Dpagt1 (dolichyl-phosphate N-acetylglucosaminephosphotransferase 1) - Rat Genome Database

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Gene: Dpagt1 (dolichyl-phosphate N-acetylglucosaminephosphotransferase 1) Mus musculus
Analyze
Symbol: Dpagt1
Name: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
RGD ID: 1620919
MGI Page MGI
Description: Enables UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity. Predicted to be involved in UDP-N-acetylglucosamine metabolic process and dolichol-linked oligosaccharide biosynthetic process. Predicted to be located in intracellular membrane-bounded organelle and membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ij and congenital myasthenic syndrome 13. Orthologous to human DPAGT1 (dolichyl-phosphate N-acetylglucosaminephosphotransferase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU021132; dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase); dolichyl-phosphate alpha-N-acetylglucosaminephosphotransferase 2; Dpag; Dpagt2; G1PT; glcNAc-1-P transferase; Gn; Gnpta; GP; GPT; N-acetylglucosamine-1-phosphate transferase; UDP-N-acetylglucosamine lysosomal enzyme N-acetylglucosamine phosphotransferase; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39944,237,314 - 44,247,374 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl944,237,316 - 44,245,197 (+)EnsemblGRCm39 Ensembl
GRCm38944,325,857 - 44,333,895 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl944,326,019 - 44,333,900 (+)EnsemblGRCm38mm10GRCm38
MGSCv37944,134,928 - 44,141,683 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36944,077,840 - 44,084,595 (+)NCBIMGSCv36mm8
Celera941,581,588 - 41,588,325 (+)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map924.84NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1323278   PMID:6289658   PMID:7642525   PMID:8043075   PMID:8144643   PMID:8626667   PMID:8889548   PMID:8999954   PMID:10349636   PMID:10536042   PMID:10725249   PMID:10922068  
PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12140190   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:14691545   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693   PMID:21052544   PMID:21873635   PMID:32554809   PMID:32714760   PMID:36233305  


Genomics

Comparative Map Data
Dpagt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39944,237,314 - 44,247,374 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl944,237,316 - 44,245,197 (+)EnsemblGRCm39 Ensembl
GRCm38944,325,857 - 44,333,895 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl944,326,019 - 44,333,900 (+)EnsemblGRCm38mm10GRCm38
MGSCv37944,134,928 - 44,141,683 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36944,077,840 - 44,084,595 (+)NCBIMGSCv36mm8
Celera941,581,588 - 41,588,325 (+)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map924.84NCBI
DPAGT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811119,093,874 - 119,101,853 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11119,096,025 - 119,108,331 (-)EnsemblGRCh38hg38GRCh38
GRCh3711118,967,220 - 118,972,563 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611118,472,423 - 118,477,995 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411118,472,422 - 118,477,995NCBI
Celera11116,124,628 - 116,130,198 (-)NCBICelera
Cytogenetic Map11q23.3NCBI
HuRef11114,906,662 - 114,912,231 (-)NCBIHuRef
CHM1_111118,853,515 - 118,859,087 (-)NCBICHM1_1
T2T-CHM13v2.011119,114,257 - 119,122,234 (-)NCBIT2T-CHM13v2.0
Dpagt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8853,560,869 - 53,567,625 (+)NCBIGRCr8
mRatBN7.2844,664,055 - 44,671,102 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl844,664,071 - 44,671,087 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx850,160,306 - 50,166,698 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0848,439,022 - 48,445,414 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0846,309,400 - 46,315,792 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0848,657,779 - 48,664,531 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl848,657,795 - 48,664,860 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0847,276,761 - 47,283,502 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,305,087 - 47,311,488NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera844,250,639 - 44,257,040 (+)NCBICelera
Cytogenetic Map8q22NCBI
Dpagt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541220,205,381 - 20,217,871 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541220,205,381 - 20,217,874 (-)NCBIChiLan1.0ChiLan1.0
DPAGT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29119,801,299 - 119,807,961 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111120,904,998 - 120,911,981 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011113,934,705 - 113,940,535 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111117,863,866 - 117,870,198 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11117,863,866 - 117,870,204 (-)Ensemblpanpan1.1panPan2
DPAGT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1514,760,518 - 14,765,306 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl514,760,784 - 14,764,967 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha514,813,227 - 14,818,301 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0514,703,570 - 14,708,640 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl514,704,093 - 14,708,640 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1514,841,611 - 14,846,682 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0514,745,627 - 14,750,704 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0514,786,006 - 14,791,077 (+)NCBIUU_Cfam_GSD_1.0
Dpagt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947101,127,692 - 101,133,021 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365424,048,979 - 4,054,105 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365424,049,107 - 4,054,100 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPAGT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl946,310,872 - 46,316,858 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1946,308,824 - 46,316,905 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2951,346,007 - 51,352,208 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DPAGT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11110,469,312 - 110,474,859 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1110,469,794 - 110,474,440 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604315,559,397 - 15,564,905 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dpagt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478414,478,276 - 14,483,763 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478414,478,276 - 14,483,814 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dpagt1
315 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:205
Count of miRNA genes:158
Interacting mature miRNAs:184
Transcripts:ENSMUST00000054708
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93673624349420511Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93694340650111140Mouse
1301007Pid2_mprion incubation determinant 2 (mouse)Not determined93715336244251323Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1558993Tdmq1_mtype 2 diabetes modifying QTL 1 (mouse)Not determined94041959451808670Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
11532693Sluc39_msusceptibility to lung cancer 39 (mouse)94064537448351476Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
12738415Lfibq8_mliver fibrosis QTL 8 (mouse)94140216245343743Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
13432191Actrse4_mactivity response to saline/ethanol 4 (mouse)94370321448603195Mouse

