Pde4dip (phosphodiesterase 4D interacting protein (myomegalin)) - Rat Genome Database

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Gene: Pde4dip (phosphodiesterase 4D interacting protein (myomegalin)) Mus musculus
Analyze
Symbol: Pde4dip
Name: phosphodiesterase 4D interacting protein (myomegalin)
RGD ID: 1620696
MGI Page MGI
Description: Predicted to enable enzyme binding activity and molecular adaptor activity. Predicted to be involved in microtubule cytoskeleton organization; protein-containing complex assembly; and regulation of organelle organization. Predicted to be located in myofibril and nucleus. Predicted to be active in Golgi apparatus and centrosome. Predicted to colocalize with cortical microtubule plus-end. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human PDE4DIP (phosphodiesterase 4D interacting protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4732458A06Rik; 9430063L05Rik; C87016; D130016K21Rik; D3Bwg1078e; KIAA0477; MGC176146; mKIAA0454; myomegalin; phosphodiesterase 4D-interacting protein; upregulated during skeletal muscle growth 4; Usmg; Usmg4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39397,597,144 - 97,796,023 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl397,597,140 - 97,796,023 (-)EnsemblGRCm39 Ensembl
GRCm38397,689,828 - 97,888,707 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl397,689,824 - 97,888,707 (-)EnsemblGRCm38mm10GRCm38
MGSCv37397,493,751 - 97,692,630 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36397,775,233 - 97,974,112 (-)NCBIMGSCv36mm8
Celera399,089,670 - 99,287,699 (-)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map342.28NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde4dipMousecataract 46 juvenile-onset  ISOPDE4DIP (Homo sapiens)8554872ClinVar Annotator: match by term: Cataract 46 juvenile-onsetClinVarPMID:29464339 and PMID:31690835
Pde4dipMousegastrointestinal stromal tumor  ISOPDE4DIP (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
Pde4dipMouseparathyroid carcinoma  ISOPDE4DIP (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532
Pde4dipMouseschizophrenia  ISOPDE4DIP (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde4dipMouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of PDE4DIP mRNACTDPMID:36331819
Pde4dipMouse1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde4dipMouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of PDE4DIP mRNACTDPMID:22206623
Pde4dipMouse1,2-dimethylhydrazine increases expressionEXP 64804641 and 2-Dimethylhydrazine results in increased expression of PDE4DIP mRNACTDPMID:22206623
Pde4dipMouse1,3-dinitrobenzene decreases expressionISOPde4dip (Rattus norvegicus)64804643-dinitrobenzene results in decreased expression of PDE4DIP mRNACTDPMID:21983209
Pde4dipMouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PDE4DIP mRNACTDPMID:17942748
Pde4dipMouse17beta-estradiol decreases expressionISOPde4dip (Rattus norvegicus)6480464Estradiol results in decreased expression of PDE4DIP mRNACTDPMID:32145629
Pde4dipMouse17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of PDE4DIP mRNACTDPMID:39298647
Pde4dipMouse2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde4dipMouse2,2',5,5'-tetrachlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde4dipMouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PDE4DIP mRNACTDPMID:17942748
Pde4dipMouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of PDE4DIP mRNACTDPMID:21570461
Pde4dipMouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPde4dip (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of PDE4DIP mRNACTDPMID:21215274
Pde4dipMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of PDE4DIP mRNACTDPMID:19465110
Pde4dipMouse2,4,4'-trichlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde4dipMouse2,6-dinitrotoluene affects expressionISOPde4dip (Rattus norvegicus)64804642 and 6-dinitrotoluene affects the expression of PDE4DIP mRNACTDPMID:21346803
Pde4dipMouse3,3',4,4'-tetrachlorobiphenyl multiple interactionsEXP 64804643 more ...CTDPMID:19467301
Pde4dipMouse3-chloropropane-1,2-diol increases expressionISOPde4dip (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of PDE4DIP proteinCTDPMID:34915118
Pde4dipMouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOPDE4DIP (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of PDE4DIP mRNACTDPMID:28628672
Pde4dipMouse4,4'-sulfonyldiphenol decreases expressionEXP 6480464bisphenol S results in decreased expression of PDE4DIP mRNACTDPMID:39298647

