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Gene: RHBDF1 (rhomboid 5 homolog 1) Chlorocebus sabaeus

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Symbol:

RHBDF1

Name:

rhomboid 5 homolog 1

RGD ID:

18359274

Description:

ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN cell migration (inferred); cell population proliferation (inferred); negative regulation of protein secretion (inferred); ASSOCIATED WITH familial focal epilepsy with variable foci 3 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); Golgi apparatus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

inactive rhomboid protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RHBDF1 (rhomboid 5 homolog 1)	NCBI	Ortholog
Mus musculus (house mouse):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	14,935 - 34,991 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	13,071 - 21,883 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	31,194,498 - 31,209,982 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial focal epilepsy with variable foci 3 (ISO)

Wolff-Parkinson-White syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration (IEA)

cell population proliferation (IEA)

negative regulation of protein secretion (IEA)

protein transport (IEA)

regulation of epidermal growth factor receptor signaling pathway (IEA)

regulation of proteasomal protein catabolic process (IEA)

regulation of protein secretion (IEA)

Cellular Component

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

Golgi apparatus (IEA)

Golgi membrane (IEA)

membrane (IEA)

Molecular Function

growth factor binding (IEA)

protein binding (ISO)

serine-type endopeptidase activity (IEA,ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RHBDF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	14,935 - 34,991 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	13,071 - 21,883 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	31,194,498 - 31,209,982 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

RHBDF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	58,059 - 76,360 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	58,059 - 76,355 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	108,058 - 122,629 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	48,058 - 62,591 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	48,058 - 62,591	NCBI
Celera	16	309,954 - 324,535 (-)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	26,451 - 41,032 (-)	NCBI		HuRef
CHM1_1	16	107,996 - 122,575 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	51,596 - 69,903 (-)	NCBI		T2T-CHM13v2.0

Rhbdf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	32,159,585 - 32,172,339 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	32,159,585 - 32,172,300 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	32,209,585 - 32,222,331 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	32,209,585 - 32,222,300 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	32,109,585 - 32,122,293 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	32,109,585 - 32,122,238 (-)	NCBI		MGSCv36	mm8
Celera	11	34,626,680 - 34,639,569 (-)	NCBI		Celera
Cytogenetic Map	11	A4	NCBI
cM Map	11	18.83	NCBI

Rhbdf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	15,911,282 - 15,924,214 (+)	NCBI		GRCr8
mRatBN7.2	10	15,406,832 - 15,419,765 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	15,406,859 - 15,419,763 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	20,152,893 - 20,165,784 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	19,641,781 - 19,654,677 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	15,134,664 - 15,147,558 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	15,672,370 - 15,685,285 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	15,672,382 - 15,685,284 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	15,567,515 - 15,580,428 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	15,653,948 - 15,666,851 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	15,661,089 - 15,667,673 (+)	NCBI
Celera	10	15,074,361 - 15,087,252 (+)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

Rhbdf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	17,078,864 - 17,098,999 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	17,090,962 - 17,098,068 (+)	NCBI	ChiLan1.0	ChiLan1.0

RHBDF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	273,273 - 291,700 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	4,065,373 - 4,083,718 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	16	49,031 - 57,211 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	49,031 - 57,222 (-)	Ensembl	panpan1.1		panPan2

RHBDF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	40,394,654 - 40,413,619 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	40,395,517 - 40,413,606 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	41,652,775 - 41,676,636 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	40,732,787 - 40,756,647 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	40,739,139 - 40,756,645 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	40,420,352 - 40,444,203 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	40,381,279 - 40,405,130 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	40,860,455 - 40,884,315 (+)	NCBI		UU_Cfam_GSD_1.0

Rhbdf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	112,705,206 - 112,712,074 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	803,005 - 813,367 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	802,728 - 810,375 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RHBDF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	41,560,915 - 41,567,593 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	41,548,440 - 41,567,596 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	40,869,445 - 40,888,436 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Rhbdf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624913	937,484 - 954,428 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624913	937,484 - 954,458 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RHBDF1
386 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007979957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007979996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037990089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037990090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000011242 ⟹ ENSCSAP00000009322

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	5	13,071 - 21,883 (-)	Ensembl

RefSeq Acc Id:

XM_007980011 ⟹ XP_007978202

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	14,935 - 30,119 (-)	NCBI
Vero_WHO_p1.0	NW_023666068	31,194,498 - 31,209,982 (+)	NCBI

