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Gene: B3gnt8 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8) Mus musculus

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Symbol:

B3gnt8

Name:

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

RGD ID:

1622061

MGI Page

MGI

Description:

Predicted to enable protein N-acetylglucosaminyltransferase activity. Predicted to be involved in poly-N-acetyllactosamine biosynthetic process and protein O-linked glycosylation. Predicted to be active in Golgi membrane. Is expressed in alimentary system; integumental system; nervous system; and nucleus pulposus. Orthologous to human B3GNT8 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

B3gal; B3galt7; B7galt7; BC025206; beta-1,3-Gn-T8; beta-1,3-N-acetylglucosaminyltransferase 8; beta3Gn-T8; BGnT-8; MGC32391; UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	25,327,025 - 25,328,917 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	25,326,079 - 25,334,525 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	25,627,600 - 25,629,492 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	25,626,654 - 25,635,100 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	26,412,643 - 26,414,509 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	25,336,384 - 25,338,252 (+)	NCBI		MGSCv36	mm8
Celera	7	20,236,645 - 20,238,511 (+)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	13.94	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Carpenter Syndrome 2 (ISO)

congenital hypoplastic anemia (ISO)

craniosynostosis 1 (ISO)

Diamond-Blackfan anemia (ISO)

maple syrup urine disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

4,4'-sulfonyldiphenol (EXP)

4-hydroxyphenyl retinamide (EXP)

afimoxifene (EXP)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

atrazine (ISO)

Azoxymethane (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

choline (EXP)

dextran sulfate (EXP)

dibutyl phthalate (EXP)

dorsomorphin (ISO)

endosulfan (ISO)

folic acid (EXP)

gentamycin (ISO)

L-methionine (EXP)

lipopolysaccharide (EXP,ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (EXP)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

titanium dioxide (EXP)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

poly-N-acetyllactosamine biosynthetic process (IBA,ISO,ISS)

protein glycosylation (IEA)

protein O-linked glycosylation (IBA)

Cellular Component

Golgi membrane (IBA,IEA)

Molecular Function

protein binding (ISO)

protein N-acetylglucosaminyltransferase activity (IBA,ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:14681479	PMID:16141072	PMID:16141073	PMID:18826941	PMID:21267068	PMID:21873635
PMID:27480124

Genomics

Comparative Map Data

B3gnt8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	25,327,025 - 25,328,917 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	25,326,079 - 25,334,525 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	25,627,600 - 25,629,492 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	25,626,654 - 25,635,100 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	26,412,643 - 26,414,509 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	25,336,384 - 25,338,252 (+)	NCBI		MGSCv36	mm8
Celera	7	20,236,645 - 20,238,511 (+)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	13.94	NCBI

B3GNT8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	41,425,359 - 41,428,730 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	41,425,359 - 41,428,730 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	41,931,264 - 41,934,635 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	46,623,104 - 46,626,475 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	46,623,104 - 46,626,475	NCBI
Celera	19	38,731,099 - 38,734,479 (-)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	38,363,040 - 38,366,420 (-)	NCBI		HuRef
CHM1_1	19	41,930,949 - 41,934,320 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	44,246,583 - 44,249,963 (-)	NCBI		T2T-CHM13v2.0

B3gnt8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	90,263,387 - 90,266,292 (+)	NCBI		GRCr8
mRatBN7.2	1	81,135,602 - 81,138,501 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	81,135,499 - 81,142,263 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	86,527,798 - 86,530,697 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	95,079,711 - 95,082,610 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	88,283,593 - 88,286,492 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	82,419,264 - 82,422,852 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	82,419,947 - 82,422,846 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	83,681,429 - 83,684,357 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	80,834,562 - 80,837,461 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	80,912,258 - 80,915,413 (+)	NCBI
Celera	1	75,575,956 - 75,578,855 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

B3gnt8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955555	357,726 - 359,695 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955555	357,726 - 359,695 (-)	NCBI	ChiLan1.0	ChiLan1.0

