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Gene: DPAGT1 (dolichyl-phosphate N-acetylglucosaminephosphotransferase 1) Sus scrofa

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Symbol:

DPAGT1

Name:

dolichyl-phosphate N-acetylglucosaminephosphotransferase 1

RGD ID:

13848982

Description:

ENCODES a protein that exhibits glycosyltransferase activity (inferred); phosphotransferase activity, for other substituted phosphate groups (inferred); transferase activity (inferred); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (inferred); protein glycosylation (inferred); protein N-linked glycosylation (inferred); ASSOCIATED WITH acute intermittent porphyria (ortholog); acute porphyria (ortholog); CD3epsilon deficiency (ortholog); FOUND IN Golgi apparatus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	46,310,872 - 46,316,858 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	46,308,824 - 46,316,905 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	51,346,007 - 51,352,208 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DPAGT1	Pig	acute intermittent porphyria		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Acute intermittent porphyria \| ClinVar Annotator: match by term: PBGD more ...	ClinVar	PMID:18414213\|PMID:25741868\|PMID:28492532
DPAGT1	Pig	acute porphyria		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Acute Porphyria	ClinVar	PMID:18414213\|PMID:25741868\|PMID:28492532
DPAGT1	Pig	CD3epsilon deficiency		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: CD3epsilon deficiency	ClinVar	PMID:14602880\|PMID:15546002\|PMID:1635567\|PMID:17277165\|PMID:24216686\|PMID:24910257\|PMID:25373860\|PMID:26822028\|PMID:28492532\|PMID:8490660
DPAGT1	Pig	chromosome 11 partial duplication syndrome		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Distal trisomy 11q	ClinVar	PMID:25741868
DPAGT1	Pig	congenital disorder of glycosylation		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Carbohydrate-deficient glycoprotein syndrome \| ClinVar Annotator: match by term: Congenital more ...	ClinVar	PMID:12872255\|PMID:18414213\|PMID:22304930\|PMID:22742743\|PMID:23806237\|PMID:25741868\|PMID:28492532\|PMID:30117111\|PMID:31589614\|PMID:33743358
DPAGT1	Pig	congenital disorder of glycosylation Ij		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Congenital disorder of glycosylation type 1J	ClinVar	PMID:12872255\|PMID:16199547\|PMID:17576681\|PMID:18414213\|PMID:22304930\|PMID:22492991\|PMID:22742743\|PMID:22786653\|PMID:23249953\|PMID:23430862\|PMID:23591138\|PMID:23806237\|PMID:24033266\|PMID:24759841\|PMID:25326635\|PMID:25500013\|PMID:25741868\|PMID:26467025\|PMID:28454995\|PMID:28492532\|PMID:28662078\|PMID:28712839\|PMID:30117111\|PMID:30388443\|PMID:31127727\|PMID:31153949\|PMID:31589614\|PMID:33743358\|PMID:9536098
DPAGT1	Pig	congenital myasthenic syndrome 13		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Congenital myasthenic syndrome 13 \| ClinVar Annotator: match by term: more ...	ClinVar	PMID:12872255\|PMID:16199547\|PMID:17576681\|PMID:18414213\|PMID:22742743\|PMID:22786653\|PMID:23249953\|PMID:23430862\|PMID:23591138\|PMID:23806237\|PMID:24033266\|PMID:24759841\|PMID:25500013\|PMID:25741868\|PMID:26467025\|PMID:28454995\|PMID:28492532\|PMID:28662078\|PMID:28712839\|PMID:30117111\|PMID:30388443\|PMID:31127727\|PMID:31153949\|PMID:31589614\|PMID:33743358\|PMID:9536098
DPAGT1	Pig	Dwarfism		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Short stature	ClinVar	PMID:32581362
DPAGT1	Pig	Familial Atrial Fibrillation 14		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Atrial fibrillation, familial, 14	ClinVar	PMID:28492532
DPAGT1	Pig	genetic disease		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:17576681\|PMID:22742743\|PMID:23806237\|PMID:25741868\|PMID:26467025\|PMID:28492532\|PMID:30117111\|PMID:31589614\|PMID:33743358\|PMID:9536098
DPAGT1	Pig	glycogen storage disease Ib		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Glucose-6-phosphate transport defect	ClinVar	PMID:28492532
DPAGT1	Pig	immunodeficiency 17		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Immunodeficiency 17 \| ClinVar Annotator: match by term: Immunodeficiency 17, more ...	ClinVar	PMID:14602880\|PMID:15546002\|PMID:1635567\|PMID:17277165\|PMID:24216686\|PMID:24910257\|PMID:25373860\|PMID:26822028\|PMID:28492532\|PMID:8490660
DPAGT1	Pig	immunodeficiency 18		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Immunodeficiency 18	ClinVar	PMID:14602880\|PMID:15546002\|PMID:1635567\|PMID:17277165\|PMID:24216686\|PMID:24910257\|PMID:25373860\|PMID:26822028\|PMID:28492532\|PMID:8490660
DPAGT1	Pig	immunodeficiency 19		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Immunodeficiency 19	ClinVar	PMID:14602880\|PMID:15546002\|PMID:1635567\|PMID:17277165\|PMID:24216686\|PMID:24910257\|PMID:25373860\|PMID:26822028\|PMID:28492532\|PMID:8490660
DPAGT1	Pig	inflammatory bowel disease 28		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Inflammatory bowel disease 28	ClinVar	PMID:14602880\|PMID:15546002\|PMID:1635567\|PMID:17277165\|PMID:24216686\|PMID:24910257\|PMID:25373860\|PMID:26822028\|PMID:28492532\|PMID:8490660
DPAGT1	Pig	isolated microphthalmia 5		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Isolated microphthalmia 5	ClinVar	PMID:28492532
DPAGT1	Pig	long QT syndrome 10		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Long QT syndrome 10	ClinVar	PMID:28492532
DPAGT1	Pig	RASopathy		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: RASopathy	ClinVar	PMID:22742743\|PMID:28492532
DPAGT1	Pig	schizophrenia		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Schizophrenia	ClinVar	PMID:21681106\|PMID:30208311
DPAGT1	Pig	Tubular Aggregate Myopathies		ISO	RGD:1349923	8554872	ClinVar Annotator: match by term: Myopathy with tubular aggregates	ClinVar	PMID:25741868\|PMID:38124360