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Biological Process
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Cellular Component
1 to 17 of 17 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde4dipMousecentrosome located_inISSUniProtKB:Q9WUJ32290270 PMID:11134006UniProtPMID:11134006
Pde4dipMousecentrosome located_inISOUniProtKB:Q5VU432290270 GO_CentralGO_REF:0000119
Pde4dipMousecentrosome is_active_inIBAPANTHER:PTN005307648 more ...2290270 GO_CentralGO_REF:0000033
Pde4dipMousecentrosome located_inISOPde4dip (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Pde4dipMousecentrosome  ISOPde4dip (Rattus norvegicus)9068941 RGDPMID:11134006 and REF_RGD_ID:1299425
Pde4dipMousecortical microtubule plus-end located_inISOUniProtKB:Q5VU432290270 GO_CentralGO_REF:0000119
Pde4dipMousecytoplasm located_inISOUniProtKB:Q5VU432290270 GO_CentralGO_REF:0000119
Pde4dipMousecytoplasm located_inISSUniProtKB:Q5VU432290270 UniProtGO_REF:0000024
Pde4dipMouseGolgi apparatus located_inISSUniProtKB:Q5VU432290270 UniProtGO_REF:0000024
Pde4dipMouseGolgi apparatus located_inISSUniProtKB:Q9WUJ32290270 PMID:11134006UniProtPMID:11134006
Pde4dipMouseGolgi apparatus is_active_inIBAPANTHER:PTN005307648 and UniProtKB:Q5VU432290270 GO_CentralGO_REF:0000033
Pde4dipMouseGolgi apparatus located_inISOUniProtKB:Q5VU432290270 GO_CentralGO_REF:0000119
Pde4dipMousemyofibril  ISOPde4dip (Rattus norvegicus)9068941 RGDPMID:11134006 and REF_RGD_ID:1299425
Pde4dipMousemyofibril located_inISSUniProtKB:Q9WUJ32290270 PMID:11134006UniProtPMID:11134006
Pde4dipMousemyofibril located_inISOPde4dip (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Pde4dipMousenucleus located_inISOUniProtKB:Q5VU432290270 GO_CentralGO_REF:0000119
Pde4dipMousenucleus located_inISSUniProtKB:Q5VU432290270 UniProtGO_REF:0000024
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Molecular Function

  


#
Reference Title
Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:9371744   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11134006   PMID:11217851   PMID:12176734   PMID:12466305   PMID:12466851  
PMID:12477932   PMID:12693553   PMID:14681479   PMID:14691545   PMID:15226823   PMID:15747579   PMID:16141072   PMID:16141073   PMID:17920017   PMID:17953485   PMID:18799476   PMID:18799693  
PMID:21267068   PMID:21677750   PMID:21767579   PMID:21873635   PMID:24194600   PMID:25308000   PMID:27113764   PMID:28671696   PMID:32325033   PMID:35860864   PMID:36417873   PMID:36604605  
PMID:37142655   PMID:38355793  