B3GNT8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	47,636,090 - 47,641,517 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	49,504,977 - 49,508,261 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	38,419,180 - 38,422,360 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	46,925,525 - 46,927,751 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	46,925,762 - 46,926,955 (-)	Ensembl	panpan1.1		panPan2

B3GNT8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	112,576,992 - 112,579,104 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	111,981,161 - 111,983,281 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	113,175,082 - 113,177,202 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	113,175,624 - 113,179,353 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	112,736,370 - 112,738,490 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	112,368,713 - 112,370,834 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	113,361,967 - 113,364,087 (+)	NCBI		UU_Cfam_GSD_1.0

B3gnt8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	15,389,477 - 15,391,823 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936661	3,818,120 - 3,819,307 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936661	3,817,791 - 3,819,854 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

B3GNT8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	49,399,123 - 49,402,661 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	49,399,121 - 49,403,686 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	45,230,322 - 45,234,561 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

B3GNT8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	35,747,599 - 35,751,265 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	35,747,833 - 35,749,026 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	13,983,730 - 13,986,454 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

B3gnt8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624907	225,888 - 227,081 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624907	225,662 - 227,649 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in B3gnt8
88 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	142
Count of miRNA genes:	116
Interacting mature miRNAs:	124
Transcripts:	ENSMUST00000076034
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300722	Sle3_m	systemic lupus erythmatosus susceptibility 3 (mouse)			Not determined		7	3511728	87142720	Mouse
25314307	Mlh1fc2_m	MLH1 foci count 2 (mouse)					7	6502999	133501729	Mouse
4141566	Femwf8_m	femur work to failure 8 (mouse)			Not determined			13032485	47032621	Mouse
1301041	Prnr2_m	prion resistance 2 (mouse)			Not determined		7	18728794	39674033	Mouse
12904742	Litsq2_m	litter size QTL 2 (mouse)					7	22673887	56674033	Mouse
1301622	Eae12_m	susceptibility to experimental allergic encephalomyelitis 12 (mouse)			Not determined		7	19280015	53280104	Mouse
11354952	Pdcc1_m	plasmacytoid dentritic cell compartment 1 (mouse)					7	23066531	57066531	Mouse
38501068	Tip1_m	tuberculosis immunophenotype 1, spleen CFU (mouse)					7	3602999	72549748	Mouse
25314314	Sccor1_m	synaptonemal complex length to mean MLH1 count ratio 1 (mouse)					7	13333925	47349748	Mouse
10449139	Eosn1_m	eosinophil differential 1 (mouse)					7	12480877	46480877	Mouse
1301052	Bhr6_m	bronchial hyperresponsiveness 6 (mouse)			Not determined		7	19842250	53842367	Mouse
11522751	Cocia17_m	cocaine-induced activity, QTL 17 (mouse)					7	13135204	47135204	Mouse
12792978	Fbmd3_m	femoral bone mineral density 3, females only (mouse)					7	7050288	142367832	Mouse
1301158	Eae4_m	susceptibility to experimental allergic encephalomyelitis 4 (mouse)			Not determined		7	19147398	141919804	Mouse
1301572	Sluc30_m	susceptibility to lung cancer 30 (mouse)			Not determined		7	2431696	36431844	Mouse
1357699	Nhdlq6_m	non-HDL QTL 6 (mouse)			Not determined		7	9988867	43988984	Mouse
10449158	Eosn3_m	eosinophil differential 3 (mouse)					7	12480877	46480877	Mouse
10412199	Sst2_m	susceptibility to tuberculosis 2 (mouse)			Not determined		7	18728794	119485380	Mouse
1558893	Spir1_m	Streptococcus pneumoniae infection resistance 1 (mouse)			Not determined		7	10305798	44305936	Mouse
1301709	Bdt4_m	bone density traits 4 (mouse)			Not determined		7	22888572	56888716	Mouse
1559016	Drsi_m	DCC-related Spp1 induction (mouse)			Not determined		7	16637293	49159331	Mouse