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DPAGT1	Pig	Colorectal Neoplasms		ISO	RGD:1349923	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:25944804
DPAGT1	Pig	congenital myasthenic syndrome		ISO	RGD:1349923	9068941	CTD Direct Evidence: marker/mechanism	CTD
DPAGT1	Pig	Disease Progression		ISO	RGD:1349923	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21364753
DPAGT1	Pig	Stomach Neoplasms		ISO	RGD:1349923	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21364753

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DPAGT1	Pig	congenital disorder of glycosylation Ij		ISO	RGD:1349923	7240710		OMIM
DPAGT1	Pig	congenital myasthenic syndrome 13		ISO	RGD:1349923	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DPAGT1	Pig	dolichol-linked oligosaccharide biosynthetic process	involved_in	IEA	InterPro:IPR033895	150520179		InterPro	GO_REF:0000002
DPAGT1	Pig	dolichol-linked oligosaccharide biosynthetic process	involved_in	IEA	UniProtKB:Q9H3H5\|ensembl:ENSP00000346142	150520179		Ensembl	GO_REF:0000107
DPAGT1	Pig	protein glycosylation	involved_in	IEA	UniPathway:UPA00378	150520179		UniProt	GO_REF:0000041
DPAGT1	Pig	protein N-linked glycosylation	involved_in	IEA	UniProtKB:Q9H3H5\|ensembl:ENSP00000346142	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DPAGT1	Pig	endoplasmic reticulum	located_in	IEA	UniProtKB-KW:KW-0256	150520179		UniProt	GO_REF:0000043
DPAGT1	Pig	endoplasmic reticulum membrane	located_in	IEA	UniProtKB-SubCell:SL-0097	150520179		UniProt	GO_REF:0000044
DPAGT1	Pig	Golgi apparatus	is_active_in	ISO	UniProtKB:Q8BH26	9068941	PMID:36074821	MGI	PMID:36074821
DPAGT1	Pig	membrane	located_in	IEA	UniProtKB:Q9H3H5\|ensembl:ENSP00000346142	150520179		Ensembl	GO_REF:0000107
DPAGT1	Pig	membrane	is_active_in	IBA	PANTHER:PTN000060284\|PomBase:SPBC15D4.04\|SGD:S000000447\|UniProtKB:Q5EA65\|UniProtKB:Q9H3H5	150520179		GO_Central	GO_REF:0000033
DPAGT1	Pig	membrane	located_in	IEA	InterPro:IPR000715	150520179		InterPro	GO_REF:0000002
DPAGT1	Pig	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
DPAGT1	Pig	membrane	located_in	IEA	ARBA:ARBA00028763	150520179		UniProt	GO_REF:0000117