Pde4dip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39397,597,144 - 97,796,023 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl397,597,140 - 97,796,023 (-)EnsemblGRCm39 Ensembl
GRCm38397,689,828 - 97,888,707 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl397,689,824 - 97,888,707 (-)EnsemblGRCm38mm10GRCm38
MGSCv37397,493,751 - 97,692,630 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36397,775,233 - 97,974,112 (-)NCBIMGSCv36mm8
Celera399,089,670 - 99,287,699 (-)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map342.28NCBI
PDE4DIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381148,808,434 - 149,033,016 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1148,808,140 - 149,048,286 (+)EnsemblGRCh38hg38GRCh38
GRCh371144,851,427 - 145,075,933 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361143,562,784 - 143,787,436 (-)NCBINCBI36Build 36hg18NCBI36
Build 341142,440,804 - 142,565,067NCBI
Celera1121,506,245 - 121,526,690 (+)NCBICelera
Cytogenetic Map1q21.2NCBI
HuRef1119,290,177 - 119,290,733 (-)NCBIHuRef
HuRef1119,196,278 - 119,206,613 (-)NCBIHuRef
HuRef1119,235,190 - 119,235,681 (-)NCBIHuRef
HuRef1119,153,319 - 119,162,328 (-)NCBIHuRef
HuRef1119,142,103 - 119,150,668 (-)NCBIHuRef
HuRef1119,165,611 - 119,191,824 (-)ENTREZGENEHuRef
HuRef1119,268,039 - 119,268,444 (-)NCBIHuRef
CHM1_11150,176,307 - 150,401,145 (+)NCBICHM1_1
T2T-CHM13v2.01145,475,230 - 145,700,086 (+)NCBIT2T-CHM13v2.0
Pde4dip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82187,982,002 - 188,178,937 (-)NCBIGRCr8
mRatBN7.22185,293,236 - 185,490,100 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2185,293,214 - 185,468,379 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2192,940,676 - 193,137,388 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02190,749,615 - 190,945,831 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02185,573,289 - 185,769,975 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02199,867,965 - 200,066,034 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2199,867,972 - 200,003,443 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02219,345,687 - 219,479,200 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42192,534,747 - 192,671,053 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12192,497,500 - 192,633,807 (-)NCBI
Celera2177,786,301 - 177,918,988 (-)NCBICelera
Cytogenetic Map2q34NCBI
Pde4dip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555681,322,470 - 1,546,256 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555681,321,053 - 1,546,351 (-)NCBIChiLan1.0ChiLan1.0
LOC100977296
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21102,698,937 - 102,705,916 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11102,273,207 - 102,294,457 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01122,445,609 - 122,452,842 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11113,064,912 - 113,084,501 (+)NCBIpanpan1.1PanPan1.1panPan2
PDE4DIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11757,135,716 - 57,359,348 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1757,135,308 - 57,358,978 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1756,773,133 - 56,996,596 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01758,127,352 - 58,351,715 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11757,038,235 - 57,262,228 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01757,074,929 - 57,298,766 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01757,722,757 - 57,947,007 (+)NCBIUU_Cfam_GSD_1.0
LOC100624559
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4100,646,935 - 100,863,250 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14100,646,939 - 100,863,353 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PDE4DIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366603814,282,358 - 14,312,135 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Variants in Pde4dip
11681 total Variants

Predicted Target Of
Summary Value
Count of predictions:3601
Count of miRNA genes:941
Interacting mature miRNAs:1356
Transcripts:ENSMUST00000045243, ENSMUST00000090750, ENSMUST00000107038, ENSMUST00000163531, ENSMUST00000168438, ENSMUST00000175751
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
1301398Rapop3_mradiation-induced apoptosis 3 (mouse)Not determined390511217100464137Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse

1 to 10 of 43 rows
D3Mit233  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,798,558 - 97,798,846UniSTSGRCm38
MGSCv37397,602,481 - 97,602,769UniSTSGRCm37
Celera399,198,107 - 99,198,395UniSTS
Cytogenetic Map3F2.2UniSTS
cM Map347.0UniSTS
Whitehead Genetic335.0UniSTS
Whitehead/MRC_RH31112.91UniSTS
Whitehead_YAC3 UniSTS
D3Mit41  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,791,322 - 97,791,530UniSTSGRCm38
MGSCv37397,595,245 - 97,595,453UniSTSGRCm37
Celera399,190,871 - 99,191,079UniSTS
Cytogenetic Map3F2.2UniSTS
cM Map347.0UniSTS
Whitehead Genetic335.0UniSTS
Whitehead/MRC_RH31111.2UniSTS
Whitehead_YAC3 UniSTS
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
RH125170  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,689,870 - 97,689,989UniSTSGRCm38
MGSCv37397,493,793 - 97,493,912UniSTSGRCm37
Celera399,089,712 - 99,089,831UniSTS
Cytogenetic Map3F2.2UniSTS
Pde4dip  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3F2.2UniSTS
D3Bwg1078e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,689,899 - 97,690,057UniSTSGRCm38
MGSCv37397,493,822 - 97,493,980UniSTSGRCm37
Celera399,089,741 - 99,089,899UniSTS
Cytogenetic Map3F2.2UniSTS
cM Map351.5UniSTS