Markers in Region

Bckdha

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	7	25,630,254 - 25,631,074	UniSTS	GRCm38
MGSCv37	7	26,415,273 - 26,416,093	UniSTS	GRCm37
Celera	7	20,239,275 - 20,240,095	UniSTS
Cytogenetic Map	7	A3	UniSTS
cM Map	UN		UniSTS
cM Map	7		UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001036740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_146184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006539853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC162614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK042388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC025206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY206280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY320287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY554292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000076034 ⟹ ENSMUSP00000092277

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	25,327,063 - 25,328,917 (+)	Ensembl
GRCm38.p6 Ensembl	7	25,627,638 - 25,629,492 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000205281 ⟹ ENSMUSP00000146127

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	25,326,079 - 25,327,850 (+)	Ensembl
GRCm38.p6 Ensembl	7	25,626,654 - 25,628,425 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000206824

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	25,327,067 - 25,328,910 (+)	Ensembl
GRCm38.p6 Ensembl	7	25,627,642 - 25,629,485 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000206940 ⟹ ENSMUSP00000145797

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	25,327,062 - 25,334,525 (+)	Ensembl
GRCm38.p6 Ensembl	7	25,627,637 - 25,635,100 (+)	Ensembl

RefSeq Acc Id:

NM_001036740 ⟹ NP_001031817

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	25,327,049 - 25,328,915 (+)	NCBI
GRCm38	7	25,627,624 - 25,629,490 (+)	NCBI
MGSCv37	7	26,412,643 - 26,414,509 (+)	RGD
Celera	7	20,236,645 - 20,238,511 (+)	RGD
cM Map	7		ENTREZGENE

Sequence:

show sequence

GGGCTGGGCCGACAGCTTGAGGACGCACAGCTGCGAGGAGGGAGTCCGGGCAGGGCTTTACCCG
AGGACCCCCAGAGCTGGCGGAAGCTGGACCCAGAGCCCCACTGGTGGCCCTTTCCCTGGGCCGG
GTCATGCGTTGCCGCAAGTGCCAGCTCTGCCTGTCAGCACTGCTCACACTCCTGGGCCTCAAAG
TATACATCGAGTGGACATCCGAGTCCTGGCTTAAAAAGGCTGAACCCCGGGGCGCTCTGCCCAG
TCCCACACCACCCAATGCTGAGCCCACTCTGCCCACCAACCTCTCAGCACGCCTGGGTCAGACT
GGCCCACTGTCCTCTGCTTACTGGAACCAGCAGCAGCGGCAGCTGGGAGTCCTGCCCAGTACGG
ACTGTCAGACTTGGGGGACTGTTGCTGCCTCGGAGATCTTGGACTTCATCCTGTACCCCCAGGA
GCTTCGGCGCTTCTTGCTGTCGGCGGCCTGTAGGAGCTTTCCACTATGGCTGCCTGCAGGAGAA
GGCAGCCCTGTGGCCAGCTGCTCTGATAAGGATGTACCCTACTTGCTACTGGCTGTCAAATCAG
AACCAGGACACTTTGCAGCACGGCAGGCTGTGAGGGAGACCTGGGGCAGCCCAGTTGCTGGGAC
CCGGTTGCTCTTCCTGCTGGGGTCCCCCCTAGGAATGGGGGGGCCTGACTTAAGATCACTGGTG
ACGTGGGAAAGCCGGCGCTATGGTGACCTACTGCTCTGGGACTTCCTGGATGTTCCCTACAACC
GGACACTCAAGGACCTGCTGCTGCTGACCTGGCTGAGCCACCACTGCCCCGATGTCAATTTTGT
CCTGCAGGTTCAGGATGATGCCTTTGTGCACATCCCAGCCCTACTGGAGCACCTGCAGACTCTG
CCACCCACCTGGGCCCGCAGCCTCTACCTGGGTGAGATCTTCACCCAGGCCAAACCGCTCCGCA
AGCCCGGAGGACCCTTCTATGTGCCGAAGACCTTCTTTGAAGGGGACTATCCAGCCTATGCGAG
TGGAGGTGGCTATGTAATCTCAGGACGCCTGGCACCCTGGCTGCTGCAGGCGGCAGCTCGCGTG
GCACCCTTCCCCTTTGATGATGTCTACACTGGCTTCTGCTTCCGTGCCCTGGGCTTAGCACCCC
GTGCCCATCCAGGCTTCCTCACAGCCTGGCCAGCAGAACGTACCAGGGACCCCTGCGCCGTGCG
AGGCCTGCTCTTGGTGCATCCAGTCAGCCCTCAGGACACCATTTGGCTCTGGAGACATCTGTGG
GTCCCAGAGCTCCAGTGCTGACCGGCAGAGACAAGCTGGGGTGGGTGGGTGCTGACCTGGCCTG
AGTCTCTCCTAGAGACAAGCTGGGGTGGGTGGGGCTGACCTGGCCTGAGTCTCTCCTAAACCCT
TCTTAGCCAAGGTGGCAGACTGTGTTTATCTACTTTATGGTTTTGAAAAATGTGTCCTTCCTAC
TCC

