WARS1 (tryptophanyl-tRNA synthetase 1) - Rat Genome Database

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Gene: WARS1 (tryptophanyl-tRNA synthetase 1) Canis lupus familiaris
Analyze
Symbol: WARS1
Name: tryptophanyl-tRNA synthetase 1
RGD ID: 12323498
Description: ENCODES a protein that exhibits aminoacyl-tRNA ligase activity (inferred); ATP binding (inferred); kinase inhibitor activity (inferred); INVOLVED IN positive regulation of gene expression (inferred); positive regulation of protein-containing complex assembly (inferred); regulation of angiogenesis (inferred); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: tryptophan--tRNA ligase, cytoplasmic; tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase, cytoplasmic; WARS
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1868,610,105 - 68,644,616 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl868,610,090 - 68,643,467 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl868,893,953 - 68,928,235 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
WARS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1868,610,105 - 68,644,616 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl868,610,090 - 68,643,467 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl868,893,953 - 68,928,235 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBIUU_Cfam_GSD_1.0
WARS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814100,333,790 - 100,376,327 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl14100,333,790 - 100,376,805 (-)EnsemblGRCh38hg38GRCh38
GRCh3714100,800,127 - 100,842,664 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361499,869,878 - 99,912,433 (-)NCBINCBI36Build 36hg18NCBI36
Build 341499,869,877 - 99,911,680NCBI
Celera1480,854,751 - 80,897,310 (-)NCBICelera
Cytogenetic Map14q32.2NCBI
HuRef1480,981,470 - 81,024,059 (-)NCBIHuRef
CHM1_114100,737,895 - 100,780,446 (-)NCBICHM1_1
T2T-CHM13v2.01494,566,811 - 94,609,425 (-)NCBIT2T-CHM13v2.0
Wars1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912108,825,956 - 108,860,095 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12108,825,956 - 108,860,100 (-)EnsemblGRCm39 Ensembl
GRCm3812108,860,030 - 108,894,175 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12108,860,030 - 108,894,174 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712110,098,240 - 110,132,384 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612109,307,841 - 109,341,004 (-)NCBIMGSCv36mm8
Celera12110,098,849 - 110,127,409 (-)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1259.66NCBI
Wars1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86133,540,463 - 133,571,645 (-)NCBIGRCr8
mRatBN7.26127,776,088 - 127,807,273 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6127,776,090 - 127,807,269 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6127,899,086 - 127,930,096 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06128,194,132 - 128,225,140 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06127,553,503 - 127,584,499 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06132,771,026 - 132,802,262 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6132,771,021 - 132,802,210 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06141,941,102 - 141,972,312 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46133,200,866 - 133,232,048 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16133,207,052 - 133,238,235 (-)NCBI
Celera6125,326,985 - 125,358,157 (-)NCBICelera
Cytogenetic Map6q32NCBI
Wars1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543821,414,815 - 21,445,042 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543821,414,878 - 21,445,417 (-)NCBIChiLan1.0ChiLan1.0
WARS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v215101,485,389 - 101,526,405 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114100,701,881 - 100,742,894 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01480,954,852 - 80,996,316 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.114100,268,845 - 100,310,662 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl14100,268,845 - 100,310,662 (-)Ensemblpanpan1.1panPan2
Wars1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086406,065,559 - 6,097,465 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366043,984,872 - 4,016,911 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366043,985,002 - 4,016,870 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WARS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7121,212,981 - 121,238,113 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17121,212,981 - 121,238,144 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27128,677,569 - 128,702,996 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WARS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12478,296,154 - 78,340,683 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2478,295,741 - 78,339,732 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605365,436,415 - 65,479,619 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wars1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247343,782,733 - 3,817,852 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247343,777,866 - 3,815,369 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in WARS1
547 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 17 1 6 1 6 6 12 8 10 6
Low 5 5 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022422378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_537554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002629508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005398235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000028424   ⟹   ENSCAFP00000026434
