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Gene: SPOP (speckle type BTB/POZ protein) Chlorocebus sabaeus

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Symbol:

SPOP

Name:

speckle type BTB/POZ protein

RGD ID:

18447692

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-binding transcription factor activity (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); Ductal Carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear speck (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC103243644; speckle-type POZ protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	69,990,554 - 70,073,241 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666077	41,098,933 - 41,182,120 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

colorectal cancer (ISO)

Ductal Carcinoma (ISO)

Endometrial Neoplasms (ISO)

genetic disease (ISO)

hepatoblastoma (ISO)

hepatocellular carcinoma (ISO)

hereditary breast ovarian cancer syndrome (ISO)

lung adenocarcinoma (ISO)

lung non-small cell carcinoma (ISO)

Nabais Sa-de Vries Syndrome, Type 1 (ISO)

Nabais Sa-de Vries Syndrome, Type 2 (ISO)

prostate adenocarcinoma (ISO)

prostate cancer (ISO)

Prostatic Neoplasms (ISO)

stomach cancer (ISO)

trichodontoosseous syndrome (ISO)

uterine cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glucose homeostasis (ISO)

intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ISO)

negative regulation of DNA-binding transcription factor activity (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ISO)

positive regulation of type B pancreatic cell apoptotic process (ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (ISO)

protein polyubiquitination (ISO)

type B pancreatic cell apoptotic process (ISO)

ubiquitin-dependent protein catabolic process (ISO)

Cellular Component

Cul3-RING ubiquitin ligase complex (ISO)

nuclear speck (ISO)

nucleus (ISO)

Molecular Function

identical protein binding (ISO)

molecular function inhibitor activity (ISO)

protein binding (ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (ISO)

ubiquitin protein ligase binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Hedgehog signaling pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SPOP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	69,990,554 - 70,073,241 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666077	41,098,933 - 41,182,120 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SPOP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	49,598,884 - 49,678,163 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	49,598,884 - 49,678,163 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	47,676,246 - 47,755,525 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	45,031,245 - 45,110,524 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	45,031,246 - 45,110,524	NCBI
Celera	17	44,131,243 - 44,210,519 (-)	NCBI		Celera
Cytogenetic Map	17	q21.33	NCBI
HuRef	17	43,041,208 - 43,120,660 (-)	NCBI		HuRef
CHM1_1	17	47,741,302 - 47,820,599 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	50,462,011 - 50,541,274 (-)	NCBI		T2T-CHM13v2.0

Spop
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	95,304,909 - 95,384,236 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	95,304,906 - 95,384,232 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	95,414,083 - 95,493,410 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	95,414,080 - 95,493,406 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	95,275,397 - 95,354,724 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	95,230,204 - 95,309,103 (+)	NCBI		MGSCv36	mm8
Celera	11	105,038,004 - 105,132,151 (+)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	59.01	NCBI

Spop
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	80,854,890 - 80,935,781 (+)	NCBI		GRCr8
mRatBN7.2	10	80,358,121 - 80,438,983 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	80,358,124 - 80,483,955 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	85,306,751 - 85,387,911 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	84,804,797 - 84,885,956 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	80,196,824 - 80,277,774 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	83,231,187 - 83,311,987 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	83,231,238 - 83,311,592 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	83,040,592 - 83,121,901 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	84,099,990 - 84,185,130 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	84,102,831 - 84,199,894 (+)	NCBI
Celera	10	79,129,126 - 79,210,141 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

Spop
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	11,897,592 - 11,970,269 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	11,897,642 - 11,970,269 (+)	NCBI	ChiLan1.0	ChiLan1.0

SPOP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	65,784,045 - 65,863,127 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	70,590,547 - 70,669,645 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	43,685,913 - 43,765,277 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	48,417,634 - 48,495,725 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	48,417,634 - 48,440,623 (-)	Ensembl	panpan1.1		panPan2

SPOP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	25,685,723 - 25,752,953 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	25,686,439 - 25,752,900 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	25,143,931 - 25,211,377 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	26,480,666 - 26,548,198 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	26,480,865 - 26,548,177 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	25,248,665 - 25,316,107 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	25,507,666 - 25,575,090 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	25,636,940 - 25,704,391 (-)	NCBI		UU_Cfam_GSD_1.0

Spop
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	25,105,808 - 25,180,727 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	11,894,406 - 11,970,155 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	11,894,449 - 11,969,730 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPOP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	25,792,630 - 25,860,595 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	25,792,621 - 25,860,630 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	25,770,383 - 25,777,618 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Spop
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624795	5,698,131 - 5,769,209 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008013065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008013068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_008013065 ⟹ XP_008011256

