Rhbdf1 (rhomboid 5 homolog 1) - Rat Genome Database

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Gene: Rhbdf1 (rhomboid 5 homolog 1) Rattus norvegicus
Analyze
Symbol: Rhbdf1
Name: rhomboid 5 homolog 1
RGD ID: 1305075
Description: Predicted to enable growth factor binding activity. Predicted to be involved in several processes, including negative regulation of protein secretion; regulation of epidermal growth factor receptor signaling pathway; and regulation of proteasomal protein catabolic process. Predicted to be located in Golgi membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human RHBDF1 (rhomboid 5 homolog 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4-amino-2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: inactive rhomboid protein 1; iRhom1; LOC303008; MGC124815; rhomboid 5 homolog 1 (Drosophila); rhomboid family 1; rhomboid family 1 (Drosophila); rhomboid family member 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21015,406,832 - 15,419,765 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1015,406,859 - 15,419,763 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1020,152,893 - 20,165,784 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01019,641,781 - 19,654,677 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01015,134,664 - 15,147,558 (+)NCBIRnor_WKY
Rnor_6.01015,672,370 - 15,685,285 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1015,672,382 - 15,685,284 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01015,567,515 - 15,580,428 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,653,948 - 15,666,851 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11015,661,089 - 15,667,673 (+)NCBI
Celera1015,074,361 - 15,087,252 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
estrone  (ISO)
ethanol  (ISO)
fenthion  (ISO)
fenvalerate  (EXP)
fulvestrant  (ISO)
genistein  (ISO)
indometacin  (ISO)
mestranol  (ISO)
methamphetamine  (EXP)
methidathion  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
ozone  (ISO)
paracetamol  (ISO)
pentachlorophenol  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
SCH 23390  (EXP)
sodium arsenite  (ISO)
sodium dodecyl sulfate  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP,ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
trichostatin A  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:18832597   PMID:21439629  


Genomics

Comparative Map Data
Rhbdf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21015,406,832 - 15,419,765 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1015,406,859 - 15,419,763 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1020,152,893 - 20,165,784 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01019,641,781 - 19,654,677 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01015,134,664 - 15,147,558 (+)NCBIRnor_WKY
Rnor_6.01015,672,370 - 15,685,285 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1015,672,382 - 15,685,284 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01015,567,515 - 15,580,428 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,653,948 - 15,666,851 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11015,661,089 - 15,667,673 (+)NCBI
Celera1015,074,361 - 15,087,252 (+)NCBICelera
Cytogenetic Map10q12NCBI
RHBDF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381658,059 - 76,360 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1658,059 - 76,355 (-)EnsemblGRCh38hg38GRCh38
GRCh3716108,058 - 122,629 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361648,058 - 62,591 (-)NCBINCBI36Build 36hg18NCBI36
Build 341648,058 - 62,591NCBI
Celera16309,954 - 324,535 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef1626,451 - 41,032 (-)NCBIHuRef
CHM1_116107,996 - 122,575 (-)NCBICHM1_1
T2T-CHM13v2.01651,596 - 66,174 (-)NCBIT2T-CHM13v2.0
Rhbdf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,159,585 - 32,172,339 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,159,585 - 32,172,300 (-)EnsemblGRCm39 Ensembl
GRCm381132,209,585 - 32,222,331 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,209,585 - 32,222,300 (-)EnsemblGRCm38mm10GRCm38
MGSCv371132,109,585 - 32,122,293 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,109,585 - 32,122,238 (-)NCBIMGSCv36mm8
Celera1134,626,680 - 34,639,569 (-)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.83NCBI
Rhbdf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544217,078,864 - 17,098,999 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544217,090,962 - 17,098,068 (+)NCBIChiLan1.0ChiLan1.0
RHBDF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11649,031 - 57,211 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1649,031 - 57,222 (-)Ensemblpanpan1.1panPan2
RHBDF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1640,394,654 - 40,413,619 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl640,395,517 - 40,413,606 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha641,652,775 - 41,676,636 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0640,732,787 - 40,756,647 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl640,739,139 - 40,756,645 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1640,420,352 - 40,444,203 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0640,381,279 - 40,405,130 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0640,860,455 - 40,884,315 (+)NCBIUU_Cfam_GSD_1.0
Rhbdf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344112,705,206 - 112,712,074 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936501803,005 - 813,367 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936501802,728 - 810,375 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHBDF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl341,560,915 - 41,567,593 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1341,548,440 - 41,567,596 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2340,869,445 - 40,888,436 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RHBDF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1514,935 - 34,991 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl513,071 - 21,883 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606831,194,498 - 31,209,982 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rhbdf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913937,484 - 954,428 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624913937,484 - 954,458 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rhbdf1
52 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:95
Interacting mature miRNAs:101
Transcripts:ENSRNOT00000027965
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
1576304Schws7Schwannoma susceptibility QTL 70.0115nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)10476552719816042Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10514402717245662Rat
737820Alc9Alcohol consumption QTL 92.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10514402719233348Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)10538701450387014Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10538701450387014Rat
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10615418215990232Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101502851360430477Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat

Markers in Region
REN94523  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21015,418,643 - 15,418,890 (+)MAPPERmRatBN7.2
Rnor_6.01015,684,165 - 15,684,411NCBIRnor6.0
Rnor_5.01015,579,308 - 15,579,554UniSTSRnor5.0
RGSC_v3.41015,665,731 - 15,665,977UniSTSRGSC3.4
Celera1015,086,132 - 15,086,378UniSTS
Cytogenetic Map10q12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 34 6 6 6 2 41 29 32 11
Low 9 51 35 19 35 8 9 33 6 9 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000027965   ⟹   ENSRNOP00000027965
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1015,406,859 - 15,419,763 (+)Ensembl
Rnor_6.0 Ensembl1015,672,382 - 15,685,284 (+)Ensembl
RefSeq Acc Id: NM_001030034   ⟹   NP_001025205
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,406,859 - 15,419,764 (+)NCBI
Rnor_6.01015,672,382 - 15,685,285 (+)NCBI
Rnor_5.01015,567,515 - 15,580,428 (+)NCBI
RGSC_v3.41015,653,948 - 15,666,851 (+)RGD
Celera1015,074,361 - 15,087,252 (+)RGD
Sequence:
RefSeq Acc Id: XM_039085877   ⟹   XP_038941805
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,406,832 - 15,419,764 (+)NCBI
RefSeq Acc Id: XM_039085878   ⟹   XP_038941806
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,406,832 - 15,419,764 (+)NCBI
RefSeq Acc Id: XM_039085879   ⟹   XP_038941807
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,406,848 - 15,419,765 (+)NCBI
RefSeq Acc Id: XM_039085880   ⟹   XP_038941808
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,407,690 - 15,419,764 (+)NCBI
RefSeq Acc Id: XM_039085881   ⟹   XP_038941809
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,406,832 - 15,419,764 (+)NCBI
RefSeq Acc Id: XM_039085882   ⟹   XP_038941810
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21015,414,211 - 15,419,765 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_001025205   ⟸   NM_001030034
- UniProtKB: Q499S9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000027965   ⟸   ENSRNOT00000027965
RefSeq Acc Id: XP_038941806   ⟸   XM_039085878
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038941805   ⟸   XM_039085877
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038941809   ⟸   XM_039085881
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038941807   ⟸   XM_039085879
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038941808   ⟸   XM_039085880
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038941810   ⟸   XM_039085882
- Peptide Label: isoform X3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q499S9-F1-model_v2 AlphaFold Q499S9 1-856 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697081
Promoter ID:EPDNEW_R7604
Type:initiation region
Name:Rhbdf1_1
Description:rhomboid 5 homolog 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01015,672,379 - 15,672,439EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305075 AgrOrtholog
BioCyc Gene G2FUF-25697 BioCyc
Ensembl Genes ENSRNOG00000020594 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSRNOP00000027965 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000027965 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1540.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7933232 IMAGE-MGC_LOAD
InterPro Peptidase_S54_rhomboid_dom UniProtKB/Swiss-Prot
  Rhomboid-like_sf UniProtKB/Swiss-Prot
  Rhomboid_SP UniProtKB/Swiss-Prot
KEGG Report rno:303008 UniProtKB/Swiss-Prot
MGC_CLONE MGC:124815 IMAGE-MGC_LOAD
NCBI Gene 303008 ENTREZGENE
Pfam Rhomboid UniProtKB/Swiss-Prot
  Rhomboid_SP UniProtKB/Swiss-Prot
PhenoGen Rhbdf1 PhenoGen
Superfamily-SCOP SSF144091 UniProtKB/Swiss-Prot
UniProt Q499S9 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-18 Rhbdf1  rhomboid 5 homolog 1  Rhbdf1  rhomboid 5 homolog 1 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-04 Rhbdf1  rhomboid 5 homolog 1 (Drosophila)  Rhbdf1  rhomboid family 1 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Rhbdf1  rhomboid family 1 (Drosophila)  Rhbdf1_predicted  rhomboid family 1 (Drosophila) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Rhbdf1_predicted  rhomboid family 1 (Drosophila) (predicted)      Symbol and Name status set to approved 70820 APPROVED