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl868,610,090 - 68,643,467 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845007751   ⟹   ENSCAFP00845006138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl868,893,953 - 68,928,221 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845007758   ⟹   ENSCAFP00845006142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl868,893,955 - 68,928,235 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845007763   ⟹   ENSCAFP00845006146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl868,894,205 - 68,928,232 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845007783   ⟹   ENSCAFP00845006165
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl868,921,751 - 68,922,589 (-)Ensembl
RefSeq Acc Id: XM_038484209   ⟹   XP_038340137
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBI
RefSeq Acc Id: XM_038484210   ⟹   XP_038340138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1868,555,815 - 68,589,543 (-)NCBI
RefSeq Acc Id: XM_038484211   ⟹   XP_038340139
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBI
RefSeq Acc Id: XM_038484212   ⟹   XP_038340140
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBI
RefSeq Acc Id: XM_038484213   ⟹   XP_038340141
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBI
RefSeq Acc Id: XM_038545724   ⟹   XP_038401652
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBI
RefSeq Acc Id: XM_038545725   ⟹   XP_038401653
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0869,019,419 - 69,053,141 (-)NCBI
RefSeq Acc Id: XM_038545726   ⟹   XP_038401654
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBI
RefSeq Acc Id: XM_038545727   ⟹   XP_038401655
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBI
RefSeq Acc Id: XM_038545728   ⟹   XP_038401656
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBI
RefSeq Acc Id: XM_038595660   ⟹   XP_038451588
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBI
RefSeq Acc Id: XM_038595666   ⟹   XP_038451594
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha868,128,827 - 68,162,517 (-)NCBI
RefSeq Acc Id: XM_038595672   ⟹   XP_038451600
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBI
RefSeq Acc Id: XM_038595680   ⟹   XP_038451608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBI
RefSeq Acc Id: XM_038609816   ⟹   XP_038465744
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBI
RefSeq Acc Id: XM_038609817   ⟹   XP_038465745
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0868,621,956 - 68,655,685 (-)NCBI
RefSeq Acc Id: XM_038609818   ⟹   XP_038465746
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBI
RefSeq Acc Id: XM_038609819   ⟹   XP_038465747
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBI
RefSeq Acc Id: XM_038609820   ⟹   XP_038465748
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBI
RefSeq Acc Id: XM_038674639   ⟹   XP_038530567
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBI
RefSeq Acc Id: XM_038674640   ⟹   XP_038530568
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0868,893,954 - 68,927,857 (-)NCBI
RefSeq Acc Id: XM_038674641   ⟹   XP_038530569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBI
RefSeq Acc Id: XM_038674642   ⟹   XP_038530570
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBI
RefSeq Acc Id: XM_038674643   ⟹   XP_038530571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBI
RefSeq Acc Id: XM_537554   ⟹   XP_537554
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1868,610,105 - 68,644,616 (-)NCBI
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002629508
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1868,610,105 - 68,644,616 (-)NCBI
Dog10K_Boxer_Tasha868,128,827 - 68,162,983 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005329969
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1868,555,815 - 68,590,006 (-)NCBI
RefSeq Acc Id: XR_005363785
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0869,019,419 - 69,053,607 (-)NCBI
RefSeq Acc Id: XR_005398235
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0868,621,956 - 68,656,146 (-)NCBI
RefSeq Acc Id: XR_005431497
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0868,893,954 - 68,928,323 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038340137 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340138 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340139 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340140 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340141 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401652 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401653 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401654 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401655 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401656 (Get FASTA)   NCBI Sequence Viewer  
  XP_038451588 (Get FASTA)   NCBI Sequence Viewer  
  XP_038451594 (Get FASTA)   NCBI Sequence Viewer  
  XP_038451600 (Get FASTA)   NCBI Sequence Viewer  
  XP_038451608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465744 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465745 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465746 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465747 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465748 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530568 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530569 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530570 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530571 (Get FASTA)   NCBI Sequence Viewer  
  XP_537554 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000026434.4
  ENSCAFP00000067521.1
  ENSCAFP00000067686.1
  ENSCAFP00000071869.1
  ENSCAFP00030010090.1
  ENSCAFP00030010149.1
  ENSCAFP00040001961.1
  ENSCAFP00040001981.1
  ENSCAFP00845006138.1