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	69,990,554 - 70,073,241 (-)	NCBI
Vero_WHO_p1.0	NW_023666077	41,098,933 - 41,182,006 (-)	NCBI

Sequence:

show sequence

GGAGGCCGCGCGGGGTGGGGCCCGGCGGTACGCGCTGGCTGCGTCGACGTGCTGACGCCATGAC
GCCCCGGCCGGTGTGTGTCGGTGTGTGTGTGTGTGTGAGTGTGCGCGCTCCGAGTGTGTGTGTA
TTTGTGTATCGGCGGTCCCGCAGGTCCCGGATGTTGCGGACAGTATGAGGCGAGCGCAGGGGGA
CGGGGACCAGCAGCTGTCGCCGCCGCTCTCAGGGTGAAGAGGGAACAGAAATCTTTGCTCCCTG
ACTTTGGAAATCTCGTTTAACCTTCAAACTGGCGATGTCAAGGGTTCCAAGTCCTCCACCTCCG
GCAGAAATGTCGAGTGGCCCCGTAGCTGAGAGTTGGTGCTACACACAGATCAAGGTAGTAAAAT
TCTCCTACATGTGGACCATCAATAACTTTAGCTTTTGCCGGGAGGAAATGGGTGAAGTCATTAA
AAGTTCTACCTTTTCATCAGGAGCCAATGATAAACTGAAATGGTGTTTGCGAGTAAACCCCAAA
GGGCTAGATGAAGAAAGCAAAGATTACCTGTCACTTTACCTGTTACTGGTCAGCTGTCCAAAGA
GTGAAGTTCGGGCAAAATTCAAATTCTCCATCCTGAATGCCAAGGGAGAAGAAACCAAAGCTAT
GGAGAGTCAACGGGCATATAGGTTTGTGCAAGGCAAAGACTGGGGATTCAAGAAATTCATCCGT
AGAGATTTTCTTTTGGATGAGGCCAACGGGCTTCTCCCTGATGACAAGCTTACCCTCTTCTGCG
AGGTGAGTGTTGTGCAAGATTCTGTCAACATTTCTGGCCAGAATACCATGAACATGGTAAAGGT
TCCTGAGTGCCGGTTGGCAGATGAGTTAGGAGGACTGTGGGAGAATTCCCGGTTCACAGACTGC
TGCTTATGTGTTGCTGGCCAGGAATTCCAGGCTCACAAAGCTATCTTAGCAGCTCGTTCTCCGG
TTTTTAGTGCCATGTTTGAACATGAAATGGAAGAGAGCAAAAAGAATCGAGTTGAAATCAATGA
TGTGGAGCCTGAAGTTTTTAAGGAAATGATGTGCTTCATATACACGGGGAAGGCTCCAAACCTC
GACAAAATGGCTGATGATTTGTTGGCAGCTGCTGACAAGTATGCCCTGGAGCGTTTAAAGGTCA
TGTGTGAGGATGCCCTCTGCAGTAACCTGTCCGTGGAGAATGCTGCAGAAATTCTCATCCTGGC
TGACCTCCACAGCGCAGATCAGTTGAAAACTCAGGCGGTGGATTTCATCAACTATCATGCTTCG
GATGTCTTGGAGACCTCTGGGTGGAAGTCAATGGTGGTGTCACATCCCCACTTGGTGGCTGAGG
CATACCGCTCTCTGGCTTCAGCACAGTGCCCTTTTCTGGGACCCCCACGCAAACGCCTGAAGCA
ATCCTAAGATCCTGCTTGTTGTAAGACTCCGTTTAATTTCCAGAAGCAGCAGCCACTGTTGCTG
CCACTGACCACCAGGTAGACAGCGCAATCTGTGGAGCTTTTACTCTGTTGTGAGGGGAAGAGAC
TGCATTGTGGCCCCAGACTTTTAAAACAGCACTAAATAACTTGGGGGAAACGGGGGGAGGGAAG
GGCCCAGGACTCGGGGCTGTTCAACCTAATGAAAACCCTGTTGCTGCGTCACTGTGTTCCCTTT
GGCCTGGCCGAGTTTGATACTGTGGGGATTCAGTTTAGGCGCTGGCCCGAGGACATCCCAGCGG
TGGTACTTCGGAGAAACCTGTCTGCATCTGACTGAGCAGAATAAATCGTCAGGTGCCTGGAGCA
AAAAGGAAAAAAAAAAGAAAGGACATTGTGTTTTAACAGAAGGGAAAAGGAAAGAAGAAAAGAT
TTTTGCAGAATTTCTCAAAAATCAGTTTGCGGATTCCAGTAGTATTTATATTGAGAGAAACAAA
TTTTAGTCCTTCCAACTGTGCTAAAACTTGGATATTTGTGAAAACTCACCACCATACAAGCATC
AGAAGAGCTCTCTTGTTGTTAGCACTTACTGTTTGCAAGAACAGAATGCATCCTTTTATCCTTT
TATGAAAAATGACAAGTGAAGGCAAAAGGGGAAGGTTATTTGATCTGGAAGATGAGTGTTCTGA
TGTGGTGGCTTTTGCAAAAATCTTTATTGGTGTTGAAAACTGGAAAAAAATAACTCATCCAGAA
TTCATACTGTCTTGACAAGAACTATGGTTCTCTGTTTTTAGATATTGTGGAAAATGTTTTTGGG
CATTTTTCTCTGATTTTATTTCTTCTCCCCCGCCCCTTTTTCTAAAAAACAAACAAACAAAAAA
ACACACAAAACAAAAACAGAACAAAAGAAGAGAAGAGAGAAGGAAATTTTATTAATTAAAGATG
CTGTGTGATAAAATCCCAGCCCAGATTGCTCAGCTGTTTGTACCTGACTTGCCGCCTGCATAGG
AGCCAGTTCTGTTCCTTCTGACTAGCCCCTCTTCCTCCAGGGGAGAACTTCCAAATGTTAATTT
TTTCTTTTTGAAAATATAAATAATTACTATTTTGTACTGTGTGGTATCTCTGGTCTTTTGTTTC
ACTCACCTGCCTTGTCTCTTGGGTCTGAGTCCCTTGCTTAAGGGATTTTGAAGTCCTAGTTTTT
AGCTTGCAGAGATTATGTTTGAAATGTCTAATGAGCCGTAGGGATTTGTTGAGACTCCGTAATT
TCAAGTTTTCTTTGTGAGCTATCAGCATCTGCCAGTCTCTTGTCCTCCCTGAGTATCTCACAGT
CCATATCCTGATGAGGGATCAGGCCCCTACCTGTGCCAAGGCAAGTAATGGTAGTGGGCTTTTC
TGCACCCTGTATGTTTTAAGACCTAATCCCCACCTCCCTTCTCCTAATTAAATACAAAAAGATC
CAGGGGACATAAATGTGGAGATTAAATAAAGGGAAATTATTGTCTCTAA

