTCAAACATCGATGTGGGGAGGTTTATTG
AGCACAAGTTGTATTTCAGCCCACACCCCCTCCCAAAAGAAATTGGTAAGTAAAAGCTTTGCTC
TACATTTGACTAAGAAATCACCCAGCTTTCAAGCTGCTTTTAACAATGAAGATTGAACAGAGTT
GAGCAATTTTGATTAATTGAGACTTAGGGGTGAAACTGTTCAGTTTACTGAACTCCAGACCATG
CATGTATTCCACTCCAGAAATCAGCTCGCTTCCCTTGGCGTACCAGTATTCTCCCGCCAGATGA
CCCTAGACCCTCTGTCCTGCAGAATCAGGGTGGCTTTTCCCCGACTGTGTCCGATGCCAAGGAG
TCCTGGCCTTTGCAGATGCTTCATGTTGATCCTTGGCTGCAGTGGAAGTCAGCACAGAGCAGTG
CCCTGGCTGTGTCCCTGGACGGGTGGACTTAGCTAGGGAGAAAGTCGAGGCAGCAGCCCTCGAG
GCCCTCACAGGTGTCTAGGCAGGCCTCATTTCATCACGCACCATGAGCAGGTCTGGAAGAGCAA
AGCCCAATCTCAGGGAAGCCCGTGGTTGATGTGTCTGGGTCTGCTCTGGAGCACTCTGCCCTCC
TGTCGCCCAGTAGAGTAAATAAACTTCCTTGGCTCCCGC

hide sequence

RefSeq Acc Id:

XM_007987842 ⟹ XP_007986033

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	24	78,296,154 - 78,340,683 (-)	NCBI
Vero_WHO_p1.0	NW_023666053	65,437,097 - 65,479,619 (-)	NCBI

Sequence:

show sequence

AGTTGTTCCGTCCGGATGGCGTTTCCACGGACGCCCCGGAGACAACCCGTGTCTGAGCCGGGAG
TGCTGACGGGCCCGGCTGGGCCGGTGTTGACTGTCTGCTGAACGAAGCCTCTGACCTCAGGCTG
GCCGTGAACGTAGTTCCTGAGAGATGGCAAACATGCCCAACAGCAAGCCCTGTGCCTCTCCGCT
GGAGCTGTTCAACAGCATCGCCACACAAGGGGAGCTCGTGAGGTCCCTCAAAGCGGGAAATGCG
TCAAAGGATGAAATTGATTCTGCAGTAAAGATGTTGCTGTCGTTAAAAATGAGCTACAAAGCTG
CCATGGGGGAGGATTACAAGGCTGACTGTCCTCCAGGGAACCCAGCACCTACCAGTAATCATGG
CCCAGATGCCGCAGAAGCTGAAGAGGATTTTGTGGACCCATGGACAGTACAGACGAGCAGTGCA
AAAGGCATAGACTATGATAAGCTCATTGTTCGGTTTGGAAGCAGTAAAATTGACAAAGAGCTAA
TAAACCGAATAGAGAGAGCCACCGGCCAAAGACCACACCGCTTCCTGCGCAGAGGCATCTTCTT
CTCACACAGAGACATGAATCAGGTTCTCGATGCCTATGAAAATAAGAAGCCGTTTTATCTGTAC
ACGGGCCGGGGCCCCTCTTCTGAAGCCATGCATGTGGGTCACCTCATTCCGTTTATTTTCACAA
AGTGGCTCCAGGATGTGTTTAACGTGCCCTTGGTCATCCAGATGACGGATGACGAGAAGTATCT
GTGGAAGGACCTGACCCTAGATCAGGCCTATGGCTATGCTGTGGAGAATGCCAAGGACATCATT
GCCTGTGGCTTTGACATCAACAAGACTTTCATATTCTCTGACCTGGACTACATGGGGATGAGCT
CAGGTTTCTACAAAAATGTGGTGAAGATTCAAAAGCATGTTACCTTCAACCAAGTGAAAGGCAT
TTTCGGCTTCACTGACAGCGACAGCATCGGGAAGATCAGTTTTCCTGCCATCCAGGCTGCTCCC
TCCTTCAGCAACTCATTCCCACAGATCTTCCAAGACAGGACAGATATCCAGTGCCTTATCCCAT
GTGCCATTGACCAGGATCCTTACTTTAGAATGACGAGGGACGTCGCCCCCAGGATCGGCTATCC
TAAACCAGCCCTGCTGCACTCCACCTTCTTCCCTGCCCTGCAGGGCGCTCAGACCAAAATGAGT
GCCAGCGACCCCAACTCCTCCATCTTCCTCACTGACACGGCAAAGCAGATCAAAACCAAGGTCA
ATAAGCATGCATTTTCTGGAGGGAGAGACACCATCGAGGAGCACAGGCAGTTTGGGGGCAACTG
TGATGTGGATGTGTCTTTCATGTACCTGACCTTCTTCCTCGAGGACGACGACAAGCTCGAGCAG
ATCAGGAAGGATTACACCAGCGGAGCCATGCTCACCGGTGAGCTCAAGAAGGTACTCATAGAGG
TTCTCCAGCCCTTGATCGCAGAGCACCAGGCCCGGCGCAAGGAGGTCACGGACGAGATAGCAAA
AGAGTTCATGACTCCCCGGGAGCTGTCCTTCGACTTTCAGTAGCACTCGTTTTACATATGCTTA
TAAAAGAAGTGATGTATCAATAATCCCAGCCCAGTCAAAGCACTGCCACCCGTAGGCTTCTGTC
TCATGATTATCATTGGGCCTGGTCTCTGTAAGCCTGTGTATGTTATCAGTACTGTTTCTTCCTG
TGAGTTCCATTATTTCTGTCTCTTATGGGCAAAGCATTGTGGGTGATCGGTGCTGGCTAACATT
GCATGGTCAGATAGAGAAGTCCAGCTGTGAGTCTCTCCCCAGAGCAGCCCCCAAAGAGTGGAGC
CTTTGGCTGGAAGTCCATGGACCACCCTGTTCTGGTCCGTGGAGGACTCCGAGGGTTCCAAGTA
TACTCTTAAGACCCACTCTGTTTAAAAATATATATTCTATGTGTGCATATATGGAATTGAAATG
TCATTATTGTAACCTAGAAAGTGCTTTCAAACATCGATGTGGGGAGGTTTATTGAGCACAAGTT
GTATTTCAGCCCACACCCCCTCCCAAAAGAAATTGGTAAGTAAAAGCTTTGCTCTACATTTGAC
TAAGAAATCACCCAGCTTTCAAGCTGCTTTTAACAATGAAGATTGAACAGAGTTGAGCAATTTT
GATTAATTGAGACTTAGGGGTGAAACTGTTCAGTTTACTGAACTCCAGACCATGCATGTATTCC
ACTCCAGAAATCAGCTCGCTTCCCTTGGCGTACCAGTATTCTCCCGCCAGATGACCCTAGACCC
TCTGTCCTGCAGAATCAGGGTGGCTTTTCCCCGACTGTGTCCGATGCCAAGGAGTCCTGGCCTT
TGCAGATGCTTCATGTTGATCCTTGGCTGCAGTGGAAGTCAGCACAGAGCAGTGCCCTGGCTGT
GTCCCTGGACGGGTGGACTTAGCTAGGGAGAAAGTCGAGGCAGCAGCCCTCGAGGCCCTCACAG
GTGTCTAGGCAGGCCTCATTTCATCACGCACCATGAGCAGGTCTGGAAGAGCAAAGCCCAATCT
CAGGGAAGCCCGTGGTTGATGTGTCTGGGTCTGCTCTGGAGCACTCTGCCCTCCTGTCGCCCAG
TAGAGTAAATAAACTTCCTTGGCTCCCGC