  ENSCAFP00845006142
  ENSCAFP00845006142.1
  ENSCAFP00845006146
  ENSCAFP00845006146.1
  ENSCAFP00845006165.1
Reference Protein Sequences
RefSeq Acc Id: XP_537554   ⟸   XM_537554
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MLF5 (UniProtKB/TrEMBL),   A0A8I3MMH0 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000026434   ⟸   ENSCAFT00000028424
RefSeq Acc Id: XP_038340137   ⟸   XM_038484209
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038340141   ⟸   XM_038484213
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038340140   ⟸   XM_038484212
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038340139   ⟸   XM_038484211
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038340138   ⟸   XM_038484210
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465744   ⟸   XM_038609816
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465748   ⟸   XM_038609820
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038465747   ⟸   XM_038609819
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465746   ⟸   XM_038609818
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465745   ⟸   XM_038609817
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038530567   ⟸   XM_038674639
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530571   ⟸   XM_038674643
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MLF5 (UniProtKB/TrEMBL),   A0A8I3MMH0 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530570   ⟸   XM_038674642
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530569   ⟸   XM_038674641
- Peptide Label: isoform X1
- UniProtKB: A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530568   ⟸   XM_038674640
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038451588   ⟸   XM_038595660
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038451608   ⟸   XM_038595680
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038451600   ⟸   XM_038595672
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038451594   ⟸   XM_038595666
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401652   ⟸   XM_038545724
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401656   ⟸   XM_038545728
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MLF5 (UniProtKB/TrEMBL),   A0A8I3MMH0 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401655   ⟸   XM_038545727
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401654   ⟸   XM_038545726
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401653   ⟸   XM_038545725
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MJL8 (UniProtKB/TrEMBL),   A0A8C0QYX2 (UniProtKB/TrEMBL),   A0A8I3MTD7 (UniProtKB/TrEMBL),   A0A8I3RTG1 (UniProtKB/TrEMBL),   A0A8P0TQD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845006146   ⟸   ENSCAFT00845007763
RefSeq Acc Id: ENSCAFP00845006138   ⟸   ENSCAFT00845007751
RefSeq Acc Id: ENSCAFP00845006165   ⟸   ENSCAFT00845007783
RefSeq Acc Id: ENSCAFP00845006142   ⟸   ENSCAFT00845007758
Protein Domains
WHEP-TRS

Promoters
RGD ID:13684341
Promoter ID:EPDNEW_C2407
Type:single initiation site
Name:WARS_2
Description:tryptophanyl-tRNA synthetase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_C2408  
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1868,643,480 - 68,643,540EPDNEW
RGD ID:13684340
Promoter ID:EPDNEW_C2408
Type:multiple initiation site
Name:WARS_1
Description:tryptophanyl-tRNA synthetase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_C2407  
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1868,643,635 - 68,643,695EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017906 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030006264 UniProtKB/TrEMBL
  ENSCAFG00040001236 UniProtKB/TrEMBL
  ENSCAFG00845004302 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000028424.5 UniProtKB/TrEMBL
  ENSCAFT00000106712.1 UniProtKB/TrEMBL
  ENSCAFT00000107587.1 UniProtKB/TrEMBL
  ENSCAFT00000107688.1 UniProtKB/TrEMBL
  ENSCAFT00030011532.1 UniProtKB/TrEMBL
  ENSCAFT00030011593.1 UniProtKB/TrEMBL
  ENSCAFT00040002300.1 UniProtKB/TrEMBL
  ENSCAFT00040002320.1 UniProtKB/TrEMBL
  ENSCAFT00845007751.1 UniProtKB/TrEMBL
  ENSCAFT00845007758 ENTREZGENE
  ENSCAFT00845007758.1 UniProtKB/TrEMBL
  ENSCAFT00845007763 ENTREZGENE
  ENSCAFT00845007763.1 UniProtKB/TrEMBL
  ENSCAFT00845007783.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.620 UniProtKB/TrEMBL
  S15/NS1, RNA-binding UniProtKB/TrEMBL
  Tyrosyl-Transfer RNA Synthetase UniProtKB/TrEMBL
InterPro aa-tRNA-synth_I_CS UniProtKB/TrEMBL
  aa-tRNA-synth_Ic UniProtKB/TrEMBL
  Rossmann-like_a/b/a_fold UniProtKB/TrEMBL
  S15_NS1_RNA-bd UniProtKB/TrEMBL
  Trp-tRNA-ligase UniProtKB/TrEMBL
  WHEP-TRS_dom UniProtKB/TrEMBL
NCBI Gene WARS ENTREZGENE
PANTHER TRYPTOPHAN--TRNA LIGASE, CYTOPLASMIC UniProtKB/TrEMBL
  TRYPTOPHANYL-TRNA SYNTHETASE UniProtKB/TrEMBL
Pfam tRNA-synt_1b UniProtKB/TrEMBL
  WHEP-TRS UniProtKB/TrEMBL
PRINTS TRNASYNTHTRP UniProtKB/TrEMBL
PROSITE AA_TRNA_LIGASE_I UniProtKB/TrEMBL
  WHEP_TRS_1 UniProtKB/TrEMBL
  WHEP_TRS_2 UniProtKB/TrEMBL
SMART WHEP-TRS UniProtKB/TrEMBL
Superfamily-SCOP Nucleotidylyl transferase UniProtKB/TrEMBL
  SSF47060 UniProtKB/TrEMBL
UniProt A0A8C0MJL8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MLF5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QYX2 ENTREZGENE
  A0A8I3MMH0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MTD7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MUH5_CANLF UniProtKB/TrEMBL
  A0A8I3RTG1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PGC4_CANLF UniProtKB/TrEMBL
  A0A8P0TQD4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:48331 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-06 WARS1  tryptophanyl-tRNA synthetase 1  WARS  tryptophanyl-tRNA synthetase  Symbol and/or name change 5135510 APPROVED