1 to 30 of 47 rows
RefSeq Transcripts NM_001039376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001289701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001289702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_110360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA727946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC130541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ290946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB636676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC033477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 47 rows

Ensembl Acc Id: ENSMUST00000045243   ⟹   ENSMUSP00000040905
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,646,170 - 97,675,325 (-)Ensembl
GRCm38.p6 Ensembl397,738,854 - 97,768,009 (-)Ensembl
Ensembl Acc Id: ENSMUST00000090750   ⟹   ENSMUSP00000088254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,597,181 - 97,796,023 (-)Ensembl
GRCm38.p6 Ensembl397,689,865 - 97,888,707 (-)Ensembl
Ensembl Acc Id: ENSMUST00000107038   ⟹   ENSMUSP00000102653
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,654,009 - 97,775,564 (-)Ensembl
GRCm38.p6 Ensembl397,746,693 - 97,868,248 (-)Ensembl
Ensembl Acc Id: ENSMUST00000163531
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,728,298 - 97,775,513 (-)Ensembl
GRCm38.p6 Ensembl397,820,982 - 97,868,197 (-)Ensembl
Ensembl Acc Id: ENSMUST00000168438   ⟹   ENSMUSP00000131170
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,597,140 - 97,796,023 (-)Ensembl
GRCm38.p6 Ensembl397,689,824 - 97,888,707 (-)Ensembl
Ensembl Acc Id: ENSMUST00000175751   ⟹   ENSMUSP00000134832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,648,133 - 97,675,247 (-)Ensembl
GRCm38.p6 Ensembl397,740,817 - 97,767,931 (-)Ensembl
Ensembl Acc Id: ENSMUST00000197791
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,602,297 - 97,604,583 (-)Ensembl
GRCm38.p6 Ensembl397,694,981 - 97,697,267 (-)Ensembl
Ensembl Acc Id: ENSMUST00000200063
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,597,146 - 97,602,339 (-)Ensembl
GRCm38.p6 Ensembl397,689,830 - 97,695,023 (-)Ensembl
Ensembl Acc Id: ENSMUST00000200232   ⟹   ENSMUSP00000142941
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,704,048 - 97,731,937 (-)Ensembl
GRCm38.p6 Ensembl397,796,732 - 97,824,621 (-)Ensembl
RefSeq Acc Id: NM_001039376   ⟹   NP_001034465
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,597,144 - 97,796,023 (-)NCBI
GRCm38397,689,828 - 97,888,707 (-)NCBI
MGSCv37397,493,751 - 97,692,630 (-)RGD
Celera399,089,670 - 99,287,699 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001289701   ⟹   NP_001276630
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,597,144 - 97,796,023 (-)NCBI
GRCm38397,689,828 - 97,888,707 (-)NCBI
Celera399,089,670 - 99,287,699 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001289702   ⟹   NP_001276631
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,597,144 - 97,796,023 (-)NCBI
GRCm38397,689,828 - 97,888,707 (-)NCBI
Celera399,089,670 - 99,287,699 (-)NCBI
Sequence:
RefSeq Acc Id: NM_178080   ⟹   NP_835181
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,646,160 - 97,675,330 (-)NCBI
GRCm38397,738,844 - 97,768,014 (-)NCBI
MGSCv37397,493,751 - 97,692,630 (-)RGD
Celera399,089,670 - 99,287,699 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_110360
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,646,160 - 97,675,330 (-)NCBI
GRCm38397,738,844 - 97,768,014 (-)NCBI
Celera399,089,670 - 99,287,699 (-)NCBI
Sequence:
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: NP_001034465   ⟸   NM_001039376
- Peptide Label: isoform 1
- UniProtKB: B2RUJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_835181   ⟸   NM_178080
- Peptide Label: isoform 2
- UniProtKB: Q80YT7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001276631   ⟸   NM_001289702
- Peptide Label: isoform 6
- UniProtKB: E9Q1A0 (UniProtKB/TrEMBL),   B7ZNY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001276630   ⟸   NM_001289701
- Peptide Label: isoform 5
- UniProtKB: G3X9L9 (UniProtKB/TrEMBL),   B2RUJ9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000088254   ⟸   ENSMUST00000090750
Name Modeler Protein Id AA Range Protein Structure
AF-Q80YT7-F1-model_v2 AlphaFold Q80YT7 1-2224 view protein structure