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DPAGT1	Pig	glycosyltransferase activity	enables	IEA	UniProtKB-KW:KW-0328	150520179		UniProt	GO_REF:0000043
DPAGT1	Pig	phosphotransferase activity, for other substituted phosphate groups	enables	IEA	InterPro:IPR000715	150520179		InterPro	GO_REF:0000002
DPAGT1	Pig	protein binding	enables	ISO	UniProtKB:P42858	9068941	PMID:32814053	IntAct	PMID:32814053
DPAGT1	Pig	protein binding	enables	ISO	UniProtKB:Q8BH26	9068941	PMID:36074821	MGI	PMID:36074821
DPAGT1	Pig	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	150520179		UniProt	GO_REF:0000043
DPAGT1	Pig	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	enables	IEA	InterPro:IPR033895	150520179		InterPro	GO_REF:0000002
DPAGT1	Pig	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	enables	IBA	MGI:1196396\|PANTHER:PTN000060284\|PomBase:SPBC15D4.04\|SGD:S000000447\|TAIR:locus:2060555\|TAIR:locus:2082603\|UniProtKB:Q5EA65\|UniProtKB:Q9H3H5	150520179		GO_Central	GO_REF:0000033
DPAGT1	Pig	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	enables	IEA	ARBA:ARBA00026931	150520179		UniProt	GO_REF:0000117
DPAGT1	Pig	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	enables	IEA	EC:2.7.8.15	150520179		UniProt	GO_REF:0000003
DPAGT1	Pig	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	enables	IEA	UniProtKB:P42867\|UniProtKB:Q9H3H5\|ensembl:ENSMUSP00000056282\|ensembl:ENSP00000346142	150520179		Ensembl	GO_REF:0000107
DPAGT1	Pig	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	enables	IEA	UniProtKB:Q9H3H5\|ensembl:ENSP00000346142	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

DPAGT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	46,310,872 - 46,316,858 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	46,308,824 - 46,316,905 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	51,346,007 - 51,352,208 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DPAGT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	119,093,874 - 119,101,853 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	119,096,025 - 119,108,331 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	118,967,220 - 118,972,563 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	118,472,423 - 118,477,995 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	118,472,422 - 118,477,995	NCBI
Celera	11	116,124,628 - 116,130,198 (-)	NCBI		Celera
Cytogenetic Map	11	q23.3	NCBI
HuRef	11	114,906,662 - 114,912,231 (-)	NCBI		HuRef
CHM1_1	11	118,853,515 - 118,859,087 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	119,114,257 - 119,122,234 (-)	NCBI		T2T-CHM13v2.0

Dpagt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	44,237,314 - 44,247,374 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	44,237,316 - 44,245,197 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	44,325,857 - 44,333,895 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	44,326,019 - 44,333,900 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	44,134,928 - 44,141,683 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	44,077,840 - 44,084,595 (+)	NCBI		MGSCv36	mm8
Celera	9	41,581,588 - 41,588,325 (+)	NCBI		Celera
Cytogenetic Map	9	A5.2	NCBI
cM Map	9	24.84	NCBI