Sequence:

show sequence

GGGAGGGGTAATTACTGTGGTCCTGAACTGAGTGTGTGCATCACTGTATACAGCACACGTGCAC
ATGTGTGAGTGGTATGAGCATGTACCCATAGAAAGATGTACATGAGTAGGTGGGTGCATGTGAG
CCTGTGCATGTGTAGGCGAATGAACGCATGAAGTGGAAGAATGTGGGAAGGTGTGTGTATGATT
GTGAGTGATCGGTGCACATGAATGTGTGTGAGGGAACTGAGTGCTCAGTGGGATTGGGTGAGTG
TGGGCCTCTGGAGGAGGTCGGGTTTAGGGGAGCCAGGGATACCCACCCATCCTCCACCCTCTAC
CCGGTACCTGCCCTCCCTCCTCACTCCCGGTCTTCTCAGCACAAATCTGGGCAGGACGACAGGT
CAGGCCTCAATCTGGAGCCAGGGGAGAGGCGGAGCTGCCCAGCGCTGATGCTGCCATCAGCTCC
CAACAGGCCCTCCGTTGGGTCAAGGCGCTGGAGACCTCAGCCCCAGGTGTCCCCACGGGCGGAC
TCTGGGGAGAAGGGAGCCCAGCGGCCTTCCGGGAGGTGGTGACTTGGGCCGGGCAGGCGGGCGG
CGCGCATTCCTGAGCCCTGAGTCAGCGCGGCCGCCCCCTCCGGCCGGGCCCGCCCCCGGCGCGC
ACGCCCCTCACTCCATGGCATTCCCGGGCGGGCCGGACCGGCGGGCGGGCGGGGACTCGGCGCG
GGCGCCCTCCCGGCCAGCGGCGGCAGCCCCTCCTCCCTGGAGCCCTCAGGACCCCCCAAGGACC
CCCGGCGGCGGCGGCCTGCCTTGCTCTGCCGGGAACCATGAGTGAGGCCCGCAGGGACAGCACG
AGCAGCCTGCAGCGCAAGAAGCCACCGTGGCTAAAGCTGGACATTCCCTCTGCGGTGCCCCCGA
CAGCAGAAGAGCCCAGCTTCCTGCAGCCCCTGAGGCGACAGGCTTTCCTGAGGAGTGTCAGTAT
GCCAGCTGAGACAGCCCACATCTCTTCGCCCCACCATGAGCTCCGGCGGTCGGTGCTGCAGCGC
CAGACGTCCATCACACAGACCATCCGCAGGGGGACCGCTGACTGGTTTGGAGTGAGCAAGGACA
GTGACAGCACCCAGAAATGGCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGCTATGGAAAGCT
GAAGCCCCAGGTCCTCCGGGAGCTGGACCTGCCCAGCCAGGACAACGTGTCGCTGACCAGCACC
GAGACGCCACCCCCACTGTATGTGGGGCCATGCCAGCTGGGCATGCAGAAGATCATAGACCCCC
TGGCCCGTGGCCGGGCCTTCCGTGTGGCAGATGACACTGCAGAAGGCCTGAGTGCCCCTCACAC
TCCCGTCACACCGGGTGCTGCCTCCCTCTGCTCCTTCTCCAGCTCCCGCTCTGGTTTCCACCGG
CTCCCGCGGCGGCGCAAGCGAGAGTCGGTGGCCAAGATGAGCTTCCGGGCCGCTGCAGCACTGA
TGAAAGGCCGCTCTGTTAGGGATGGCACCTTGCGCCGGGCACAGCGCCGAAGCTTCACTCCAGC
TAGCTTTCTGGAGGAGGACACAACTGATTTCCCCGATGAGCTGGACACATCCTTCTTTGCCCGG
GAAGGTATCCTCCATGAAGAGCTCTCCACATACCCAGACGAAGTTTTTGAGTCCCCATCGGAGG
CAGCACTAAAGGACTGGGAGAAGGCCCCGGAGCAGGCAGACCTCACCGGCGGGGCCCTGGACCG
CAGCGAGCTGGAGCGTAGCCATCTGATGCTGCCCCTGGAGCGAGGCTGGCGGAAGCAGAAGGAG
GGCGCCGCAGCCCCGCAGCCCAAGGTGCGGCTCCGACAGGAGGTGGTGAGCACCGCCGGGCCGC
GGCGGGGCCAGCGCATCGCGGTGCCGGTGCGCAAGCTCTTCGCCCGGGAGAAGCGGCCGTATGG
GCTGGGCATGGTGGGAAGGCTCACCAACCGCACCTACCGCAAGCGCATCGACAGCTTTGTCAAG
CGCCAGATCGAGGACATGGACGACCACAGGCCCTTCTTCACCTACTGGCTTACCTTCGTGCACT
CGCTCGTCACCATTCTAGCCGTGTGCATCTATGGCATCGCGCCAGTGGGCTTCTCGCAGCATGA
AACGGTGGACTCGGTGCTGCGGAACCGCGGGGTCTACGAGAACGTCAAGTACGTGCAGCAGGAG
AACTTCTGGATCGGGCCCAGCTCGGAGGCCCTCATCCACCTGGGCGCCAAGTTTTCCCCCTGCA
TGCGCCAGGACCCGCAGGTGCACAGCTTCATTCGCTCAGCTCGGGAGCGCGAGAAGCACTCGGC
CTGCTGCGTGCGCAACGACAGGTCCGGCTGCGTACAGACCTCGGAGGAGGAGTGCTCGTCCACG
CTGGCAGTGTGGGTGAAGTGGCCCATCCATCCCAGCGCCCCAGAGCTTGCCGGCCACAAGAGAC
AGTTTGGCTCTGTCTGCCACCAGGATCCCAGGGTATGTGATGAGCCCTCCTCTGAAGACCCCCA
TGAGTGGCCAGAAGACATCACCAAGTGGCCGATCTGCACCAAAAACAGCGCCGGGAACCACACT
AACCATCCCCATATGGACTGTGTCATCACAGGACGGCCCTGCTGCATTGGCACCAAGGGCAGGT
GTGAGATCACCTCCCGGGAGTACTGTGACTTCATGAGGGGCTACTTCCATGAGGAGGCCACGCT
CTGCTCTCAGGTGCACTGCATGGATGATGTGTGTGGGCTCCTGCCTTTCCTCAACCCCGAGGTG
CCTGACCAGTTCTACCGCCTGTGGCTGTCCCTCTTCCTGCACGCCGGGATCCTGCACTGCCTGG
TGTCCATCTGCTTCCAGATGACCGTCCTGCGGGACCTGGAGAAGCTGGCAGGCTGGCACCGCAT
AGCCATCATCTACCTGCTAAGTGGTGTCACCGGCAACCTGGCCAGTGCCATCTTCCTGCCGTAC
CGAGCAGAGGTGGGTCCGGCTGGCTCCCAGTTTGGCATCCTGGCCTGCCTCTTTGTGGAGCTCT
TCCAGAGCTGGCAGATCCTAGCACGGCCCTGGCGTGCCTTCTTCAAGCTGCTGGCTGTGGTGCT
CTTCCTCTTCACCTTTGGACTGCTGCCCTGGATCGACAACTTTGCCCACATCTCAGGGTTCATC
AGTGGCCTCTTCCTTTCCTTCGCCTTCTTGCCCTACATCAGCTTTGGCAAGCTCGACCTGTACC
GGAAGCGCTGCCAGATCGTCATCTTTCAGGTGGTCTTCCTGGGCCTCCTGGCTGGCCTGGTGGT
CCTCTTCTACTTCTATCCTGTCCGCTGCGAGTGGTGTGAGTTCCTCACCTGCATCCCCTTCACT
GACAAGTTCTGCGAGAAGTACGAACTGGACGCTCAGCTCCACTGAGCTGGCTGCGGGCTCCAGG
GGTCGTGTGCTCCAGCAGGCCAGAGCCAGACATGACAACTCTGAGCCTCACAGGCTTACAGGAG
TCACCTGCTCCATGCGGGGACTGGCCTGTTTCCTGAACACAGACCTCTTTCTTGTGCCTTGTTC
ACTTCTGTTGAACCCCTCGTACTGCTGGGCATTTATTATACTACTTCCCGTGATAACCTTCTAA
CTTGTTTCTTGACGACCACCTCATGTGGCCAATAAATGGACTGGGAGCGTTTTAGCTGCCATTA
ACTTGA