hide sequence

RefSeq Acc Id:

XM_037984508 ⟹ XP_037840436

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666053	65,437,092 - 65,479,358 (-)	NCBI

RefSeq Acc Id:

XM_037984509 ⟹ XP_037840437

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666053	65,437,092 - 65,479,028 (-)	NCBI

RefSeq Acc Id:

XM_037984510 ⟹ XP_037840438

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666053	65,437,092 - 65,479,360 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007986031	(Get FASTA)	NCBI Sequence Viewer
	XP_007986032	(Get FASTA)	NCBI Sequence Viewer
	XP_007986033	(Get FASTA)	NCBI Sequence Viewer
	XP_037840436	(Get FASTA)	NCBI Sequence Viewer
	XP_037840437	(Get FASTA)	NCBI Sequence Viewer
	XP_037840438	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000006574
	ENSCSAP00000006574.1

RefSeq Acc Id:	XP_007986033 ⟸ XM_007987842
- UniProtKB:	A0A0D9RD85 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007986032 ⟸ XM_007987841
- UniProtKB:	A0A0D9RD85 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007986031 ⟸ XM_007987840
- UniProtKB:	A0A0D9RD85 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000006574 ⟸ ENSCSAT00000008428

RefSeq Acc Id:	XP_037840438 ⟸ XM_037984510
- UniProtKB:	A0A0D9RD85 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037840436 ⟸ XM_037984508
- UniProtKB:	A0A0D9RD85 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037840437 ⟸ XM_037984509
- UniProtKB:	A0A0D9RD85 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010343	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008428.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.620	UniProtKB/TrEMBL
	S15/NS1, RNA-binding	UniProtKB/TrEMBL
	Tyrosyl-Transfer RNA Synthetase	UniProtKB/TrEMBL
InterPro	aa-tRNA-synth_I_CS	UniProtKB/TrEMBL
	aa-tRNA-synth_Ic	UniProtKB/TrEMBL
	Rossmann-like_a/b/a_fold	UniProtKB/TrEMBL
	S15_NS1_RNA-bd	UniProtKB/TrEMBL
	Trp-tRNA-ligase	UniProtKB/TrEMBL
	WHEP-TRS_dom	UniProtKB/TrEMBL
KEGG Report	csab:103229694	UniProtKB/TrEMBL
NCBI Gene	WARS1	ENTREZGENE
PANTHER	TRYPTOPHAN--TRNA LIGASE, CYTOPLASMIC	UniProtKB/TrEMBL
	TRYPTOPHANYL-TRNA SYNTHETASE	UniProtKB/TrEMBL
Pfam	tRNA-synt_1b	UniProtKB/TrEMBL
	WHEP-TRS	UniProtKB/TrEMBL
PRINTS	TRNASYNTHTRP	UniProtKB/TrEMBL
PROSITE	AA_TRNA_LIGASE_I	UniProtKB/TrEMBL
	WHEP_TRS_1	UniProtKB/TrEMBL
	WHEP_TRS_2	UniProtKB/TrEMBL
SMART	WHEP-TRS	UniProtKB/TrEMBL
Superfamily-SCOP	Nucleotidylyl transferase	UniProtKB/TrEMBL
	SSF47060	UniProtKB/TrEMBL
UniProt	A0A0D9RD85	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

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Imported Disease Annotations - OMIM

Imported Annotations - SMPDB