Dpagt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	53,560,869 - 53,567,625 (+)	NCBI		GRCr8
mRatBN7.2	8	44,664,055 - 44,671,102 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	44,664,071 - 44,671,087 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	50,160,306 - 50,166,698 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	48,439,022 - 48,445,414 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	46,309,400 - 46,315,792 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	48,657,779 - 48,664,531 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	48,657,795 - 48,664,860 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	47,276,761 - 47,283,502 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	47,305,087 - 47,311,488	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	44,250,639 - 44,257,040 (+)	NCBI		Celera
Cytogenetic Map	8	q22	NCBI

Dpagt1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	20,205,381 - 20,217,871 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	20,205,381 - 20,217,874 (-)	NCBI	ChiLan1.0	ChiLan1.0

DPAGT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	119,801,299 - 119,807,961 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	120,904,998 - 120,911,981 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	113,934,705 - 113,940,535 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	117,863,866 - 117,870,198 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	117,863,866 - 117,870,204 (-)	Ensembl	panpan1.1		panPan2

DPAGT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	14,760,518 - 14,765,306 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	14,760,784 - 14,764,967 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	14,813,227 - 14,818,301 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	14,703,570 - 14,708,640 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	14,704,093 - 14,708,640 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	14,841,611 - 14,846,682 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	14,745,627 - 14,750,704 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	14,786,006 - 14,791,077 (+)	NCBI		UU_Cfam_GSD_1.0

Dpagt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	101,127,692 - 101,133,021 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	4,048,979 - 4,054,105 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	4,049,107 - 4,054,100 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DPAGT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	110,469,312 - 110,474,859 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	110,469,794 - 110,474,440 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	15,559,397 - 15,564,905 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dpagt1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	14,478,276 - 14,483,763 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624784	14,478,276 - 14,483,814 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in DPAGT1
182 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3


RefSeq Transcripts	XM_003129927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK392247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU639481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01079881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000016476 ⟹ ENSSSCP00000016033

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	46,310,877 - 46,316,858 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000103127 ⟹ ENSSSCP00000078582

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	46,310,872 - 46,316,673 (-)	Ensembl

RefSeq Acc Id:

XM_003129927 ⟹ XP_003129975

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	46,308,824 - 46,316,905 (-)	NCBI

Sequence:

show sequence

AGTTGCTCTGCTAACTAGACCCGGGCGGAAACAGTAAGTAGGTAGATGCAGTGAGGCAGAACCAAGGTTGACTTTACTGAGGCTCCTGAGAGTTCCCAGGGCGGCTCAGGTTGGAGTTGTTGGTTTTG
CTCAGGCCAGTGTCGGAAAACTCAGCCTGTGGGGAGCGGCCACTTCTTACTGCTAGGGACCGTTAGCTAAGGAGGCGGCCGAGAGGGCCGCCTGGCCAGTTACCATGTGGGCCTTCCCGGAGTTGCCG
ATGCCGCTGTTGGTGAATTTGATCGGCTCGCTGCTGGGATTTGTGGCCACACTCACCCTCATCCCTGCCTTCCGTGGCCACTTCATCGCCGCGCGTCTCTGCGGCCAGGATCTCAACAAATCCAACCG
GCAGCAAATCCCAGAATCCCAGGGAGTGATCAGCGGTGCTGTTTTCCTTATCATCCTCTTCTGCTTCATCCCTTTCCCTTTCCTGAACTGCTTTGTGGAGGAGCACTGTAAAGCCTTCCCCCACCATG
AATTTGTGGCCCTGATAGGTGCGCTCCTTGCCATCTGCTGCATGATTTTCCTGGGCTTCGCGGATGATGTTTTGAATCTGCGCTGGCGCCATAAGCTGCTGCTGCCCACAGCTGCCTCACTACCTCTC
CTCATGGTCTATTTCACCAACTTTGGCAACACGACCATCGTGGTACCCAAGCCCTTCCGCCCAATTCTTGGCCTGCATCTGGACTTGGGAATCCTGTACTATGTCTACATGGGGCTGCTGGCAGTGTT
CTGTACCAATGCCATCAATATTCTAGCAGGAATTAATGGCCTAGAGGCTGGCCAGTCGCTAGTCATTTCTGCTTCCATCATTGTCTTCAACCTGGTAGAGCTGGAAGGTGATTATCGGGATGATCACG
TCTTTTCCCTCTACTTCATGATACCTTTTTTCTTCACCACTTTGGGATTGCTCTACCATAACTGGTACCCATCCCGGGTGTTTGTGGGAGATACCTTCTGCTACTTTGCTGGCATGACCTTTGCCGTG
GTGGGCATCTTGGGACACTTCAGCAAGACTATGCTACTCTTCTTCATGCCTCAGGTGTTCAACTTCCTCTACTCACTGCCTCAGCTCCTGCATATCATCCCCTGCCCGCGCCACCGTATGCCCAGACT
CAATACCAAGACAGGCAAACTGGAGATGAGCTATTCCAAGTTCAAGACCAAGAGCCTCTCTTTCTTGGGCACCTTTATTCTAAAGGTAGCAGAGAGCCTCCGGCTAGTGACCGTGCGCCAGAGTGAGA
ATGAGGATGGTGCCTTCACAGAGTGTAACAACATGACCCTCATCAACTTGCTACTCAAAGTCTTTGGGCCCATGCATGAGAGAAATCTCACCCTGTTCCTGCTACTGCTGCAGGTCGTGGGCAGTGCT
GTCACCTTCTCCATTCGTTACCAGCTTGTCCGACTCTTCTATGATGTCTGAGTCGCCTAATCATTGCCTTTTGCTTCATAACCACTAGGGTCCCTGACTCAGGCTCAGCTCTTCTGGACCAAGACTGC
CTCCTGGTCCAAGCCTCTCCCACCCTTCATTCTCCAGATTTTGTCCTCAGCATTTCCTTTCCCCTATGATTATTGACATCCTTGGGCCTTTCTTGCCCTCTAGGGCTGTTGATTGAACTTTGCTTATG
GCTTTCTTCAACTTGCCACTCTCCCTCTCCATCCCACTTTTGCAGCCACCTAAGCAGGGAATACTGTAGCTTTTATGCAGTTACCCACAACTCTGACACTCAAGGAATATGCTGGGCCTGGGGATAGA
ACCCTGGCTGCGGATAGGGTCACAGGCTTGAGGATGACTTGACATTTGACTATAATTAAGTATTCTGATGATTCAGAGCAGACTGGGGGGCCAGGTGCTCCCAGTGGCAACAATAAAAAGTTGTTTTT
TCTTGTTGTTTCTGTAGGTGTATTTCCTATGTGGGCATTTTAAGGTAGATTGGGAGTGTTGGTGGAGGCATTTCCTCTAAGAGTTTGCCTATCTCTCTGCCTCATCCTTTTTCTTTCAGTACCTCAGG