Markers in Region
BB138393  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38944,333,693 - 44,333,777UniSTSGRCm38
MGSCv37944,141,776 - 44,141,860UniSTSGRCm37
Celera941,588,418 - 41,588,502UniSTS
Cytogenetic Map9A5.2UniSTS
Whitehead/MRC_RH9490.11UniSTS
RH136449  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38944,333,270 - 44,333,474UniSTSGRCm38
MGSCv37944,141,353 - 44,141,557UniSTSGRCm37
Celera941,587,995 - 41,588,199UniSTS
Cytogenetic Map9A5.2UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001364464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC124577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM211613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM899494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN665943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U03603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X65603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000054708   ⟹   ENSMUSP00000056282
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl944,238,142 - 44,245,197 (+)Ensembl
GRCm38.p6 Ensembl944,326,845 - 44,333,900 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213461
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl944,237,861 - 44,243,314 (+)Ensembl
GRCm38.p6 Ensembl944,326,564 - 44,332,017 (+)Ensembl
RefSeq Acc Id: ENSMUST00000215050   ⟹   ENSMUSP00000150178
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl944,238,170 - 44,245,191 (+)Ensembl
GRCm38.p6 Ensembl944,326,873 - 44,333,894 (+)Ensembl
RefSeq Acc Id: ENSMUST00000215248   ⟹   ENSMUSP00000150465
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl944,237,316 - 44,240,373 (+)Ensembl
GRCm38.p6 Ensembl944,326,019 - 44,329,076 (+)Ensembl
RefSeq Acc Id: ENSMUST00000216327
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl944,237,848 - 44,241,183 (+)Ensembl
GRCm38.p6 Ensembl944,326,551 - 44,329,886 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217225
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl944,239,280 - 44,240,824 (+)Ensembl
GRCm38.p6 Ensembl944,327,983 - 44,329,527 (+)Ensembl
RefSeq Acc Id: NM_001364464   ⟹   NP_001351393
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39944,238,112 - 44,245,192 (+)NCBI
GRCm38944,326,815 - 44,333,895 (+)NCBI
Sequence:
RefSeq Acc Id: NM_007875   ⟹   NP_031901
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39944,238,112 - 44,245,192 (+)NCBI
GRCm38944,326,815 - 44,333,895 (+)NCBI
MGSCv37944,134,928 - 44,141,683 (+)RGD
Celera941,581,588 - 41,588,325 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509991   ⟹   XP_006510054
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39944,237,314 - 44,247,374 (+)NCBI
GRCm38944,326,017 - 44,333,606 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509992   ⟹   XP_006510055
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39944,237,741 - 44,247,374 (+)NCBI
GRCm38944,326,566 - 44,333,600 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509995   ⟹   XP_006510058
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39944,237,863 - 44,247,374 (+)NCBI
GRCm38944,326,557 - 44,333,606 (+)NCBI
Sequence:
RefSeq Acc Id: NP_031901   ⟸   NM_007875
- Peptide Label: isoform 1
- UniProtKB: Q921W5 (UniProtKB/Swiss-Prot),   P42867 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006510054   ⟸   XM_006509991
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006510058   ⟸   XM_006509995
- Peptide Label: isoform X3
- UniProtKB: Q9CPT1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510055   ⟸   XM_006509992
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001351393   ⟸   NM_001364464
- Peptide Label: isoform 2
- UniProtKB: Q9CPT1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000056282   ⟸   ENSMUST00000054708
RefSeq Acc Id: ENSMUSP00000150465   ⟸   ENSMUST00000215248
RefSeq Acc Id: ENSMUSP00000150178   ⟸   ENSMUST00000215050
Protein Domains
DPAGT1 insertion