hide sequence

RefSeq Acc Id:

NM_146184 ⟹ NP_666296

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	25,327,049 - 25,328,915 (+)	NCBI
GRCm38	7	25,627,624 - 25,629,490 (+)	NCBI
MGSCv37	7	26,412,643 - 26,414,509 (+)	RGD
Celera	7	20,236,645 - 20,238,511 (+)	RGD
cM Map	7		ENTREZGENE

Sequence:

show sequence

GGGCTGGGCCGACAGCTTGAGGACGCACAGCTGCGAGGAGGGAGTCCGGGCAGGGCTTTACCCG
AGGACCCCCAGAGCTGGCGGAAGCTGGACCCAGAGGTACCTGGGGCCCCAGGCCCTGGGGTGGG
GTTACTGGAGGAGGTAGGTAGGCTTCCAAGAAGGTAAAAAGGAGTTTCCCCGGGAAGCTGGGAC
TCCTGAAGAGACAGAGGAATGAGGGAAGGGGAGTAGGAAGAGCCGTTGGAGCGATACTGCAAAT
AGATATAACACCATGACTGCAGAAAAGGAAAGAATGGGGGGTCGAGGGGAGGCGGTGTTCAGTC
TAGGATAACGTTAAGTTGGGTACTGTAGTTCAGTCTGCCTAGGGTCAGAGTCTCAGAAGCCATT
AACAGAACTGGGTAGGACCTAGGCTGCTTGCCTGGGCTTCGCTGGGCCGTCTTTGGAGATCCAC
CCTGCACCCTAAAGACTTCTGTGGCTCCTTGTGACTCTTGCAGCCCCACTGGTGGCCCTTTCCC
TGGGCCGGGTCATGCGTTGCCGCAAGTGCCAGCTCTGCCTGTCAGCACTGCTCACACTCCTGGG
CCTCAAAGTATACATCGAGTGGACATCCGAGTCCTGGCTTAAAAAGGCTGAACCCCGGGGCGCT
CTGCCCAGTCCCACACCACCCAATGCTGAGCCCACTCTGCCCACCAACCTCTCAGCACGCCTGG
GTCAGACTGGCCCACTGTCCTCTGCTTACTGGAACCAGCAGCAGCGGCAGCTGGGAGTCCTGCC
CAGTACGGACTGTCAGACTTGGGGGACTGTTGCTGCCTCGGAGATCTTGGACTTCATCCTGTAC
CCCCAGGAGCTTCGGCGCTTCTTGCTGTCGGCGGCCTGTAGGAGCTTTCCACTATGGCTGCCTG
CAGGAGAAGGCAGCCCTGTGGCCAGCTGCTCTGATAAGGATGTACCCTACTTGCTACTGGCTGT
CAAATCAGAACCAGGACACTTTGCAGCACGGCAGGCTGTGAGGGAGACCTGGGGCAGCCCAGTT
GCTGGGACCCGGTTGCTCTTCCTGCTGGGGTCCCCCCTAGGAATGGGGGGGCCTGACTTAAGAT
CACTGGTGACGTGGGAAAGCCGGCGCTATGGTGACCTACTGCTCTGGGACTTCCTGGATGTTCC
CTACAACCGGACACTCAAGGACCTGCTGCTGCTGACCTGGCTGAGCCACCACTGCCCCGATGTC
AATTTTGTCCTGCAGGTTCAGGATGATGCCTTTGTGCACATCCCAGCCCTACTGGAGCACCTGC
AGACTCTGCCACCCACCTGGGCCCGCAGCCTCTACCTGGGTGAGATCTTCACCCAGGCCAAACC
GCTCCGCAAGCCCGGAGGACCCTTCTATGTGCCGAAGACCTTCTTTGAAGGGGACTATCCAGCC
TATGCGAGTGGAGGTGGCTATGTAATCTCAGGACGCCTGGCACCCTGGCTGCTGCAGGCGGCAG
CTCGCGTGGCACCCTTCCCCTTTGATGATGTCTACACTGGCTTCTGCTTCCGTGCCCTGGGCTT
AGCACCCCGTGCCCATCCAGGCTTCCTCACAGCCTGGCCAGCAGAACGTACCAGGGACCCCTGC
GCCGTGCGAGGCCTGCTCTTGGTGCATCCAGTCAGCCCTCAGGACACCATTTGGCTCTGGAGAC
ATCTGTGGGTCCCAGAGCTCCAGTGCTGACCGGCAGAGACAAGCTGGGGTGGGTGGGTGCTGAC
CTGGCCTGAGTCTCTCCTAGAGACAAGCTGGGGTGGGTGGGGCTGACCTGGCCTGAGTCTCTCC
TAAACCCTTCTTAGCCAAGGTGGCAGACTGTGTTTATCTACTTTATGGTTTTGAAAAATGTGTC
CTTCCTACTCC