hide sequence

RefSeq Acc Id:

XM_008013067 ⟹ XP_008011258

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	69,990,554 - 70,073,214 (-)	NCBI
Vero_WHO_p1.0	NW_023666077	41,099,327 - 41,182,120 (-)	NCBI

Sequence:

show sequence

GTACGCGCTGGCTGCGTCGACGTGCTGACGCCATGACGCCCCGGCCGGTGTGTGTCGGTGTGTG
TGTGTGTGTGAGTGTGCGCGCTCCGAGTGTGTGTGTATTTGTGTATCGGCGGTCCCGCAGGTCC
CGGATGTTGCGGACAGTATGAGGCGAGCGCAGGGGGACGGGGACCAGCAGCTGTCGCCGCCGCT
CTCAGGTATTGACACGAGACAAGTCACTTCATTTTTGCTGCACTCATAGAGATTTCCTGTTAGA
CAAGACAAATTAGAGTTTTCCTACTGACTTAACTTGGGTGAAGAGGGAACAGAAATCTTTGCTC
CCTGACTTTGGAAATCTCGTTTAACCTTCAAACTGGCGATGTCAAGGGTTCCAAGTCCTCCACC
TCCGGCAGAAATGTCGAGTGGCCCCGTAGCTGAGAGTTGGTGCTACACACAGATCAAGGTAGTA
AAATTCTCCTACATGTGGACCATCAATAACTTTAGCTTTTGCCGGGAGGAAATGGGTGAAGTCA
TTAAAAGTTCTACCTTTTCATCAGGAGCCAATGATAAACTGAAATGGTGTTTGCGAGTAAACCC
CAAAGGGCTAGATGAAGAAAGCAAAGATTACCTGTCACTTTACCTGTTACTGGTCAGCTGTCCA
AAGAGTGAAGTTCGGGCAAAATTCAAATTCTCCATCCTGAATGCCAAGGGAGAAGAAACCAAAG
CTATGGAGAGTCAACGGGCATATAGGTTTGTGCAAGGCAAAGACTGGGGATTCAAGAAATTCAT
CCGTAGAGATTTTCTTTTGGATGAGGCCAACGGGCTTCTCCCTGATGACAAGCTTACCCTCTTC
TGCGAGGTGAGTGTTGTGCAAGATTCTGTCAACATTTCTGGCCAGAATACCATGAACATGGTAA
AGGTTCCTGAGTGCCGGTTGGCAGATGAGTTAGGAGGACTGTGGGAGAATTCCCGGTTCACAGA
CTGCTGCTTATGTGTTGCTGGCCAGGAATTCCAGGCTCACAAAGCTATCTTAGCAGCTCGTTCT
CCGGTTTTTAGTGCCATGTTTGAACATGAAATGGAAGAGAGCAAAAAGAATCGAGTTGAAATCA
ATGATGTGGAGCCTGAAGTTTTTAAGGAAATGATGTGCTTCATATACACGGGGAAGGCTCCAAA
CCTCGACAAAATGGCTGATGATTTGTTGGCAGCTGCTGACAAGTATGCCCTGGAGCGTTTAAAG
GTCATGTGTGAGGATGCCCTCTGCAGTAACCTGTCCGTGGAGAATGCTGCAGAAATTCTCATCC
TGGCTGACCTCCACAGCGCAGATCAGTTGAAAACTCAGGCGGTGGATTTCATCAACTATCATGC
TTCGGATGTCTTGGAGACCTCTGGGTGGAAGTCAATGGTGGTGTCACATCCCCACTTGGTGGCT