RGD ID:6834205
Promoter ID:MM_KWN:35453
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_178080
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36397,570,796 - 97,572,407 (-)MPROMDB
RGD ID:6834207
Promoter ID:MM_KWN:35454
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:NM_001110163
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36397,628,006 - 97,628,506 (-)MPROMDB
RGD ID:6834201
Promoter ID:MM_KWN:35455
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   MEF_B4
Transcripts:ENSMUST00000107038,   NM_177145,   UC008QPH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36397,671,854 - 97,672,354 (-)MPROMDB
RGD ID:6834203
Promoter ID:MM_KWN:35456
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000090750,   NM_001039376,   UC008QPE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36397,692,336 - 97,692,836 (-)MPROMDB
RGD ID:6881746
Promoter ID:EPDNEW_M4324
Type:initiation region
Name:Pde4dip_2
Description:Mus musculus phosphodiesterase 4D interacting protein , transcriptvariant 6, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4325  EPDNEW_M4326  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38397,767,938 - 97,767,998EPDNEW
RGD ID:6881748
Promoter ID:EPDNEW_M4325
Type:initiation region
Name:Pde4dip_1
Description:Mus musculus phosphodiesterase 4D interacting protein , transcriptvariant 6, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4324  EPDNEW_M4326  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38397,868,248 - 97,868,308EPDNEW
RGD ID:6881750
Promoter ID:EPDNEW_M4326
Type:initiation region
Name:Pde4dip_3
Description:Mus musculus phosphodiesterase 4D interacting protein , transcriptvariant 6, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4324  EPDNEW_M4325  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38397,888,781 - 97,888,841EPDNEW


1 to 33 of 33 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000038170 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000045243 ENTREZGENE
  ENSMUST00000045243.15 UniProtKB/Swiss-Prot
  ENSMUST00000090750 ENTREZGENE
  ENSMUST00000168438 ENTREZGENE
InterPro Cnn_1N UniProtKB/Swiss-Prot
  MT-associated_AKAP9-binding UniProtKB/Swiss-Prot
  Olduvai_dom UniProtKB/Swiss-Prot
KEGG Report mmu:83679 UniProtKB/Swiss-Prot
MGD MGI:1891434 ENTREZGENE
NCBI Gene 83679 ENTREZGENE
PANTHER MYOMEGALIN UniProtKB/Swiss-Prot
  MYOMEGALIN UniProtKB/Swiss-Prot
Pfam Cnn_1N UniProtKB/Swiss-Prot
PhenoGen Pde4dip PhenoGen
PROSITE NBPF UniProtKB/Swiss-Prot
SMART DUF1220 UniProtKB/Swiss-Prot
UniProt A0A0G2JEX6_MOUSE UniProtKB/TrEMBL
  A0A979HLS3_MOUSE UniProtKB/TrEMBL
  B2RUJ9 ENTREZGENE, UniProtKB/TrEMBL
  B7ZNY0 ENTREZGENE, UniProtKB/TrEMBL
  E9Q1A0 ENTREZGENE, UniProtKB/TrEMBL
  G3X9L9 ENTREZGENE, UniProtKB/TrEMBL
  H3BJ38_MOUSE UniProtKB/TrEMBL
  MYOME_MOUSE UniProtKB/Swiss-Prot
  Q3UR03_MOUSE UniProtKB/TrEMBL
  Q80YT7 ENTREZGENE
  Q8BKQ2_MOUSE UniProtKB/TrEMBL
  Q9ER49_MOUSE UniProtKB/TrEMBL
UniProt Secondary C4IXU1 UniProtKB/Swiss-Prot
  Q05CH5 UniProtKB/Swiss-Prot
  Q80U00 UniProtKB/Swiss-Prot
  Q8K240 UniProtKB/Swiss-Prot
1 to 33 of 33 rows