hide sequence

RefSeq Acc Id:

XM_006539853 ⟹ XP_006539916

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	25,327,025 - 25,328,917 (+)	NCBI
GRCm38	7	25,627,600 - 25,629,492 (+)	NCBI

Sequence:

show sequence

CCCGCCCCTCCAGACTTGCAGCGCGGGCTGGGCCGACAGCTTGAGGACGCACAGCTGCGAGGAG
GGAGTCCGGGCAGGGCTTTACCCGAGGACCCCCAGAGCTGGCGGAAGCTGGACCCAGAGGTACC
TGGGGCCCCAGGCCCTGGGGTGGGGTTACTGGAGGAGCCCCACTGGTGGCCCTTTCCCTGGGCC
GGGTCATGCGTTGCCGCAAGTGCCAGCTCTGCCTGTCAGCACTGCTCACACTCCTGGGCCTCAA
AGTATACATCGAGTGGACATCCGAGTCCTGGCTTAAAAAGGCTGAACCCCGGGGCGCTCTGCCC
AGTCCCACACCACCCAATGCTGAGCCCACTCTGCCCACCAACCTCTCAGCACGCCTGGGTCAGA
CTGGCCCACTGTCCTCTGCTTACTGGAACCAGCAGCAGCGGCAGCTGGGAGTCCTGCCCAGTAC
GGACTGTCAGACTTGGGGGACTGTTGCTGCCTCGGAGATCTTGGACTTCATCCTGTACCCCCAG
GAGCTTCGGCGCTTCTTGCTGTCGGCGGCCTGTAGGAGCTTTCCACTATGGCTGCCTGCAGGAG
AAGGCAGCCCTGTGGCCAGCTGCTCTGATAAGGATGTACCCTACTTGCTACTGGCTGTCAAATC
AGAACCAGGACACTTTGCAGCACGGCAGGCTGTGAGGGAGACCTGGGGCAGCCCAGTTGCTGGG
ACCCGGTTGCTCTTCCTGCTGGGGTCCCCCCTAGGAATGGGGGGGCCTGACTTAAGATCACTGG
TGACGTGGGAAAGCCGGCGCTATGGTGACCTACTGCTCTGGGACTTCCTGGATGTTCCCTACAA
CCGGACACTCAAGGACCTGCTGCTGCTGACCTGGCTGAGCCACCACTGCCCCGATGTCAATTTT
GTCCTGCAGGTTCAGGATGATGCCTTTGTGCACATCCCAGCCCTACTGGAGCACCTGCAGACTC
TGCCACCCACCTGGGCCCGCAGCCTCTACCTGGGTGAGATCTTCACCCAGGCCAAACCGCTCCG
CAAGCCCGGAGGACCCTTCTATGTGCCGAAGACCTTCTTTGAAGGGGACTATCCAGCCTATGCG
AGTGGAGGTGGCTATGTAATCTCAGGACGCCTGGCACCCTGGCTGCTGCAGGCGGCAGCTCGCG
TGGCACCCTTCCCCTTTGATGATGTCTACACTGGCTTCTGCTTCCGTGCCCTGGGCTTAGCACC