GAGGCATACCGCTCTCTGGCTTCAGCACAGTGCCCTTTTCTGGGACCCCCACGCAAACGCCTGA
AGCAATCCTAAGATCCTGCTTGTTGTAAGACTCCGTTTAATTTCCAGAAGCAGCAGCCACTGTT
GCTGCCACTGACCACCAGGTAGACAGCGCAATCTGTGGAGCTTTTACTCTGTTGTGAGGGGAAG
AGACTGCATTGTGGCCCCAGACTTTTAAAACAGCACTAAATAACTTGGGGGAAACGGGGGGAGG
GAAGGGCCCAGGACTCGGGGCTGTTCAACCTAATGAAAACCCTGTTGCTGCGTCACTGTGTTCC
CTTTGGCCTGGCCGAGTTTGATACTGTGGGGATTCAGTTTAGGCGCTGGCCCGAGGACATCCCA
GCGGTGGTACTTCGGAGAAACCTGTCTGCATCTGACTGAGCAGAATAAATCGTCAGGTGCCTGG
AGCAAAAAGGAAAAAAAAAAGAAAGGACATTGTGTTTTAACAGAAGGGAAAAGGAAAGAAGAAA
AGATTTTTGCAGAATTTCTCAAAAATCAGTTTGCGGATTCCAGTAGTATTTATATTGAGAGAAA
CAAATTTTAGTCCTTCCAACTGTGCTAAAACTTGGATATTTGTGAAAACTCACCACCATACAAG
CATCAGAAGAGCTCTCTTGTTGTTAGCACTTACTGTTTGCAAGAACAGAATGCATCCTTTTATC
CTTTTATGAAAAATGACAAGTGAAGGCAAAAGGGGAAGGTTATTTGATCTGGAAGATGAGTGTT
CTGATGTGGTGGCTTTTGCAAAAATCTTTATTGGTGTTGAAAACTGGAAAAAAATAACTCATCC
AGAATTCATACTGTCTTGACAAGAACTATGGTTCTCTGTTTTTAGATATTGTGGAAAATGTTTT
TGGGCATTTTTCTCTGATTTTATTTCTTCTCCCCCGCCCCTTTTTCTAAAAAACAAACAAACAA
AAAAACACACAAAACAAAAACAGAACAAAAGAAGAGAAGAGAGAAGGAAATTTTATTAATTAAA
GATGCTGTGTGATAAAATCCCAGCCCAGATTGCTCAGCTGTTTGTACCTGACTTGCCGCCTGCA
TAGGAGCCAGTTCTGTTCCTTCTGACTAGCCCCTCTTCCTCCAGGGGAGAACTTCCAAATGTTA
ATTTTTTCTTTTTGAAAATATAAATAATTACTATTTTGTACTGTGTGGTATCTCTGGTCTTTTG
TTTCACTCACCTGCCTTGTCTCTTGGGTCTGAGTCCCTTGCTTAAGGGATTTTGAAGTCCTAGT
TTTTAGCTTGCAGAGATTATGTTTGAAATGTCTAATGAGCCGTAGGGATTTGTTGAGACTCCGT
AATTTCAAGTTTTCTTTGTGAGCTATCAGCATCTGCCAGTCTCTTGTCCTCCCTGAGTATCTCA
CAGTCCATATCCTGATGAGGGATCAGGCCCCTACCTGTGCCAAGGCAAGTAATGGTAGTGGGCT
TTTCTGCACCCTGTATGTTTTAAGACCTAATCCCCACCTCCCTTCTCCTAATTAAATACAAAAA
GATCCAGGGGACATAAATGTGGAGATTAAATAAAGGGAAATTATTGTCTCTAA