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P42867-F1-model_v2 AlphaFold P42867 1-410 view protein structure

Promoters
RGD ID:6844440
Promoter ID:MM_KWN:57107
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_007875,   UC009PCV.1,   UC009PCX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36944,134,381 - 44,135,052 (+)MPROMDB
RGD ID:6849774
Promoter ID:EP59005
Type:single initiation site
Name:MM_GPT_1
Description:UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphatetransferase (GPT), DPAGT2 or GNPTA gene.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:alternative promoter #1 of 5; 5' exon 1; site 5.; see alsoEP59004  EP59003  EP59002  EP59001  
Tissues & Cell Lines:housekeeping gene
Experiment Methods:Primer extension with homologous sequence ladder
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv37944,134,400 - 44,134,460EPD
MGSCv36944,134,400 - 44,134,460EPD
RGD ID:6849776
Promoter ID:EP59004
Type:single initiation site
Name:MM_GPT_2
Description:UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphatetransferase (GPT), DPAGT2 or GNPTA gene.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Notes:homology_group=Homology group 233; Mouse GlcNAc-1-phosphate transferase
Alternative Promoters:alternative promoter #2 of 5; 5' exon 1; site 4.; see alsoEP59005  EP59003  EP59002  EP59001  
Tissues & Cell Lines:housekeeping gene
Experiment Methods:Primer extension with homologous sequence ladder
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv37944,134,714 - 44,134,774EPD
MGSCv36944,134,714 - 44,134,774EPD
RGD ID:6849778
Promoter ID:EP59003
Type:single initiation site
Name:MM_GPT_3
Description:UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphatetransferase (GPT), DPAGT2 or GNPTA gene.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:alternative promoter #3 of 5; 5' exon 1; site 3.; see alsoEP59005  EP59004  EP59002  EP59001  
Tissues & Cell Lines:housekeeping gene
Experiment Methods:Primer extension with homologous sequence ladder
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv37944,134,773 - 44,134,833EPD
MGSCv36944,134,773 - 44,134,833EPD
RGD ID:6849780
Promoter ID:EP59002
Type:single initiation site
Name:MM_GPT_4
Description:UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphatetransferase (GPT), DPAGT2 or GNPTA gene
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:alternative promoter #4 of 5; 5' exon 1; site 2.; see alsoEP59005  EP59004  EP59003  EP59001  
Tissues & Cell Lines:housekeeping gene
Experiment Methods:Primer extension with homologous sequence ladder
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv37944,134,807 - 44,134,867EPD
MGSCv36944,134,807 - 44,134,867EPD
RGD ID:8669368
Promoter ID:EPDNEW_M12715
Type:initiation region
Name:Dpagt1_1
Description:Mus musculus dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase1 (GlcNAc-1-P transferase) , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38944,326,848 - 44,326,908EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1196396 AgrOrtholog
Ensembl Genes ENSMUSG00000032123 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000054708 ENTREZGENE
  ENSMUST00000054708.5 UniProtKB/Swiss-Prot
  ENSMUST00000215050.2 UniProtKB/TrEMBL
  ENSMUST00000215248.2 UniProtKB/TrEMBL
InterPro DPAGT1_ins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glycosyl_transferase_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13478 UniProtKB/Swiss-Prot
MGD MGI:1196396 ENTREZGENE
NCBI Gene 13478 ENTREZGENE
PANTHER PTHR10571 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DPAGT1_ins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glycos_transf_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dpagt1 PhenoGen
UniProt A0A1L1ST50_MOUSE UniProtKB/TrEMBL
  A0A1L1STS5_MOUSE UniProtKB/TrEMBL
  GPT_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q921W5 ENTREZGENE
  Q9CPT1 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q921W5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-28 Dpagt1  dolichyl-phosphate N-acetylglucosaminephosphotransferase 1  Dpagt1  dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)  Symbol and/or name change 5135510 APPROVED