CCACTTCTAGCAAGAAGTGAACACAAAGAACAAACCAGGTAGAACATGTTGAGTAAATACTGAAATCCTGCTGCTCCGTGGCGTAGAGAGCCATAAGATTGGCATTATCTGGTATGGGGTCGAACTTG
CAGAGGGTCTCTAATTCCTTCCCTTTTTCATGCCTTTTTTGCCAGATAGGAGGGCGTGACCAGACCTGGGAAGTGAGGCAGAGTAGTCAGTAGTGCTGACCCCTTTTCTTTAAAAACCTTAAGTCCCA
CACACATTTCCCTGAGATGGCTTCAGACCTCACTGTCTATGTCTTCCGGTTCTGGAGTAGGGCTGTAGTGTTTAAATCTGGCGCGCTTCACATGGATTGGCTACACCGGAGAGTGGTTTGCTGTGGGC
TCGCTGCAGCTCCTCCTCGCCTCTTTCCCCGGGCAGAAGGTTTTCAAATTCTACCAATCGGAGGGCGCGTTCTCTCAGCCGGGGCGCGCCACCGATTGGTTAACTGCAGCCAACCGGAGGCGGGTATT
AAAGAAAAGAGCCAATCAGGAGGGCGCGGGGGTGTGCCCTGGGGGGCTTATAAGGGCGGCTTCTGGGCGCGCGCGGCACCAGTTGGACTGCGGCGGCGGCTGTTTTTCGTCCCTGCGAGGCGTTCTCC
TCAACGTACATCTACCTCACGCAGCATGTCGGGCCGCGGCAAGACCGGCGGCAAGGCCCGCGCCAAGGCCAAGTCTCGCTCATCACGCGCCGGCCTCCAGTTCCCGGTGGGCCGCGTGCACCGCCTGC
TGCGCAAGGGCCACTATGCCGAGCGAGTGGGCGCCGGCGCGCCAGTCTACCTGGCGGCGGTGCTCGAGTACCTCACCGCCGAGATCCTGGAGCTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACG
CGGATCATCCCTCGCCACCTGCAGTTGGCCATCCGCAACGACGAGGAGCTCAACAAGCTGCTGGGCGGCGTGACGATCGCCCAGGGAGGCGTCCTGCCCAATATCCAGGCCGTGTTGCTGCCCAAGAA
GACCAGCGCCACCGTGGGGCCGAAGGCGCCCGCCGGCGGCAAGAAGGCCACCCAGGCCTCGCAGGAGTACTGAGGCCGCCTGCGCCGCCACGGCCGCCGCCCGGTCTTCCCTTCGCCACCACAAAGGC
CCTTTTAAGGGCCACCACAGCCCTCACGGAAAGAGCTGGGCCACGACGGGCTCCCGGCCGCGCGCTCGCCCCCTCCCCAGCCTCGCCGCCGCCGCCGCCGCCTGCCCGCCCCTCCCCCGCGCGGCCCG
CTCCCGCTGTGGCTCCGCCGAGGACGGCCGTTTGAAAGCCGCTCGGCCCCGGGGTCCAGCTCGTGACTGCTGGCCTGGCCGCAGACGCTGATGGGCTGCGGGGAGGACGCGGCGCCTAATGGAAGGCT
GGGCCGGCCGTGCTGACGCAGGGCCGGGGAGCGCGGCGGGAAGGTGAGTGGGTGCAGAGGCCGCCGGCGGGGCCGCGCGCGTTACTCTCCAGCCCGTTGCTCCGGCCGCGACTTCAGACGGAACTCGA
TTTCGGGCGGCGGCGGAGTCGGTCACATTTGTTCCGGGGCCCCTTTGCTGCCGGGTCCCGGGCCTTGCACGTCCGCGCTCCCTCCATCTCCGCTCGCAGGCCCGTGCGCGTCCGGACGAGACACTTGG
CGGTGTGAGCGTCTCCCGCGGTGGCCGGTCCGGGCGGGGTGGGGGCCGCGCCCCCAGGCCCGCTCCCCTCCCGGCGGGCCCACTGGGCAAGCCAAGCACCTAGATACCAGCACTACTAGTCCATTAAC
CCCCGTCTGGACTGAGCCGCCGTTGGCTTCGGAACTGGAATTTTGCAGCTAACCCATCCGAGACTAGTACTTTAGATATTGGGGAGTTTCAGATGGACTAATTTTGTTTATTAAAGGATTGGTTTTTA
TATATA