hide sequence

RefSeq Acc Id:

XM_008013068 ⟹ XP_008011259

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	69,990,554 - 70,073,241 (-)	NCBI
Vero_WHO_p1.0	NW_023666077	41,099,326 - 41,182,072 (-)	NCBI

Sequence:

show sequence

GGAGGCCGCGCGGGGTGGGGCCCGGCGGTACGCGCTGGCTGCGTCGACGTGCTGACGCCATGAC
GCCCCGGCCGGTGTGTGTCGGTGTGTGTGTGTGTGTGAGTGTGCGCGCTCCGAGTGTGTGTGTA
TTTGTGTATCGGCGGTCCCGCAGGTCCCGGATGTTGCGGACAGTATGAGGCGAGCGCAGGGGGA
CGGGGACCAGCAGCTGTCGCCGCCGCTCTCAGAGATTTCCTGTTAGACAAGACAAATTAGAGTT
TTCCTACTGACTTAACTTGGGTGAAGAGGGAACAGAAATCTTTGCTCCCTGACTTTGGAAATCT
CGTTTAACCTTCAAACTGGCGATGTCAAGGGTTCCAAGTCCTCCACCTCCGGCAGAAATGTCGA
GTGGCCCCGTAGCTGAGAGTTGGTGCTACACACAGATCAAGGTAGTAAAATTCTCCTACATGTG
GACCATCAATAACTTTAGCTTTTGCCGGGAGGAAATGGGTGAAGTCATTAAAAGTTCTACCTTT
TCATCAGGAGCCAATGATAAACTGAAATGGTGTTTGCGAGTAAACCCCAAAGGGCTAGATGAAG
AAAGCAAAGATTACCTGTCACTTTACCTGTTACTGGTCAGCTGTCCAAAGAGTGAAGTTCGGGC
AAAATTCAAATTCTCCATCCTGAATGCCAAGGGAGAAGAAACCAAAGCTATGGAGAGTCAACGG
GCATATAGGTTTGTGCAAGGCAAAGACTGGGGATTCAAGAAATTCATCCGTAGAGATTTTCTTT
TGGATGAGGCCAACGGGCTTCTCCCTGATGACAAGCTTACCCTCTTCTGCGAGGTGAGTGTTGT
GCAAGATTCTGTCAACATTTCTGGCCAGAATACCATGAACATGGTAAAGGTTCCTGAGTGCCGG
TTGGCAGATGAGTTAGGAGGACTGTGGGAGAATTCCCGGTTCACAGACTGCTGCTTATGTGTTG
CTGGCCAGGAATTCCAGGCTCACAAAGCTATCTTAGCAGCTCGTTCTCCGGTTTTTAGTGCCAT
GTTTGAACATGAAATGGAAGAGAGCAAAAAGAATCGAGTTGAAATCAATGATGTGGAGCCTGAA
GTTTTTAAGGAAATGATGTGCTTCATATACACGGGGAAGGCTCCAAACCTCGACAAAATGGCTG
ATGATTTGTTGGCAGCTGCTGACAAGTATGCCCTGGAGCGTTTAAAGGTCATGTGTGAGGATGC
CCTCTGCAGTAACCTGTCCGTGGAGAATGCTGCAGAAATTCTCATCCTGGCTGACCTCCACAGC
GCAGATCAGTTGAAAACTCAGGCGGTGGATTTCATCAACTATCATGCTTCGGATGTCTTGGAGA
CCTCTGGGTGGAAGTCAATGGTGGTGTCACATCCCCACTTGGTGGCTGAGGCATACCGCTCTCT
GGCTTCAGCACAGTGCCCTTTTCTGGGACCCCCACGCAAACGCCTGAAGCAATCCTAAGATCCT
GCTTGTTGTAAGACTCCGTTTAATTTCCAGAAGCAGCAGCCACTGTTGCTGCCACTGACCACCA
GGTAGACAGCGCAATCTGTGGAGCTTTTACTCTGTTGTGAGGGGAAGAGACTGCATTGTGGCCC
CAGACTTTTAAAACAGCACTAAATAACTTGGGGGAAACGGGGGGAGGGAAGGGCCCAGGACTCG
GGGCTGTTCAACCTAATGAAAACCCTGTTGCTGCGTCACTGTGTTCCCTTTGGCCTGGCCGAGT
TTGATACTGTGGGGATTCAGTTTAGGCGCTGGCCCGAGGACATCCCAGCGGTGGTACTTCGGAG
AAACCTGTCTGCATCTGACTGAGCAGAATAAATCGTCAGGTGCCTGGAGCAAAAAGGAAAAAAA
AAAGAAAGGACATTGTGTTTTAACAGAAGGGAAAAGGAAAGAAGAAAAGATTTTTGCAGAATTT
CTCAAAAATCAGTTTGCGGATTCCAGTAGTATTTATATTGAGAGAAACAAATTTTAGTCCTTCC
AACTGTGCTAAAACTTGGATATTTGTGAAAACTCACCACCATACAAGCATCAGAAGAGCTCTCT
TGTTGTTAGCACTTACTGTTTGCAAGAACAGAATGCATCCTTTTATCCTTTTATGAAAAATGAC
AAGTGAAGGCAAAAGGGGAAGGTTATTTGATCTGGAAGATGAGTGTTCTGATGTGGTGGCTTTT
GCAAAAATCTTTATTGGTGTTGAAAACTGGAAAAAAATAACTCATCCAGAATTCATACTGTCTT
GACAAGAACTATGGTTCTCTGTTTTTAGATATTGTGGAAAATGTTTTTGGGCATTTTTCTCTGA
TTTTATTTCTTCTCCCCCGCCCCTTTTTCTAAAAAACAAACAAACAAAAAAACACACAAAACAA
AAACAGAACAAAAGAAGAGAAGAGAGAAGGAAATTTTATTAATTAAAGATGCTGTGTGATAAAA
TCCCAGCCCAGATTGCTCAGCTGTTTGTACCTGACTTGCCGCCTGCATAGGAGCCAGTTCTGTT
CCTTCTGACTAGCCCCTCTTCCTCCAGGGGAGAACTTCCAAATGTTAATTTTTTCTTTTTGAAA
ATATAAATAATTACTATTTTGTACTGTGTGGTATCTCTGGTCTTTTGTTTCACTCACCTGCCTT
GTCTCTTGGGTCTGAGTCCCTTGCTTAAGGGATTTTGAAGTCCTAGTTTTTAGCTTGCAGAGAT
TATGTTTGAAATGTCTAATGAGCCGTAGGGATTTGTTGAGACTCCGTAATTTCAAGTTTTCTTT
GTGAGCTATCAGCATCTGCCAGTCTCTTGTCCTCCCTGAGTATCTCACAGTCCATATCCTGATG
AGGGATCAGGCCCCTACCTGTGCCAAGGCAAGTAATGGTAGTGGGCTTTTCTGCACCCTGTATG
TTTTAAGACCTAATCCCCACCTCCCTTCTCCTAATTAAATACAAAAAGATCCAGGGGACATAAA
TGTGGAGATTAAATAAAGGGAAATTATTGTCTCTAA

hide sequence

RefSeq Acc Id:

XM_037993497 ⟹ XP_037849425

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666077	41,099,327 - 41,130,684 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008011256	(Get FASTA)	NCBI Sequence Viewer
	XP_008011258	(Get FASTA)	NCBI Sequence Viewer
	XP_008011259	(Get FASTA)	NCBI Sequence Viewer
	XP_037849425	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_008011256 ⟸ XM_008013065

RefSeq Acc Id:

XP_008011259 ⟸ XM_008013068

RefSeq Acc Id:

XP_008011258 ⟸ XM_008013067

RefSeq Acc Id:

XP_037849425 ⟸ XM_037993497

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	SPOP	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-08-09	SPOP	speckle type BTB/POZ protein	LOC103243644	speckle type BTB/POZ protein	Symbol and/or name change	5135510	APPROVED
2020-12-08	LOC103243644	speckle type BTB/POZ protein	SPOP	speckle type BTB/POZ protein	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)