hide sequence

RefSeq Acc Id:

XM_037990089 ⟹ XP_037846017

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666068	31,194,498 - 31,209,982 (+)	NCBI

RefSeq Acc Id:

XM_037990090 ⟹ XP_037846018

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666068	31,196,427 - 31,209,982 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007978202	(Get FASTA)	NCBI Sequence Viewer
	XP_037846017	(Get FASTA)	NCBI Sequence Viewer
	XP_037846018	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000009322.1

RefSeq Acc Id:	XP_007978202 ⟸ XM_007980011
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RL33 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000009322 ⟸ ENSCSAT00000011242

RefSeq Acc Id:	XP_037846017 ⟸ XM_037990089
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_037846018 ⟸ XM_037990090
- Peptide Label:	isoform X1

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000013151	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000011242.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1540.10	UniProtKB/TrEMBL
InterPro	Inactive_Rhomboid	UniProtKB/TrEMBL
	Peptidase_S54_rhomboid_dom	UniProtKB/TrEMBL
	Rhomboid-like_sf	UniProtKB/TrEMBL
	Rhomboid_SP	UniProtKB/TrEMBL
NCBI Gene	RHBDF1	ENTREZGENE
PANTHER	INACTIVE RHOMBOID PROTEIN	UniProtKB/TrEMBL
	INACTIVE RHOMBOID PROTEIN 1	UniProtKB/TrEMBL
Pfam	Rhomboid	UniProtKB/TrEMBL
	Rhomboid_SP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF144091	UniProtKB/TrEMBL
UniProt	A0A0D9RL33	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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