hide sequence


Protein RefSeqs	XP_003129975	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000016033
	ENSSSCP00000016033.2
	ENSSSCP00000078582.1
	ENSSSCP00015011393.1
	ENSSSCP00025009167.1
	ENSSSCP00030034954.1
	ENSSSCP00035009203.1
	ENSSSCP00040042260.1
	ENSSSCP00045044144.1
	ENSSSCP00050021489.1
	ENSSSCP00055045247.1
	ENSSSCP00060011944.1
	ENSSSCP00065048526.1
	ENSSSCP00070001062.1

RefSeq Acc Id:

XP_003129975 ⟸ XM_003129927

- UniProtKB:

F1SAH5 (UniProtKB/TrEMBL), A0A4X1SFQ6 (UniProtKB/TrEMBL), A0A8D1UNA2 (UniProtKB/TrEMBL), A0A8D0XE71 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MWAFPELPMPLLVNLIGSLLGFVATLTLIPAFRGHFIAARLCGQDLNKSNRQQIPESQGVISGAVFLIILFCFIPFPFLNCFVEEHCKAFPHHEFVALIGALLAICCMIFLGFADDVLNLRWRHKLLL
PTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVISASIIVFNLVELEGDYRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCY
FAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRMPRLNTKTGKLEMSYSKFKTKSLSFLGTFILKVAESLRLVTVRQSENEDGAFTECNNMTLINLLLKVFGPMHERNLTLFLL
LLQVVGSAVTFSIRYQLVRLFYDV

hide sequence

Ensembl Acc Id:

ENSSSCP00000016033 ⟸ ENSSSCT00000016476

Ensembl Acc Id:

ENSSSCP00000078582 ⟸ ENSSSCT00000103127

Protein Domains

DPAGT1 insertion

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000015110	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015021880	UniProtKB/TrEMBL
	ENSSSCG00025016485	UniProtKB/TrEMBL
	ENSSSCG00030054984	UniProtKB/TrEMBL
	ENSSSCG00035018949	UniProtKB/TrEMBL
	ENSSSCG00040069568	UniProtKB/TrEMBL
	ENSSSCG00045036381	UniProtKB/TrEMBL
	ENSSSCG00050037976	UniProtKB/TrEMBL
	ENSSSCG00055028543	UniProtKB/TrEMBL
	ENSSSCG00060020594	UniProtKB/TrEMBL
	ENSSSCG00065078316	UniProtKB/TrEMBL
	ENSSSCG00070000631	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000016476	ENTREZGENE
	ENSSSCT00000016476.5	UniProtKB/TrEMBL
	ENSSSCT00000103127.1	UniProtKB/TrEMBL
	ENSSSCT00015028963.1	UniProtKB/TrEMBL
	ENSSSCT00025022170.1	UniProtKB/TrEMBL
	ENSSSCT00030076598.1	UniProtKB/TrEMBL
	ENSSSCT00035024506.1	UniProtKB/TrEMBL
	ENSSSCT00040095394.1	UniProtKB/TrEMBL
	ENSSSCT00045062645.1	UniProtKB/TrEMBL
	ENSSSCT00050051217.1	UniProtKB/TrEMBL
	ENSSSCT00055056604.1	UniProtKB/TrEMBL
	ENSSSCT00060027907.1	UniProtKB/TrEMBL
	ENSSSCT00065108501.1	UniProtKB/TrEMBL
	ENSSSCT00070001211.1	UniProtKB/TrEMBL
InterPro	DPAGT1_ins	UniProtKB/TrEMBL
	Glycosyl_transferase_4	UniProtKB/TrEMBL
	GPT	UniProtKB/TrEMBL
KEGG Report	ssc:100517773	UniProtKB/TrEMBL
NCBI Gene	DPAGT1	ENTREZGENE
PANTHER	PTHR10571	UniProtKB/TrEMBL
	UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE	UniProtKB/TrEMBL
Pfam	DPAGT1_ins	UniProtKB/TrEMBL
	Glycos_transf_4	UniProtKB/TrEMBL
UniProt	A0A4X1SFQ6	ENTREZGENE
	A0A8D0XE71	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1UNA2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FH66_PIG	UniProtKB/TrEMBL
	F1SAH5	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1SFQ6	UniProtKB/TrEMBL
VGNC ID	VGNC:87411	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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