CCGTGCCCATCCAGGCTTCCTCACAGCCTGGCCAGCAGAACGTACCAGGGACCCCTGCGCCGTG
CGAGGCCTGCTCTTGGTGCATCCAGTCAGCCCTCAGGACACCATTTGGCTCTGGAGACATCTGT
GGGTCCCAGAGCTCCAGTGCTGACCGGCAGAGACAAGCTGGGGTGGGTGGGTGCTGACCTGGCC
TGAGTCTCTCCTAGAGACAAGCTGGGGTGGGTGGGGCTGACCTGGCCTGAGTCTCTCCTAAACC
CTTCTTAGCCAAGGTGGCAGACTGTGTTTATCTACTTTATGGTTTTGAAAAATGTGTCCTTCCT
ACTCCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001031817	(Get FASTA)	NCBI Sequence Viewer
	NP_666296	(Get FASTA)	NCBI Sequence Viewer
	XP_006539916	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH25206	(Get FASTA)	NCBI Sequence Viewer
	BAC31246	(Get FASTA)	NCBI Sequence Viewer
	BAE32443	(Get FASTA)	NCBI Sequence Viewer
	BAE32912	(Get FASTA)	NCBI Sequence Viewer
	EDL24249	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000092277
	ENSMUSP00000092277.5
	ENSMUSP00000145797.2
	ENSMUSP00000146127.2
GenBank Protein	Q8R3I9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001031817 ⟸ NM_001036740

- UniProtKB:

Q8R3I9 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MRCRKCQLCLSALLTLLGLKVYIEWTSESWLKKAEPRGALPSPTPPNAEPTLPTNLSARLGQTG
PLSSAYWNQQQRQLGVLPSTDCQTWGTVAASEILDFILYPQELRRFLLSAACRSFPLWLPAGEG
SPVASCSDKDVPYLLLAVKSEPGHFAARQAVRETWGSPVAGTRLLFLLGSPLGMGGPDLRSLVT
WESRRYGDLLLWDFLDVPYNRTLKDLLLLTWLSHHCPDVNFVLQVQDDAFVHIPALLEHLQTLP
PTWARSLYLGEIFTQAKPLRKPGGPFYVPKTFFEGDYPAYASGGGYVISGRLAPWLLQAAARVA
PFPFDDVYTGFCFRALGLAPRAHPGFLTAWPAERTRDPCAVRGLLLVHPVSPQDTIWLWRHLWV
PELQC

hide sequence

RefSeq Acc Id:

NP_666296 ⟸ NM_146184

- UniProtKB:

Q8R3I9 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MRCRKCQLCLSALLTLLGLKVYIEWTSESWLKKAEPRGALPSPTPPNAEPTLPTNLSARLGQTG
PLSSAYWNQQQRQLGVLPSTDCQTWGTVAASEILDFILYPQELRRFLLSAACRSFPLWLPAGEG
SPVASCSDKDVPYLLLAVKSEPGHFAARQAVRETWGSPVAGTRLLFLLGSPLGMGGPDLRSLVT
WESRRYGDLLLWDFLDVPYNRTLKDLLLLTWLSHHCPDVNFVLQVQDDAFVHIPALLEHLQTLP
PTWARSLYLGEIFTQAKPLRKPGGPFYVPKTFFEGDYPAYASGGGYVISGRLAPWLLQAAARVA
PFPFDDVYTGFCFRALGLAPRAHPGFLTAWPAERTRDPCAVRGLLLVHPVSPQDTIWLWRHLWV
PELQC

hide sequence

RefSeq Acc Id:	XP_006539916 ⟸ XM_006539853
- Peptide Label:	isoform X1
- UniProtKB:	Q8R3I9 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MRCRKCQLCLSALLTLLGLKVYIEWTSESWLKKAEPRGALPSPTPPNAEPTLPTNLSARLGQTG PLSSAYWNQQQRQLGVLPSTDCQTWGTVAASEILDFILYPQELRRFLLSAACRSFPLWLPAGEG SPVASCSDKDVPYLLLAVKSEPGHFAARQAVRETWGSPVAGTRLLFLLGSPLGMGGPDLRSLVT WESRRYGDLLLWDFLDVPYNRTLKDLLLLTWLSHHCPDVNFVLQVQDDAFVHIPALLEHLQTLP PTWARSLYLGEIFTQAKPLRKPGGPFYVPKTFFEGDYPAYASGGGYVISGRLAPWLLQAAARVA PFPFDDVYTGFCFRALGLAPRAHPGFLTAWPAERTRDPCAVRGLLLVHPVSPQDTIWLWRHLWV PELQC hide sequence

Ensembl Acc Id:

ENSMUSP00000145797 ⟸ ENSMUST00000206940

Ensembl Acc Id:

ENSMUSP00000146127 ⟸ ENSMUST00000205281

Ensembl Acc Id:

ENSMUSP00000092277 ⟸ ENSMUST00000076034

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8R3I9-F1-model_v2	AlphaFold	Q8R3I9	1-389	view protein structure

Promoters

RGD ID:

6892290

Promoter ID:

EPDNEW_M9596

Type:

initiation region

Name:

B3gnt8_1

Description:

Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase8 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	7	25,627,611 - 25,627,671	EPDNEW

RGD ID:

6840682

Promoter ID:

MM_KWN:49462

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, Lung

Transcripts:

ENSMUST00000076034, NM_146184

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	7	26,411,791 - 26,414,077 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2385269	AgrOrtholog
Ensembl Genes	ENSMUSG00000059479	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000076034	ENTREZGENE
	ENSMUST00000076034.8	UniProtKB/Swiss-Prot
	ENSMUST00000205281.2	UniProtKB/TrEMBL
	ENSMUST00000206824	ENTREZGENE
	ENSMUST00000206940.2	UniProtKB/Swiss-Prot
Gene3D-CATH	3.90.550.50	UniProtKB/Swiss-Prot
InterPro	Glyco_trans_31	UniProtKB/Swiss-Prot
KEGG Report	mmu:232984	UniProtKB/Swiss-Prot
MGD	MGI:2385269	ENTREZGENE
NCBI Gene	232984	ENTREZGENE
PANTHER	PTHR11214	UniProtKB/Swiss-Prot
	UDP-GLCNAC:BETAGAL BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8	UniProtKB/Swiss-Prot
Pfam	Galactosyl_T	UniProtKB/Swiss-Prot
PhenoGen	B3gnt8	PhenoGen
UniProt	A0A0U1RPU4_MOUSE	UniProtKB/TrEMBL
	B3GN8_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar