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Gene: CTTNBP2NL (CTTNBP2 N-terminal like) Homo sapiens

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Symbol:

CTTNBP2NL

Name:

CTTNBP2 N-terminal like

RGD ID:

1607020

HGNC Page

HGNC:25330

Description:

Enables protein phosphatase 2A binding activity. Acts upstream of or within negative regulation of transmembrane transport; negative regulation of transporter activity; and protein dephosphorylation. Located in actin cytoskeleton. Part of FAR/SIN/STRIPAK complex.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CTTNBP2 N-terminal-like protein; DKFZp547A023; FLJ13278

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Cttnbp2nl (CTTNBP2 N-terminal like)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Cttnbp2nl (CTTNBP2 N-terminal like)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Cttnbp2nl (CTTNBP2 N-terminal like)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	CTTNBP2NL (CTTNBP2 N-terminal like)	NCBI	Ortholog
Canis lupus familiaris (dog):	CTTNBP2NL (CTTNBP2 N-terminal like)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cttnbp2nl (CTTNBP2 N-terminal like)	NCBI	Ortholog
Sus scrofa (pig):	CTTNBP2NL (CTTNBP2 N-terminal like)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):	CTTNBP2NL (CTTNBP2 N-terminal like)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Cttnbp2nl (CTTNBP2 N-terminal like)	NCBI	Ortholog
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Cttnbp2nl (CTTNBP2 N-terminal like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cttnbp2nl (CTTNBP2 N-terminal like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	cttnbp2nlb (CTTNBP2 N-terminal like b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid\|ZFIN)
Danio rerio (zebrafish):	cttnbp2nla (CTTNBP2 N-terminal like a)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|ZFIN)
Drosophila melanogaster (fruit fly):	CG10915	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	C49H3.6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	cttnbp2nl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	cttnbp2nl.L	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	112,391,087 - 112,461,164 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	112,396,214 - 112,463,456 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	112,938,836 - 113,003,786 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	112,740,383 - 112,803,739 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	111,169,369 - 111,234,318 (+)	NCBI		Celera
Cytogenetic Map	1	p13.2	NCBI
HuRef	1	110,795,912 - 110,861,154 (+)	NCBI		HuRef
CHM1_1	1	113,053,632 - 113,118,610 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	112,403,339 - 112,473,705 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTTNBP2NL	Human	hereditary spastic paraplegia 47		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Hereditary spastic paraplegia 47	ClinVar	PMID:22290197 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTTNBP2NL	Human	Experimental Liver Cirrhosis		EXP		11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:25380136

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTTNBP2NL	Human	1,1-dichloroethene	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	vinylidene chloride results in increased expression of CTTNBP2NL mRNA	CTD	PMID:26682919
CTTNBP2NL	Human	1,2-dimethylhydrazine	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:22206623
CTTNBP2NL	Human	1,2-dimethylhydrazine	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:22206623
CTTNBP2NL	Human	1-naphthyl isothiocyanate	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	1-Naphthylisothiocyanate results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25380136
CTTNBP2NL	Human	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of CTTNBP2NL mRNA	CTD	PMID:21570461
CTTNBP2NL	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of CTTNBP2NL mRNA	CTD	PMID:34747641
CTTNBP2NL	Human	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:28628672
CTTNBP2NL	Human	4,4'-diaminodiphenylmethane	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	4 and 4'-diaminodiphenylmethane results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25380136 and PMID:30723492
CTTNBP2NL	Human	4,4'-sulfonyldiphenol	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:28628672
CTTNBP2NL	Human	4,4'-sulfonyldiphenol	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	bisphenol S results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:39298647
CTTNBP2NL	Human	4-hydroxyphenyl retinamide	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Fenretinide results in increased expression of CTTNBP2NL mRNA	CTD	PMID:28973697
CTTNBP2NL	Human	6-propyl-2-thiouracil	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Propylthiouracil results in increased expression of CTTNBP2NL mRNA	CTD	PMID:22504374 more ...
CTTNBP2NL	Human	acetamide	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	acetamide results in increased expression of CTTNBP2NL mRNA	CTD	PMID:31881176
CTTNBP2NL	Human	aflatoxin B1	affects expression	EXP		6480464	Aflatoxin B1 affects the expression of CTTNBP2NL protein	CTD	PMID:20106945
CTTNBP2NL	Human	amitrole	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Amitrole results in increased expression of CTTNBP2NL mRNA	CTD	PMID:30047161
CTTNBP2NL	Human	arsane	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Arsenic results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:19654921
CTTNBP2NL	Human	arsenic atom	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Arsenic results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:19654921
CTTNBP2NL	Human	arsenite(3-)	multiple interactions	EXP		6480464	arsenite inhibits the reaction [G3BP1 protein binds to CTTNBP2NL mRNA]	CTD	PMID:32406909
CTTNBP2NL	Human	arsenous acid	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Arsenic Trioxide results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:29095437
CTTNBP2NL	Human	arsenous acid	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	Metformin inhibits the reaction [Arsenic Trioxide results in decreased expression of CTTNBP2NL mRNA]	CTD	PMID:29095437
CTTNBP2NL	Human	atrazine	decreases expression	EXP		6480464	Atrazine results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:22378314
CTTNBP2NL	Human	benzo[a]pyrene	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of CTTNBP2NL mRNA	CTD	PMID:21569818 and PMID:22228805
CTTNBP2NL	Human	benzo[a]pyrene	affects methylation	EXP		6480464	Benzo(a)pyrene affects the methylation of CTTNBP2NL intron	CTD	PMID:30157460
CTTNBP2NL	Human	benzo[a]pyrene	increases methylation	ISO	Cttnbp2nl (Mus musculus)	6480464	Benzo(a)pyrene results in increased methylation of CTTNBP2NL intron	CTD	PMID:27901495
CTTNBP2NL	Human	benzo[a]pyrene	increases methylation	EXP		6480464	Benzo(a)pyrene results in increased methylation of CTTNBP2NL 5' UTR	CTD	PMID:27901495
CTTNBP2NL	Human	benzo[a]pyrene diol epoxide I	decreases expression	EXP		6480464	7 more ...	CTD	PMID:19150397
CTTNBP2NL	Human	Benzo[k]fluoranthene	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	benzo(k)fluoranthene results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:26377693
CTTNBP2NL	Human	bisphenol A	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	bisphenol A results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25181051 more ...
CTTNBP2NL	Human	bisphenol F	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	bisphenol F results in increased expression of CTTNBP2NL mRNA	CTD	PMID:38685157
CTTNBP2NL	Human	cadmium atom	multiple interactions	EXP		6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:35301059
CTTNBP2NL	Human	cadmium dichloride	multiple interactions	EXP		6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:35301059
CTTNBP2NL	Human	caffeine	decreases phosphorylation	EXP		6480464	Caffeine results in decreased phosphorylation of CTTNBP2NL protein	CTD	PMID:35688186
CTTNBP2NL	Human	carbon nanotube	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Nanotubes and Carbon results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25554681
CTTNBP2NL	Human	CGP 52608	multiple interactions	EXP		6480464	CGP 52608 promotes the reaction [RORA protein binds to CTTNBP2NL gene]	CTD	PMID:28238834
CTTNBP2NL	Human	chloroprene	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Chloroprene results in increased expression of CTTNBP2NL mRNA	CTD	PMID:23125180
CTTNBP2NL	Human	chlorpyrifos	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Chlorpyrifos results in increased expression of CTTNBP2NL mRNA	CTD	PMID:37019170
CTTNBP2NL	Human	copper(II) sulfate	increases expression	EXP		6480464	Copper Sulfate results in increased expression of CTTNBP2NL mRNA	CTD	PMID:19549813
CTTNBP2NL	Human	coumarin	affects phosphorylation	EXP		6480464	coumarin affects the phosphorylation of CTTNBP2NL protein	CTD	PMID:35688186
CTTNBP2NL	Human	coumestrol	multiple interactions	EXP		6480464	[Coumestrol co-treated with 2 more ...	CTD	PMID:19167446
CTTNBP2NL	Human	cyclosporin A	increases expression	EXP		6480464	Cyclosporine results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25562108
CTTNBP2NL	Human	cyclosporin A	decreases expression	EXP		6480464	Cyclosporine results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:27989131
CTTNBP2NL	Human	dexamethasone	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:28628672
CTTNBP2NL	Human	diarsenic trioxide	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	Metformin inhibits the reaction [Arsenic Trioxide results in decreased expression of CTTNBP2NL mRNA]	CTD	PMID:29095437
CTTNBP2NL	Human	diarsenic trioxide	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Arsenic Trioxide results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:29095437
CTTNBP2NL	Human	dorsomorphin	multiple interactions	EXP		6480464	[NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:27188386
CTTNBP2NL	Human	doxorubicin	decreases expression	EXP		6480464	Doxorubicin results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:29803840
CTTNBP2NL	Human	endosulfan	decreases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Endosulfan results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:29391264
CTTNBP2NL	Human	Enterolactone	multiple interactions	EXP		6480464	[Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:19167446
CTTNBP2NL	Human	ethyl methanesulfonate	increases expression	EXP		6480464	Ethyl Methanesulfonate results in increased expression of CTTNBP2NL mRNA	CTD	PMID:23649840
CTTNBP2NL	Human	fluoranthene	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	[1-methylanthracene co-treated with fluoranthene] results in increased expression of CTTNBP2NL mRNA	CTD	PMID:28329830
CTTNBP2NL	Human	folic acid	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:22206623
CTTNBP2NL	Human	formaldehyde	increases expression	EXP		6480464	Formaldehyde results in increased expression of CTTNBP2NL mRNA	CTD	PMID:23649840
CTTNBP2NL	Human	FR900359	decreases phosphorylation	EXP		6480464	FR900359 results in decreased phosphorylation of CTTNBP2NL protein	CTD	PMID:37730182
CTTNBP2NL	Human	furan	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	furan results in increased expression of CTTNBP2NL mRNA	CTD	PMID:27387713
CTTNBP2NL	Human	gentamycin	decreases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Gentamicins results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:33387578
CTTNBP2NL	Human	indometacin	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:28628672
CTTNBP2NL	Human	inulin	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:36331819
CTTNBP2NL	Human	ivermectin	decreases expression	EXP		6480464	Ivermectin results in decreased expression of CTTNBP2NL protein	CTD	PMID:32959892
CTTNBP2NL	Human	ketamine	decreases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Ketamine results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:20080153
CTTNBP2NL	Human	metformin	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	Metformin inhibits the reaction [Arsenic Trioxide results in decreased expression of CTTNBP2NL mRNA]	CTD	PMID:29095437
CTTNBP2NL	Human	methimazole	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Methimazole results in increased expression of CTTNBP2NL mRNA	CTD	PMID:22504374 and PMID:30047161
CTTNBP2NL	Human	methyl methanesulfonate	increases expression	EXP		6480464	Methyl Methanesulfonate results in increased expression of CTTNBP2NL mRNA	CTD	PMID:23649840
CTTNBP2NL	Human	methylmercury chloride	decreases expression	EXP		6480464	methylmercuric chloride results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:28001369
CTTNBP2NL	Human	N-nitrosodimethylamine	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Dimethylnitrosamine results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25380136
CTTNBP2NL	Human	oxaliplatin	multiple interactions	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	[oxaliplatin co-treated with Topotecan] results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25729387
CTTNBP2NL	Human	paracetamol	affects expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Acetaminophen affects the expression of CTTNBP2NL mRNA	CTD	PMID:17562736
CTTNBP2NL	Human	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:36331819
CTTNBP2NL	Human	pirinixic acid	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	pirinixic acid results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:20813756
CTTNBP2NL	Human	potassium dichromate	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Potassium Dichromate results in increased expression of CTTNBP2NL mRNA	CTD	PMID:23608068
CTTNBP2NL	Human	resveratrol	multiple interactions	EXP		6480464	[Coumestrol co-treated with resveratrol] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:19167446
CTTNBP2NL	Human	SB 431542	multiple interactions	EXP		6480464	[NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:27188386
CTTNBP2NL	Human	silicon dioxide	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Silicon Dioxide results in increased expression of CTTNBP2NL mRNA	CTD	PMID:19073995 and PMID:33720480
CTTNBP2NL	Human	sodium arsenite	increases expression	EXP		6480464	sodium arsenite results in increased expression of CTTNBP2NL mRNA	CTD	PMID:38568856
CTTNBP2NL	Human	Soman	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Soman results in increased expression of CTTNBP2NL mRNA	CTD	PMID:19281266
CTTNBP2NL	Human	succimer	multiple interactions	ISO	Cttnbp2nl (Mus musculus)	6480464	[Succimer binds to Magnetite Nanoparticles] which results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:21641980
CTTNBP2NL	Human	sulfadimethoxine	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Sulfadimethoxine results in increased expression of CTTNBP2NL mRNA	CTD	PMID:30047161
CTTNBP2NL	Human	sulforaphane	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	sulforaphane results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:30529165
CTTNBP2NL	Human	sunitinib	decreases expression	EXP		6480464	Sunitinib results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:31533062
CTTNBP2NL	Human	thioacetamide	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Thioacetamide results in increased expression of CTTNBP2NL mRNA	CTD	PMID:34492290
CTTNBP2NL	Human	titanium dioxide	decreases methylation	ISO	Cttnbp2nl (Mus musculus)	6480464	titanium dioxide results in decreased methylation of CTTNBP2NL gene and titanium dioxide results in decreased methylation of CTTNBP2NL promoter	CTD	PMID:35295148
CTTNBP2NL	Human	topotecan	multiple interactions	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	[oxaliplatin co-treated with Topotecan] results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25729387
CTTNBP2NL	Human	topotecan	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	Topotecan results in increased expression of CTTNBP2NL mRNA	CTD	PMID:25729387
CTTNBP2NL	Human	triadimefon	increases expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	triadimefon results in increased expression of CTTNBP2NL mRNA	CTD	PMID:30047161
CTTNBP2NL	Human	trichostatin A	decreases expression	EXP		6480464	trichostatin A results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:24935251
CTTNBP2NL	Human	trichostatin A	affects expression	EXP		6480464	trichostatin A affects the expression of CTTNBP2NL mRNA	CTD	PMID:28542535
CTTNBP2NL	Human	triptonide	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	triptonide results in increased expression of CTTNBP2NL mRNA	CTD	PMID:33045310
CTTNBP2NL	Human	trovafloxacin	increases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	trovafloxacin results in increased expression of CTTNBP2NL mRNA	CTD	PMID:35537566
CTTNBP2NL	Human	urethane	increases expression	EXP		6480464	Urethane results in increased expression of CTTNBP2NL mRNA	CTD	PMID:28818685
CTTNBP2NL	Human	valproic acid	decreases methylation	EXP		6480464	Valproic Acid results in decreased methylation of CTTNBP2NL gene	CTD	PMID:29154799
CTTNBP2NL	Human	vancomycin	decreases expression	ISO	Cttnbp2nl (Mus musculus)	6480464	Vancomycin results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:18930951
CTTNBP2NL	Human	vinclozolin	affects expression	ISO	Cttnbp2nl (Rattus norvegicus)	6480464	vinclozolin affects the expression of CTTNBP2NL mRNA	CTD	PMID:19015723
CTTNBP2NL	Human	vorinostat	multiple interactions	EXP		6480464	[NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CTTNBP2NL mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTTNBP2NL	Human	negative regulation of transmembrane transport	acts_upstream_of_or_within	IMP		150520179	PMID:24218568	MGI	PMID:24218568
CTTNBP2NL	Human	negative regulation of transporter activity	acts_upstream_of_or_within	IMP		150520179	PMID:24218568	MGI	PMID:24218568
CTTNBP2NL	Human	protein dephosphorylation	acts_upstream_of_or_within	IMP		150520179	PMID:24218568	MGI	PMID:24218568
CTTNBP2NL	Human	protein localization to actin cytoskeleton	involved_in	IBA	FB:FBgn0034308 and PANTHER:PTN000570656	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTTNBP2NL	Human	actin cytoskeleton	is_active_in	IBA	FB:FBgn0034308 more ...	150520179		GO_Central	GO_REF:0000033
CTTNBP2NL	Human	actin cytoskeleton	located_in	IDA		150520179		LIFEdb	GO_REF:0000054
CTTNBP2NL	Human	cell projection	located_in	IEA	UniProtKB-KW:KW-0966	150520179		UniProt	GO_REF:0000043
CTTNBP2NL	Human	cell projection	located_in	IEA	UniProtKB-SubCell:SL-0280	150520179		UniProt	GO_REF:0000044
CTTNBP2NL	Human	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
CTTNBP2NL	Human	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
CTTNBP2NL	Human	cytoskeleton	located_in	IEA	UniProtKB-KW:KW-0206	150520179		UniProt	GO_REF:0000043
CTTNBP2NL	Human	FAR/SIN/STRIPAK complex	part_of	IDA		150520179	PMID:18782753	UniProt	PMID:18782753
CTTNBP2NL	Human	lamellipodium	located_in	IEA	UniProtKB-SubCell:SL-0291	150520179		UniProt	GO_REF:0000044
CTTNBP2NL	Human	stress fiber	located_in	IEA	UniProtKB-SubCell:SL-0501	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:Q9P289	150520179	PMID:35271311	IntAct	PMID:35271311
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:Q9P289 and UniProtKB:Q9Y6E0	150520179	PMID:23455922 and PMID:32707033	IntAct	PMID:23455922 and PMID:32707033
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:O43815 more ...	150520179	PMID:24255178	IntAct	PMID:24255178
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:O43815 and UniProtKB:Q13033	150520179	PMID:24366813 and PMID:26496610	IntAct	PMID:24366813 and PMID:26496610
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:O75031 and UniProtKB:Q96KN3	150520179	PMID:32296183	IntAct	PMID:32296183
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:Q9Y3A3	150520179	PMID:19156129	IntAct	PMID:19156129
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:O43815 more ...	150520179	PMID:18782753	IntAct	PMID:18782753
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:O14964 and UniProtKB:Q8N6Y0	150520179	PMID:25416956	IntAct	PMID:25416956
CTTNBP2NL	Human	protein binding	enables	IPI	UniProtKB:O43815 more ...	150520179	PMID:33961781	IntAct	PMID:33961781
CTTNBP2NL	Human	protein phosphatase 2A binding	enables	IDA		150520179	PMID:24218568	MGI	PMID:24218568

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10718198	PMID:11076863	PMID:11256614	PMID:12477932	PMID:14702039	PMID:15302935	PMID:15345747	PMID:15489334	PMID:15489336	PMID:16344560	PMID:16381901	PMID:16710414
PMID:16964243	PMID:18029348	PMID:18782753	PMID:19156129	PMID:19615732	PMID:20360068	PMID:21873635	PMID:22863883	PMID:23277359	PMID:23443559	PMID:23455922	PMID:24218568
PMID:24255178	PMID:24366813	PMID:25416956	PMID:25798074	PMID:25921289	PMID:26186194	PMID:26344197	PMID:26496610	PMID:26638075	PMID:26777405	PMID:27432908	PMID:28330616
PMID:28514442	PMID:28524877	PMID:29117863	PMID:29299163	PMID:29507755	PMID:29509190	PMID:29676528	PMID:31024071	PMID:31527615	PMID:31594818	PMID:32296183	PMID:32640226
PMID:32687490	PMID:32707033	PMID:33853758	PMID:33961781	PMID:34079125	PMID:34795231	PMID:35271311	PMID:35831314	PMID:35944360	PMID:36779422	PMID:37468549	PMID:38943005

CTTNBP2NL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	112,391,087 - 112,461,164 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	112,396,214 - 112,463,456 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	112,938,836 - 113,003,786 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	112,740,383 - 112,803,739 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	111,169,369 - 111,234,318 (+)	NCBI		Celera
Cytogenetic Map	1	p13.2	NCBI
HuRef	1	110,795,912 - 110,861,154 (+)	NCBI		HuRef
CHM1_1	1	113,053,632 - 113,118,610 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	112,403,339 - 112,473,705 (+)	NCBI		T2T-CHM13v2.0

Cttnbp2nl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	104,909,231 - 104,960,462 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	104,909,231 - 104,960,462 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	105,001,915 - 105,053,146 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	105,001,915 - 105,053,146 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	104,804,833 - 104,856,064 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	105,131,801 - 105,181,202 (-)	NCBI		MGSCv36	mm8
Celera	3	107,199,733 - 107,250,872 (-)	NCBI		Celera
Cytogenetic Map	3	F2.2	NCBI
cM Map	3	45.88	NCBI

Cttnbp2nl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	195,196,318 - 195,244,792 (-)	NCBI		GRCr8
mRatBN7.2	2	192,507,963 - 192,554,548 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	192,507,963 - 192,541,101 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	200,101,956 - 200,148,586 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	197,974,589 - 198,021,168 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	192,791,536 - 192,838,115 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	207,495,056 - 207,541,808 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	207,495,055 - 207,541,645 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	226,917,956 - 226,964,542 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	200,272,402 - 200,319,448 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	200,235,155 - 200,282,193 (-)	NCBI
Celera	2	184,973,748 - 185,020,236 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Cttnbp2nl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	15,857,948 - 15,910,486 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955435	15,858,056 - 15,910,486 (+)	NCBI	ChiLan1.0	ChiLan1.0

CTTNBP2NL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	114,574,923 - 114,640,338 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	113,723,050 - 113,788,449 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	115,049,389 - 115,114,146 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	125,233,780 - 125,301,107 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	125,236,986 - 125,300,860 (-)	Ensembl	panpan1.1		panPan2

CTTNBP2NL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	63,078,111 - 63,132,251 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	63,079,732 - 63,118,653 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	62,591,512 - 62,646,041 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	64,252,356 - 64,306,962 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	64,252,356 - 64,306,001 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	62,986,214 - 63,040,734 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	63,044,585 - 63,099,107 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	63,852,322 - 63,893,840 (-)	NCBI		UU_Cfam_GSD_1.0

Cttnbp2nl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	16,442,784 - 16,495,365 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936690	982,402 - 1,035,005 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936690	982,414 - 1,034,947 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTTNBP2NL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	107,959,571 - 108,011,611 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	107,957,420 - 108,012,764 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	118,026,554 - 118,082,336 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTTNBP2NL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	21,181,241 - 21,248,049 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	21,180,925 - 21,247,981 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	37,233,367 - 37,300,128 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cttnbp2nl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	8,216,556 - 8,254,626 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	8,201,321 - 8,254,626 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in CTTNBP2NL
49 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 1p13.2(chr1:112147402-113470058)x3	copy number gain	See cases [RCV000051203]	Chr1:112147402..113470058 [GRCh38] Chr1:112690024..114012680 [GRCh37] Chr1:112491547..113814203 [NCBI36] Chr1:1p13.2	uncertain significance
GRCh38/hg38 1p13.3-12(chr1:109756630-118650204)x3	copy number gain	See cases [RCV000051827]	Chr1:109756630..118650204 [GRCh38] Chr1:110299252..119192827 [GRCh37] Chr1:110100775..118994350 [NCBI36] Chr1:1p13.3-12	pathogenic
NM_018704.2(CTTNBP2NL):c.100-520A>G	single nucleotide variant	Lung cancer [RCV000089722]	Chr1:112448422 [GRCh38] Chr1:112991044 [GRCh37] Chr1:1p13.2	uncertain significance
GRCh38/hg38 1p21.1-12(chr1:104325484-119977655)x3	copy number gain	See cases [RCV000142953]	Chr1:104325484..119977655 [GRCh38] Chr1:104868106..120471049 [GRCh37] Chr1:104669629..120321801 [NCBI36] Chr1:1p21.1-12	pathogenic
GRCh37/hg19 1p13.2(chr1:112311427-113836310)x1	copy number loss	See cases [RCV000448763]	Chr1:112311427..113836310 [GRCh37] Chr1:1p13.2	uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3	copy number gain	See cases [RCV000510383]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)	copy number gain	See cases [RCV000510926]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
NM_018704.3(CTTNBP2NL):c.1447C>T (p.Pro483Ser)	single nucleotide variant	not specified [RCV004332838]	Chr1:112456939 [GRCh38] Chr1:112999561 [GRCh37] Chr1:1p13.2	uncertain significance
GRCh37/hg19 1p22.1-11.2(chr1:93837992-121343783)x3	copy number gain	See cases [RCV000512354]	Chr1:93837992..121343783 [GRCh37] Chr1:1p22.1-11.2	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3	copy number gain	not provided [RCV000736295]	Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3	copy number gain	not provided [RCV000736305]	Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3	copy number loss	not provided [RCV000762767]	Chr1:20608823..120546301 [GRCh37] Chr1:1p36.12-12	likely benign
NM_018704.3(CTTNBP2NL):c.916A>G (p.Met306Val)	single nucleotide variant	not provided [RCV000963765]	Chr1:112456408 [GRCh38] Chr1:112999030 [GRCh37] Chr1:1p13.2	benign
NM_018704.3(CTTNBP2NL):c.655G>A (p.Glu219Lys)	single nucleotide variant	not specified [RCV004284277]	Chr1:112456147 [GRCh38] Chr1:112998769 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1489G>A (p.Ala497Thr)	single nucleotide variant	not specified [RCV004292943]	Chr1:112456981 [GRCh38] Chr1:112999603 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.211G>A (p.Glu71Lys)	single nucleotide variant	not provided [RCV000888900]	Chr1:112449053 [GRCh38] Chr1:112991675 [GRCh37] Chr1:1p13.2	benign
GRCh37/hg19 1p21.2-12(chr1:102021465-119737478)	copy number loss	Seizure [RCV001352640]	Chr1:102021465..119737478 [GRCh37] Chr1:1p21.2-12	pathogenic
GRCh37/hg19 1p21.3-13.2(chr1:95046805-114714931)	copy number loss	not specified [RCV002053503]	Chr1:95046805..114714931 [GRCh37] Chr1:1p21.3-13.2	pathogenic
GRCh37/hg19 1p13.3-11.2(chr1:111647582-121343783)	copy number gain	not specified [RCV002053602]	Chr1:111647582..121343783 [GRCh37] Chr1:1p13.3-11.2	pathogenic
NC_000001.10:g.(?_112318699)_(115576848_?)del	deletion	Hereditary spastic paraplegia 47 [RCV003109541]	Chr1:112318699..115576848 [GRCh37] Chr1:1p13.2	pathogenic
NC_000001.10:g.(?_111145905)_(114454813_?)del	deletion	not provided [RCV003113195]	Chr1:111145905..114454813 [GRCh37] Chr1:1p13.3-13.2	pathogenic
NM_018704.3(CTTNBP2NL):c.1477G>C (p.Asp493His)	single nucleotide variant	not specified [RCV004322868]	Chr1:112456969 [GRCh38] Chr1:112999591 [GRCh37] Chr1:1p13.2	uncertain significance
GRCh37/hg19 1p13.2(chr1:112680493-113047932)x1	copy number loss	not provided [RCV002474978]	Chr1:112680493..113047932 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1351T>A (p.Tyr451Asn)	single nucleotide variant	not specified [RCV004147328]	Chr1:112456843 [GRCh38] Chr1:112999465 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.641T>C (p.Val214Ala)	single nucleotide variant	not specified [RCV004156293]	Chr1:112456133 [GRCh38] Chr1:112998755 [GRCh37] Chr1:1p13.2	likely benign
NM_018704.3(CTTNBP2NL):c.403A>G (p.Met135Val)	single nucleotide variant	not specified [RCV004136721]	Chr1:112454521 [GRCh38] Chr1:112997143 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.455C>T (p.Ser152Phe)	single nucleotide variant	not specified [RCV004080940]	Chr1:112455947 [GRCh38] Chr1:112998569 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1912A>G (p.Ser638Gly)	single nucleotide variant	not specified [RCV004137919]	Chr1:112457404 [GRCh38] Chr1:113000026 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.947G>A (p.Ser316Asn)	single nucleotide variant	not specified [RCV004120793]	Chr1:112456439 [GRCh38] Chr1:112999061 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1102G>T (p.Val368Leu)	single nucleotide variant	not specified [RCV004229695]	Chr1:112456594 [GRCh38] Chr1:112999216 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.832G>A (p.Glu278Lys)	single nucleotide variant	not specified [RCV004213276]	Chr1:112456324 [GRCh38] Chr1:112998946 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1367A>G (p.Asn456Ser)	single nucleotide variant	not specified [RCV004148635]	Chr1:112456859 [GRCh38] Chr1:112999481 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.848A>G (p.His283Arg)	single nucleotide variant	not specified [RCV004146392]	Chr1:112456340 [GRCh38] Chr1:112998962 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.497G>A (p.Ser166Asn)	single nucleotide variant	not specified [RCV004198856]	Chr1:112455989 [GRCh38] Chr1:112998611 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1798A>T (p.Thr600Ser)	single nucleotide variant	not specified [RCV004202645]	Chr1:112457290 [GRCh38] Chr1:112999912 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.276C>A (p.Asn92Lys)	single nucleotide variant	not specified [RCV004117076]	Chr1:112449118 [GRCh38] Chr1:112991740 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1123C>T (p.Arg375Trp)	single nucleotide variant	not specified [RCV004080247]	Chr1:112456615 [GRCh38] Chr1:112999237 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1079G>C (p.Arg360Thr)	single nucleotide variant	not specified [RCV004212246]	Chr1:112456571 [GRCh38] Chr1:112999193 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1127A>G (p.Glu376Gly)	single nucleotide variant	not specified [RCV004217384]	Chr1:112456619 [GRCh38] Chr1:112999241 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.244A>G (p.Ile82Val)	single nucleotide variant	not specified [RCV004279720]	Chr1:112449086 [GRCh38] Chr1:112991708 [GRCh37] Chr1:1p13.2	likely benign
NM_018704.3(CTTNBP2NL):c.1865A>G (p.Asn622Ser)	single nucleotide variant	not specified [RCV004280268]	Chr1:112457357 [GRCh38] Chr1:112999979 [GRCh37] Chr1:1p13.2	likely benign
NM_018704.3(CTTNBP2NL):c.965C>T (p.Thr322Ile)	single nucleotide variant	not specified [RCV004322735]	Chr1:112456457 [GRCh38] Chr1:112999079 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1829C>T (p.Thr610Ile)	single nucleotide variant	not specified [RCV004352310]	Chr1:112457321 [GRCh38] Chr1:112999943 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1037C>G (p.Ala346Gly)	single nucleotide variant	not specified [RCV004354049]	Chr1:112456529 [GRCh38] Chr1:112999151 [GRCh37] Chr1:1p13.2	uncertain significance
GRCh37/hg19 1p13.3-13.1(chr1:110066946-116672408)x1	copy number loss	not provided [RCV003483294]	Chr1:110066946..116672408 [GRCh37] Chr1:1p13.3-13.1	pathogenic
NM_018704.3(CTTNBP2NL):c.1126G>A (p.Glu376Lys)	single nucleotide variant	not specified [RCV004375147]	Chr1:112456618 [GRCh38] Chr1:112999240 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1180G>T (p.Val394Leu)	single nucleotide variant	not specified [RCV004375149]	Chr1:112456672 [GRCh38] Chr1:112999294 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1610C>T (p.Ala537Val)	single nucleotide variant	not specified [RCV004375151]	Chr1:112457102 [GRCh38] Chr1:112999724 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.583G>A (p.Glu195Lys)	single nucleotide variant	not specified [RCV004375152]	Chr1:112456075 [GRCh38] Chr1:112998697 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.818T>C (p.Ile273Thr)	single nucleotide variant	not specified [RCV004375154]	Chr1:112456310 [GRCh38] Chr1:112998932 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1144G>T (p.Ala382Ser)	single nucleotide variant	not specified [RCV004375148]	Chr1:112456636 [GRCh38] Chr1:112999258 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.687G>T (p.Leu229Phe)	single nucleotide variant	not specified [RCV004375153]	Chr1:112456179 [GRCh38] Chr1:112998801 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1058A>G (p.Asp353Gly)	single nucleotide variant	not specified [RCV004375146]	Chr1:112456550 [GRCh38] Chr1:112999172 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1445C>G (p.Pro482Arg)	single nucleotide variant	not specified [RCV004375150]	Chr1:112456937 [GRCh38] Chr1:112999559 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.22A>G (p.Lys8Glu)	single nucleotide variant	not specified [RCV004616044]	Chr1:112416187 [GRCh38] Chr1:112958809 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1586T>G (p.Phe529Cys)	single nucleotide variant	not specified [RCV004910822]	Chr1:112457078 [GRCh38] Chr1:112999700 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1124G>A (p.Arg375Gln)	single nucleotide variant	not specified [RCV004910824]	Chr1:112456616 [GRCh38] Chr1:112999238 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1661A>G (p.Lys554Arg)	single nucleotide variant	not specified [RCV004910819]	Chr1:112457153 [GRCh38] Chr1:112999775 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1777C>G (p.Pro593Ala)	single nucleotide variant	not specified [RCV004910818]	Chr1:112457269 [GRCh38] Chr1:112999891 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1532G>T (p.Arg511Ile)	single nucleotide variant	not specified [RCV004910816]	Chr1:112457024 [GRCh38] Chr1:112999646 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.393T>A (p.Asp131Glu)	single nucleotide variant	not specified [RCV004910825]	Chr1:112454511 [GRCh38] Chr1:112997133 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1052A>C (p.His351Pro)	single nucleotide variant	not specified [RCV004910821]	Chr1:112456544 [GRCh38] Chr1:112999166 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.280C>A (p.Gln94Lys)	single nucleotide variant	not specified [RCV004910820]	Chr1:112449122 [GRCh38] Chr1:112991744 [GRCh37] Chr1:1p13.2	uncertain significance
NM_018704.3(CTTNBP2NL):c.1073C>T (p.Thr358Ile)	single nucleotide variant	not specified [RCV004910817]	Chr1:112456565 [GRCh38] Chr1:112999187 [GRCh37] Chr1:1p13.2	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	1637
Count of miRNA genes:	976
Interacting mature miRNAs:	1131
Transcripts:	ENST00000271277, ENST00000441739, ENST00000502356, ENST00000607039
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597492830	GWAS1588904_H	COVID-19 QTL GWAS1588904 (human)		0.000007	COVID-19		1	112392939	112392940	Human
1300021	BP45_H	Blood pressure QTL 45 (human)	1.77	0.00218	Blood pressure	systolic	1	103389009	129389009	Human
597274879	GWAS1370953_H	educational attainment QTL GWAS1370953 (human)		8e-09	educational attainment		1	112421990	112421991	Human
597326467	GWAS1422541_H	FEV/FVC ratio QTL GWAS1422541 (human)		4e-12	FEV/FVC ratio	forced expiratory volume to forced vital capacity ratio (CMO:0000241)	1	112403161	112403162	Human
597061162	GWAS1157236_H	FEV/FVC ratio QTL GWAS1157236 (human)		5e-09	FEV/FVC ratio	forced expiratory volume to forced vital capacity ratio (CMO:0000241)	1	112403161	112403162	Human
597119130	GWAS1215204_H	neutrophil count QTL GWAS1215204 (human)		3e-16	neutrophil quantity (VT:0000222)	blood neutrophil count (CMO:0000030)	1	112404281	112404282	Human

SHGC-53201

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	113,000,728 - 113,000,855	UniSTS	GRCh37
Build 36	1	112,802,251 - 112,802,378	RGD	NCBI36
Celera	1	111,231,265 - 111,231,392	RGD
Cytogenetic Map	1	p13.2	UniSTS
HuRef	1	110,858,101 - 110,858,228	UniSTS
TNG Radiation Hybrid Map	1	60832.0	UniSTS

D1S2594

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	113,005,701 - 113,005,915	UniSTS	GRCh37
Build 36	1	112,807,224 - 112,807,438	RGD	NCBI36
Celera	1	111,236,233 - 111,236,447	RGD
Cytogenetic Map	1	p13.2	UniSTS
HuRef	1	110,863,069 - 110,863,283	UniSTS
Stanford-G3 RH Map	1	5232.0	UniSTS

SHGC-75328

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	112,962,026 - 112,962,151	UniSTS	GRCh37
Build 36	1	112,763,549 - 112,763,674	RGD	NCBI36
Celera	1	111,192,582 - 111,192,707	RGD
Cytogenetic Map	1	p13.2	UniSTS
HuRef	1	110,819,126 - 110,819,251	UniSTS
TNG Radiation Hybrid Map	1	60739.0	UniSTS
GeneMap99-GB4 RH Map	1	362.04	UniSTS

RH69499

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	113,002,551 - 113,002,806	UniSTS	GRCh37
Build 36	1	112,804,074 - 112,804,329	RGD	NCBI36
Celera	1	111,233,083 - 111,233,338	RGD
Cytogenetic Map	1	p13.2	UniSTS
HuRef	1	110,859,919 - 110,860,174	UniSTS
GeneMap99-GB4 RH Map	1	360.32	UniSTS

SHGC-75334

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	113,001,197 - 113,001,361	UniSTS	GRCh37
Build 36	1	112,802,720 - 112,802,884	RGD	NCBI36
Celera	1	111,231,730 - 111,231,894	RGD
Cytogenetic Map	1	p13.2	UniSTS
HuRef	1	110,858,566 - 110,858,730	UniSTS
TNG Radiation Hybrid Map	1	60832.0	UniSTS
GeneMap99-GB4 RH Map	1	363.97	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2438	2788	2252	4974	1726	2351	5	624	1934	465	2270	7289	6455	53	3734	1	852	1744	1617	175	1


RefSeq Transcripts	NM_018704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011541781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017001806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047425362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054337703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054337704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054337705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK022544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK023340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK055261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL354760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL359565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL450407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL591521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL598321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC016029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE645464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA238082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB236769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000271277 ⟹ ENSP00000271277

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	112,396,214 - 112,461,164 (+)	Ensembl

Ensembl Acc Id:

ENST00000441739 ⟹ ENSP00000390976

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	112,396,519 - 112,456,306 (+)	Ensembl

Ensembl Acc Id:

ENST00000502356

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	112,414,717 - 112,416,287 (+)	Ensembl

Ensembl Acc Id:

ENST00000607039

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	112,456,818 - 112,463,456 (+)	Ensembl

RefSeq Acc Id:

NM_018704 ⟹ NP_061174

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	112,396,214 - 112,461,164 (+)	NCBI
GRCh37	1	112,938,800 - 113,003,786 (+)	RGD
Build 36	1	112,740,383 - 112,803,739 (+)	NCBI Archive
Celera	1	111,169,369 - 111,234,318 (+)	RGD
HuRef	1	110,795,912 - 110,861,154 (+)	RGD
CHM1_1	1	113,053,632 - 113,118,610 (+)	NCBI
T2T-CHM13v2.0	1	112,408,508 - 112,473,705 (+)	NCBI

Sequence:

show sequence

AGCCGCTGTGGATGGGGAGTGGAGGCGGAGGGGAGCGGAGCCCGGAGCGTCGTGGAAAGCATTGGACACATTTCCACCATGCTAATGGCATTTTAAATATATTTGGCAATTTTCCCAATTTTTTACTG
AAGAAAACTGTAAGTTTATACTTGAGGACTGAAGTGTGACTCTGCCGATTATCAGGCTTTCAAGATGAATCTGGAAAAACTCAGCAAGCCTGAACTCCTGACACTATTTAGTATTCTTGAAGGAGAGC
TTGAAGCAAGGGACCTTGTTATAGAAGCCTTAAAGGCCCAACACAGAGATACTTTCATTGAAGAACGCTATGGAAAATATAACATCAGTGATCCTTTAATGGCTCTACAGAGAGATTTTGAAACACTG
AAGGAGAAAAATGATGGCGAAAAGCAGCCAGTCTGCACAAATCCACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTCCCAGCTGGCTGCTGCTGAGAGCAG
GCACCGAAAGGTGATCCTAGACCTTGAGGAAGAAAGGCAGCGGCATGCACAGGATACGGCTGAAGGAGATGATGTCACCTACATGCTAGAGAAGGAAAGAGAGAGGCTGACTCAACAGTTGGAATTTG
AAAAATCCCAAGTGAAAAAGTTTGAAAAAGAACAGAAGAAGCTCTCTAGTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAG
GCAGCCGAGGAAGGACAGAAGGCAGGAGAGCTGAGCCTGAAATTGGAGAAGGAGAAGAGCCGGGTGAGTAAACTGGAAGAAGAGTTGGCAGCTGAGAGAAAGAGAGGCTTGCAGACTGAGGCCCAGGT
AGAGAAGCAGTTATCAGAGTTTGACATCGAAAGGGAACAACTGAGAGCAAAACTGAACCGAGAAGAGAACCGGACCAAAACCCTGAAAGAAGAAATGGAAAGTTTAAAGAAGATAGTGAAGGACCTAG
AGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTCTGTGTTTTGCCAAACAGAGAGTTTTCCAGCAGAA
AGAACCCATGGGAGCAACATAGCCAAGATGACAAACACTGGGCTGCCTGGTCCTGCCACTCCTGCTTACTCATATGCAAAAACCAATGGCCATTGTGACCCAGAGATACAAACTACCAGGGAGCTGAC
TGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGTCCCC
TCTCTTCCAGTGGGAGCTCACTGTCTCCCAGCAGCACTGCCTCCTCCTCTCTAACATCCTCTCCTTGCTCTTCGCCGGTACTCACTAAGCGTTTATTGGGGTCATCAGCTAGCAGCCCTGGCTACCAG
TCATCGTACCAAGTAGGGATCAACCAACGGTTCCATGCAGCTCGCCACAAATTTCAGTCCCAAGCAGATCAGGACCAACAAGCCAGTGGCCTACAGAGCCCTCCATCCAGGGATTTATCCCCCACCCT
CATAGACAACTCTGCCGCCAAGCAGCTGGCCCGAAACACAGTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGGCACAGACTATC
GAAATCTAGCCAACACTGCCAATCCAAGAGGTGACACAAGCCATTCACCTACTCCAGGGAAAGTGTCCAGTCCCCTGAGCCCCCTGTCTCCAGGAATCAAGTCCCCAACCATCCCCAGAGCTGAGAGA
GGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCTCACCCCTTCTCCATCTGCTACCACTCCATTGACCAAAACTCATTCCCAGGCAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTG
CTCTTCCAATACTGTTGTAGCAAATGGTAAGGATGTTGAGTTACTTTTGCCTACCAGCAGCTAGTCCCTAGGAGGGAGTCTCCACGTTTGACATTCCATCAGATTTCGTCCAAAAGCTCAGTCAGACT
TCTGAGTCAGATTATGTTATTTATTTTGATAGTAGCTGAAACCATCTGTATAATACATTTAGTATATTTCACCATTTTGTATTTTTTTAAGTAGAAACTGAGTAGTTTGGATTTTTATGGCTCACATC
TTTTTACTGAAGCCAGAAAGGCACCTCAAAGATGTCTCAAGCTCAGCAGTCACCGTCATGTTGTGATGAAGAAAGCGAATCACCAGGTGGTGATTTGCTATCTATTTGAGAACTAGAATCACTCAACA
CTCATTTTGAATTATGCAGAAGTGGTTCATGCAGATTTTTATTCCAGATGAACATGTTTTAAAAGTGCCTGAAATATGACTGCCATATGAATGTGATTCTGCAGCAAAAAACACAAAATAGATCATTT
AATTACAGAAAATGAGATCCTCTGTGAATTCTGAATGTTAAAAACCAACACTGCTTTTAATCCTCTTTTAATGTTTTAATACAAGCTTTGTGTTCTGAAACAAGGCTGCATAAGTAGAATGGGAATCC
TTCTAAAGGTGGGTGTGAACTCACCACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTTGGGGTGCTGATTTTCTTGTACTTTTGAAAAATTAAGTCACTCCCAGTTTC
CTGCATAAGTTCTTGAACAGAATGAAATCACATCTCCATTCAAAAAATGTCTCAAGCATCTACTGTTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTACTCATTCTGT
ATAAAAGTTTTGCAAGAGAATGAATTTTTTATTCTGTAATCAAAAAGCAATAACTTGAAATTCACTCTGTAATATTATAGGTCAGTCAGAATTATACAAGTTTTACCAAATTGTTACACTTATTCTCC
AAGCTGCCAGAACCTGGTATCTGTATCTGTAAAACCAAATTAACTTTTGCTTAAATGGGAAGTATACATATATCTGTATAGATACATTACCCCTTTACATGTTTAACATACACACACTTAAACACATA
AATACTAGTGTGATTATATCTTTGGAGTTTGCAATATAGCATAAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGGCTGGGACACAATCAAAGGAGGAATTTTGTCCA
CAGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATCTTCAGTATCATAAAAAGGCAGAGCTGGCCAGGCACAGTGGCTCATGCCTGTAATCTTATCACTTTGGGAGGCTGAGATGGGAGGATCTCTTG
AGACCAGGTGTTCAAGACCAGCCTCATCAACATAGTGAGACCCCATCTCTATTAAAAAAATAAATAGGCAGAGCTAAACTAACCCCAGTGTCACAAAACTCAACTGGTCATATAAATGAGTGAAACAG
GCCTCTCACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTGCGGTGCAAGAATGCTAAA
CCAGGATTACCAGTTCTTCACATTTTTTGAAATCCAAATTTTCATGAGAAACATTCTCATTTTTAAATATCAAGAAGTGATTTTAAAATGTTTAAATGGTGCTGGTTAAACAAACACGTCTGCAGCTG
GATTTAGCTTGCAAGCTGCCAAGTTGCAACCTCTTTCATTCTAGAAACTTCTGTCATTTTCATCATAGCAAGTCTATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCA
AGGTTCATAGAATATAATGGCTATCCCCCTCTGCCAAATAAGACTATCCACAACCCAGCTCAGACACAGTGGTTATATGATTTTGTGTCCATACAGGAGAGGCCTTGGTGTCTTCACATACATTCTCT
GAGCCAACATCTATCCAGCAGCCCTGACCTCCTGCTATAATTTAAGTCTATTTCCTTTTAATCTAATAAGAGTTGATAGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATAT
TGGCAACTCCACAGCTTATAGTTTGATAAAGGCAAATACATGAAAAATAAAAATGCTACTAATGCCCCAAGGTGTCTATCAAAATGATGTAGGGGGTATCTTAAACTGTCCAAGGCAATCATGCATTG
AACTTTATTCCTATGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGGTAATCTTAAAAGTT
GCATTGTGCTCTTCCTTTGTTTTGGGATAGATATATATAGAGAGAGATACTATAAGGAAGTTTATTTCTTAGGAAGTGCACTGAATAATGTATTTCTTTTACAGTGTAATATGGGGGTGGGGATATGC
GAAAGAAATGTGTATTTTTGCTAGTTGCCTACCTTCTGAGATAAATAAGCACAATCTTGCAATGGATCCAATAACCCAGTTAGGTATTATAGATTAGTATTTAAGTTTGCTGTAGATTGTGTGTGTGT
GTGCTAAGTAAAAGTTCCATGATTCACAATTTTAGTATTAACCCATGTTGCAAAAGCTGTTACTGGCCAACAGATTGTAATGATGTGTACCATATAACACAAGCATTAACTAGGCATTAACGTTTGTA
AAGCCAAATATACCATGCAGAAGTCTTCATTTTTATAGCAGACTGCATTAAAACAAGTTAAATCTTGCTGTTTGGGGGGAAATAGTCTTGTTTGTACAAAGTGAAAAATGGCACAATTTGGGCATATT
TTGTTGGGAAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAGGTTAGACTCCATAAGGAACTAAGACATTGATTTTCTTTAGAGTCTTAG
AGCTGGAAAAAGCCTTTACAATAATCCAGTCTGTGATTTTTTAAACCTTTTGGTGGTTCTGGACCTTTTTGAGAATCTTAGAAAAGCCATGGAGTTTATCCCTAGAAAAATGAATATGCCTATATGCA
AAATTTGTTTGATGGCTTCATAGGATCCAAAGACCCTGAAGCCATCCATGGCTCATGTATTTCTGCTTAAGAAAGCATAATCTTGTTCTGCTCTCTCATTTTACAAATGATTAATGCATCCCTTTTCA
ACTACTCCAGCGCTGTTGCTGCTGCAATGTTAGCAAATGCAAGCCAGAGAGAAGCACTTGAAAATCCTTTGATGTCTAAAAAATGTTCAAATAGTGTGGATGTTTACATATCTGAAGTTTTCAGCATT
TAAGCAAATTAATGATCATTTCAACAAATACTAGCATATCCGGTTTCCCTTAATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATTCATAAGG
AGTGCTTCTGATGCTTAGTCCTTGAAATGGAACTTCAACTGTCTTTCAAAACACTGGCTTCAAAATAGGATGTGTTTTCCTAATGAATCAGAAGTGGGCAATGAGCATTGTTCCACAGGAATAATTTT
TAATTTAATTTCTATAAAACTAGTTGAGAAATGAGAGCCTGTCCACCCACCATTTGTGTATCAGTGGCCAATTCATTAGTAAAAATAAAGGAGGGGAAAGGAGA

hide sequence

RefSeq Acc Id:

XM_011541781 ⟹ XP_011540083

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	112,396,214 - 112,461,164 (+)	NCBI

Sequence:

show sequence

CTCCCGGTATTCCCCGAGGAGGCGGCTCCTCATCCTCCGAGGGTCCTCACAGCTACTTTTTGTCCCTCGTCGATTCCCAGCTCCTCAGAAGGGGCTTCCCTCTGACACCCCTCATTCAAAGGCACCTC
CCACCCCGCACCTCAGCCTTGGCGGAGAGGACTCACAGCATTGGACACATTTCCACCATGCTAATGGCATTTTAAATATATTTGGCAATTTTCCCAATTTTTTACTGAAGAAAACTGTAAGTTTATAC
TTGAGGACTGAAGTGTGACTCTGCCGATTATCAGGCTTTCAAGATGAATCTGGAAAAACTCAGCAAGCCTGAACTCCTGACACTATTTAGTATTCTTGAAGGAGAGCTTGAAGCAAGGGACCTTGTTA
TAGAAGCCTTAAAGGCCCAACACAGAGATACTTTCATTGAAGAACGCTATGGAAAATATAACATCAGTGATCCTTTAATGGCTCTACAGAGAGATTTTGAAACACTGAAGGAGAAAAATGATGGCGAA
AAGCAGCCAGTCTGCACAAATCCACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTCCCAGCTGGCTGCTGCTGAGAGCAGGCACCGAAAGGTGATCCTAGA
CCTTGAGGAAGAAAGGCAGCGGCATGCACAGGATACGGCTGAAGGAGATGATGTCACCTACATGCTAGAGAAGGAAAGAGAGAGGCTGACTCAACAGTTGGAATTTGAAAAATCCCAAGTGAAAAAGT
TTGAAAAAGAACAGAAGAAGCTCTCTAGTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAGAAG
GCAGGAGAGCTGAGCCTGAAATTGGAGAAGGAGAAGAGCCGGGTGAGTAAACTGGAAGAAGAGTTGGCAGCTGAGAGAAAGAGAGGCTTGCAGACTGAGGCCCAGGTAGAGAAGCAGTTATCAGAGTT
TGACATCGAAAGGGAACAACTGAGAGCAAAACTGAACCGAGAAGAGAACCGGACCAAAACCCTGAAAGAAGAAATGGAAAGTTTAAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTA
GCCCTAATGAGCAATTGAAGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTCTGTGTTTTGCCAAACAGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCAACATA
GCCAAGATGACAAACACTGGGCTGCCTGGTCCTGCCACTCCTGCTTACTCATATGCAAAAACCAATGGCCATTGTGACCCAGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAA
CCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGTCCCCTCTCTTCCAGTGGGAGCTCAC
TGTCTCCCAGCAGCACTGCCTCCTCCTCTCTAACATCCTCTCCTTGCTCTTCGCCGGTACTCACTAAGCGTTTATTGGGGTCATCAGCTAGCAGCCCTGGCTACCAGTCATCGTACCAAGTAGGGATC
AACCAACGGTTCCATGCAGCTCGCCACAAATTTCAGTCCCAAGCAGATCAGGACCAACAAGCCAGTGGCCTACAGAGCCCTCCATCCAGGGATTTATCCCCCACCCTCATAGACAACTCTGCCGCCAA
GCAGCTGGCCCGAAACACAGTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGGCACAGACTATCGAAATCTAGCCAACACTGCCA
ATCCAAGAGGTGACACAAGCCATTCACCTACTCCAGGGAAAGTGTCCAGTCCCCTGAGCCCCCTGTCTCCAGGAATCAAGTCCCCAACCATCCCCAGAGCTGAGAGAGGAAACCCTCCACCCATCCCA
CCCAAGAAACCTGGCCTCACCCCTTCTCCATCTGCTACCACTCCATTGACCAAAACTCATTCCCAGGCAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGC
AAATGGTAAGGATGTTGAGTTACTTTTGCCTACCAGCAGCTAGTCCCTAGGAGGGAGTCTCCACGTTTGACATTCCATCAGATTTCGTCCAAAAGCTCAGTCAGACTTCTGAGTCAGATTATGTTATT
TATTTTGATAGTAGCTGAAACCATCTGTATAATACATTTAGTATATTTCACCATTTTGTATTTTTTTAAGTAGAAACTGAGTAGTTTGGATTTTTATGGCTCACATCTTTTTACTGAAGCCAGAAAGG
CACCTCAAAGATGTCTCAAGCTCAGCAGTCACCGTCATGTTGTGATGAAGAAAGCGAATCACCAGGTGGTGATTTGCTATCTATTTGAGAACTAGAATCACTCAACACTCATTTTGAATTATGCAGAA
GTGGTTCATGCAGATTTTTATTCCAGATGAACATGTTTTAAAAGTGCCTGAAATATGACTGCCATATGAATGTGATTCTGCAGCAAAAAACACAAAATAGATCATTTAATTACAGAAAATGAGATCCT
CTGTGAATTCTGAATGTTAAAAACCAACACTGCTTTTAATCCTCTTTTAATGTTTTAATACAAGCTTTGTGTTCTGAAACAAGGCTGCATAAGTAGAATGGGAATCCTTCTAAAGGTGGGTGTGAACT
CACCACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTTGGGGTGCTGATTTTCTTGTACTTTTGAAAAATTAAGTCACTCCCAGTTTCCTGCATAAGTTCTTGAACAGA
ATGAAATCACATCTCCATTCAAAAAATGTCTCAAGCATCTACTGTTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTACTCATTCTGTATAAAAGTTTTGCAAGAGAAT
GAATTTTTTATTCTGTAATCAAAAAGCAATAACTTGAAATTCACTCTGTAATATTATAGGTCAGTCAGAATTATACAAGTTTTACCAAATTGTTACACTTATTCTCCAAGCTGCCAGAACCTGGTATC
TGTATCTGTAAAACCAAATTAACTTTTGCTTAAATGGGAAGTATACATATATCTGTATAGATACATTACCCCTTTACATGTTTAACATACACACACTTAAACACATAAATACTAGTGTGATTATATCT
TTGGAGTTTGCAATATAGCATAAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGGCTGGGACACAATCAAAGGAGGAATTTTGTCCACAGGAAGGTGAGGAAATTCCA
AATGAAGCCTAGATCTTCAGTATCATAAAAAGGCAGAGCTGGCCAGGCACAGTGGCTCATGCCTGTAATCTTATCACTTTGGGAGGCTGAGATGGGAGGATCTCTTGAGACCAGGTGTTCAAGACCAG
CCTCATCAACATAGTGAGACCCCATCTCTATTAAAAAAATAAATAGGCAGAGCTAAACTAACCCCAGTGTCACAAAACTCAACTGGTCATATAAATGAGTGAAACAGGCCTCTCACACAAGCGATGTA
AAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTGCGGTGCAAGAATGCTAAACCAGGATTACCAGTTCTTCAC
ATTTTTTGAAATCCAAATTTTCATGAGAAACATTCTCATTTTTAAATATCAAGAAGTGATTTTAAAATGTTTAAATGGTGCTGGTTAAACAAACACGTCTGCAGCTGGATTTAGCTTGCAAGCTGCCA
AGTTGCAACCTCTTTCATTCTAGAAACTTCTGTCATTTTCATCATAGCAAGTCTATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGC
TATCCCCCTCTGCCAAATAAGACTATCCACAACCCAGCTCAGACACAGTGGTTATATGATTTTGTGTCCATACAGGAGAGGCCTTGGTGTCTTCACATACATTCTCTGAGCCAACATCTATCCAGCAG
CCCTGACCTCCTGCTATAATTTAAGTCTATTTCCTTTTAATCTAATAAGAGTTGATAGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCCACAGCTTATAG
TTTGATAAAGGCAAATACATGAAAAATAAAAATGCTACTAATGCCCCAAGGTGTCTATCAAAATGATGTAGGGGGTATCTTAAACTGTCCAAGGCAATCATGCATTGAACTTTATTCCTATGCAGAGC
CAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGGTAATCTTAAAAGTTGCATTGTGCTCTTCCTTTGTT
TTGGGATAGATATATATAGAGAGAGATACTATAAGGAAGTTTATTTCTTAGGAAGTGCACTGAATAATGTATTTCTTTTACAGTGTAATATGGGGGTGGGGATATGCGAAAGAAATGTGTATTTTTGC
TAGTTGCCTACCTTCTGAGATAAATAAGCACAATCTTGCAATGGATCCAATAACCCAGTTAGGTATTATAGATTAGTATTTAAGTTTGCTGTAGATTGTGTGTGTGTGTGCTAAGTAAAAGTTCCATG
ATTCACAATTTTAGTATTAACCCATGTTGCAAAAGCTGTTACTGGCCAACAGATTGTAATGATGTGTACCATATAACACAAGCATTAACTAGGCATTAACGTTTGTAAAGCCAAATATACCATGCAGA
AGTCTTCATTTTTATAGCAGACTGCATTAAAACAAGTTAAATCTTGCTGTTTGGGGGGAAATAGTCTTGTTTGTACAAAGTGAAAAATGGCACAATTTGGGCATATTTTGTTGGGAAGAGGGGGTGGT
GTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAGGTTAGACTCCATAAGGAACTAAGACATTGATTTTCTTTAGAGTCTTAGAGCTGGAAAAAGCCTTTACAA
TAATCCAGTCTGTGATTTTTTAAACCTTTTGGTGGTTCTGGACCTTTTTGAGAATCTTAGAAAAGCCATGGAGTTTATCCCTAGAAAAA

hide sequence

RefSeq Acc Id:

XM_017001806 ⟹ XP_016857295

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	112,391,087 - 112,461,164 (+)	NCBI

Sequence:

show sequence

GCAGATCCAAGCAAGAAGAGAACGTTTAAGGACTGCCCAGCAAATCCTTTGTGGGAACAAATGATGGGAGAAAATGCAGAAATGCAGGGGGCAGTGGAGGGCACACCTTGCCTTCGGCTTCAGCCTGG
TCCGGGGCTTGGAGAGCCCTCTCTGGCTTTCAGACTTTGACCTCCTCATCAACCCCGGGGAGAAGGGGTGGGGTCGGGAAGCGTGAGGAAAAGGAGATAGTGAAGACAAGCCAGAAGAAAGAAAGCAT
TTCTTTTCATCACTTTTCCCATTCATTTCAACTTCTACATCTAGCTCACTCAGCACTCAGCATCTTAATAAGTCCCAGTCCAGTGGGCCACAGCTAGAAGGAGCCTTATGGAGTCCCAGATGTTTAGT
TGGAGCCTAGGACTCAGAGAAGAGGATTGAGCAAGATCTCCCAGGTAGCTAATACTTCCATGTACATCAGATCGCTTGGATACTGACAACCACCTGGTCTTGTAGACAGGAGCTATTATCTCATTTAA
CAAATGAGGAAACAAGTTCAGCATTGGACACATTTCCACCATGCTAATGGCATTTTAAATATATTTGGCAATTTTCCCAATTTTTTACTGAAGAAAACTGTAAGTTTATACTTGAGGACTGAAGTGTG
ACTCTGCCGATTATCAGGCTTTCAAGATGAATCTGGAAAAACTCAGCAAGCCTGAACTCCTGACACTATTTAGTATTCTTGAAGGAGAGCTTGAAGCAAGGGACCTTGTTATAGAAGCCTTAAAGGCC
CAACACAGAGATACTTTCATTGAAGAACGCTATGGAAAATATAACATCAGTGATCCTTTAATGGCTCTACAGAGAGATTTTGAAACACTGAAGGAGAAAAATGATGGCGAAAAGCAGCCAGTCTGCAC
AAATCCACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTCCCAGCTGGCTGCTGCTGAGAGCAGGCACCGAAAGGTGATCCTAGACCTTGAGGAAGAAAGGC
AGCGGCATGCACAGGATACGGCTGAAGGAGATGATGTCACCTACATGCTAGAGAAGGAAAGAGAGAGGCTGACTCAACAGTTGGAATTTGAAAAATCCCAAGTGAAAAAGTTTGAAAAAGAACAGAAG
AAGCTCTCTAGTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAGAAGGCAGGAGAGCTGAGCCT
GAAATTGGAGAAGGAGAAGAGCCGGGTGAGTAAACTGGAAGAAGAGTTGGCAGCTGAGAGAAAGAGAGGCTTGCAGACTGAGGCCCAGGTAGAGAAGCAGTTATCAGAGTTTGACATCGAAAGGGAAC
AACTGAGAGCAAAACTGAACCGAGAAGAGAACCGGACCAAAACCCTGAAAGAAGAAATGGAAAGTTTAAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTG
AAGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTCTGTGTTTTGCCAAACAGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCAACATAGCCAAGATGACAAACAC
TGGGCTGCCTGGTCCTGCCACTCCTGCTTACTCATATGCAAAAACCAATGGCCATTGTGACCCAGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGG
AAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGTCCCCTCTCTTCCAGTGGGAGCTCACTGTCTCCCAGCAGCACT
GCCTCCTCCTCTCTAACATCCTCTCCTTGCTCTTCGCCGGTACTCACTAAGCGTTTATTGGGGTCATCAGCTAGCAGCCCTGGCTACCAGTCATCGTACCAAGTAGGGATCAACCAACGGTTCCATGC
AGCTCGCCACAAATTTCAGTCCCAAGCAGATCAGGACCAACAAGCCAGTGGCCTACAGAGCCCTCCATCCAGGGATTTATCCCCCACCCTCATAGACAACTCTGCCGCCAAGCAGCTGGCCCGAAACA
CAGTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGGCACAGACTATCGAAATCTAGCCAACACTGCCAATCCAAGAGGTGACACA
AGCCATTCACCTACTCCAGGGAAAGTGTCCAGTCCCCTGAGCCCCCTGTCTCCAGGAATCAAGTCCCCAACCATCCCCAGAGCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCT
CACCCCTTCTCCATCTGCTACCACTCCATTGACCAAAACTCATTCCCAGGCAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGTAAGGATGTTG
AGTTACTTTTGCCTACCAGCAGCTAGTCCCTAGGAGGGAGTCTCCACGTTTGACATTCCATCAGATTTCGTCCAAAAGCTCAGTCAGACTTCTGAGTCAGATTATGTTATTTATTTTGATAGTAGCTG
AAACCATCTGTATAATACATTTAGTATATTTCACCATTTTGTATTTTTTTAAGTAGAAACTGAGTAGTTTGGATTTTTATGGCTCACATCTTTTTACTGAAGCCAGAAAGGCACCTCAAAGATGTCTC
AAGCTCAGCAGTCACCGTCATGTTGTGATGAAGAAAGCGAATCACCAGGTGGTGATTTGCTATCTATTTGAGAACTAGAATCACTCAACACTCATTTTGAATTATGCAGAAGTGGTTCATGCAGATTT
TTATTCCAGATGAACATGTTTTAAAAGTGCCTGAAATATGACTGCCATATGAATGTGATTCTGCAGCAAAAAACACAAAATAGATCATTTAATTACAGAAAATGAGATCCTCTGTGAATTCTGAATGT
TAAAAACCAACACTGCTTTTAATCCTCTTTTAATGTTTTAATACAAGCTTTGTGTTCTGAAACAAGGCTGCATAAGTAGAATGGGAATCCTTCTAAAGGTGGGTGTGAACTCACCACAAGCTGAGCTT
TATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTTGGGGTGCTGATTTTCTTGTACTTTTGAAAAATTAAGTCACTCCCAGTTTCCTGCATAAGTTCTTGAACAGAATGAAATCACATCTCCA
TTCAAAAAATGTCTCAAGCATCTACTGTTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTACTCATTCTGTATAAAAGTTTTGCAAGAGAATGAATTTTTTATTCTGTA
ATCAAAAAGCAATAACTTGAAATTCACTCTGTAATATTATAGGTCAGTCAGAATTATACAAGTTTTACCAAATTGTTACACTTATTCTCCAAGCTGCCAGAACCTGGTATCTGTATCTGTAAAACCAA
ATTAACTTTTGCTTAAATGGGAAGTATACATATATCTGTATAGATACATTACCCCTTTACATGTTTAACATACACACACTTAAACACATAAATACTAGTGTGATTATATCTTTGGAGTTTGCAATATA
GCATAAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGGCTGGGACACAATCAAAGGAGGAATTTTGTCCACAGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATCTT
CAGTATCATAAAAAGGCAGAGCTGGCCAGGCACAGTGGCTCATGCCTGTAATCTTATCACTTTGGGAGGCTGAGATGGGAGGATCTCTTGAGACCAGGTGTTCAAGACCAGCCTCATCAACATAGTGA
GACCCCATCTCTATTAAAAAAATAAATAGGCAGAGCTAAACTAACCCCAGTGTCACAAAACTCAACTGGTCATATAAATGAGTGAAACAGGCCTCTCACACAAGCGATGTAAAACAGCTGGGAGCAGT
GGGAGCTGTGGCAAACTAAAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTGCGGTGCAAGAATGCTAAACCAGGATTACCAGTTCTTCACATTTTTTGAAATCCAAA
TTTTCATGAGAAACATTCTCATTTTTAAATATCAAGAAGTGATTTTAAAATGTTTAAATGGTGCTGGTTAAACAAACACGTCTGCAGCTGGATTTAGCTTGCAAGCTGCCAAGTTGCAACCTCTTTCA
TTCTAGAAACTTCTGTCATTTTCATCATAGCAAGTCTATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTATCCCCCTCTGCCAAA
TAAGACTATCCACAACCCAGCTCAGACACAGTGGTTATATGATTTTGTGTCCATACAGGAGAGGCCTTGGTGTCTTCACATACATTCTCTGAGCCAACATCTATCCAGCAGCCCTGACCTCCTGCTAT
AATTTAAGTCTATTTCCTTTTAATCTAATAAGAGTTGATAGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCCACAGCTTATAGTTTGATAAAGGCAAATA
CATGAAAAATAAAAATGCTACTAATGCCCCAAGGTGTCTATCAAAATGATGTAGGGGGTATCTTAAACTGTCCAAGGCAATCATGCATTGAACTTTATTCCTATGCAGAGCCAAAACGAATAGTGTTG
ATAAAATAGCTAAACTTTCTAAACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGGTAATCTTAAAAGTTGCATTGTGCTCTTCCTTTGTTTTGGGATAGATATATAT
AGAGAGAGATACTATAAGGAAGTTTATTTCTTAGGAAGTGCACTGAATAATGTATTTCTTTTACAGTGTAATATGGGGGTGGGGATATGCGAAAGAAATGTGTATTTTTGCTAGTTGCCTACCTTCTG
AGATAAATAAGCACAATCTTGCAATGGATCCAATAACCCAGTTAGGTATTATAGATTAGTATTTAAGTTTGCTGTAGATTGTGTGTGTGTGTGCTAAGTAAAAGTTCCATGATTCACAATTTTAGTAT
TAACCCATGTTGCAAAAGCTGTTACTGGCCAACAGATTGTAATGATGTGTACCATATAACACAAGCATTAACTAGGCATTAACGTTTGTAAAGCCAAATATACCATGCAGAAGTCTTCATTTTTATAG
CAGACTGCATTAAAACAAGTTAAATCTTGCTGTTTGGGGGGAAATAGTCTTGTTTGTACAAAGTGAAAAATGGCACAATTTGGGCATATTTTGTTGGGAAGAGGGGGTGGTGTAGAGGGAGCACTTGA
CTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAGGTTAGACTCCATAAGGAACTAAGACATTGATTTTCTTTAGAGTCTTAGAGCTGGAAAAAGCCTTTACAATAATCCAGTCTGTGATT
TTTTAAACCTTTTGGTGGTTCTGGACCTTTTTGAGAATCTTAGAAAAGCCATGGAGTTTATCCCTAGAAAAA

hide sequence

RefSeq Acc Id:

XM_047425362 ⟹ XP_047281318

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	112,411,707 - 112,461,164 (+)	NCBI

RefSeq Acc Id:

XM_054337703 ⟹ XP_054193678

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	112,408,561 - 112,473,705 (+)	NCBI

RefSeq Acc Id:

XM_054337704 ⟹ XP_054193679

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	112,423,983 - 112,473,705 (+)	NCBI

RefSeq Acc Id:

XM_054337705 ⟹ XP_054193680

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	112,403,339 - 112,473,705 (+)	NCBI


Protein RefSeqs	NP_061174	(Get FASTA)	NCBI Sequence Viewer
	XP_011540083	(Get FASTA)	NCBI Sequence Viewer
	XP_016857295	(Get FASTA)	NCBI Sequence Viewer
	XP_047281318	(Get FASTA)	NCBI Sequence Viewer
	XP_054193678	(Get FASTA)	NCBI Sequence Viewer
	XP_054193679	(Get FASTA)	NCBI Sequence Viewer
	XP_054193680	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH16029	(Get FASTA)	NCBI Sequence Viewer
	BAG51087	(Get FASTA)	NCBI Sequence Viewer
	CAB94870	(Get FASTA)	NCBI Sequence Viewer
	EAW56515	(Get FASTA)	NCBI Sequence Viewer
	EAW56516	(Get FASTA)	NCBI Sequence Viewer
	EAW56517	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000271277
	ENSP00000271277.6
GenBank Protein	Q9P2B4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_061174 ⟸ NM_018704

- UniProtKB:

B3KMS5 (UniProtKB/Swiss-Prot), Q96B40 (UniProtKB/Swiss-Prot), Q9P2B4 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAE
GDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATNKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNRE
ENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNIAKMTNTGLPGPATPAYSYAKTNGHCDPEIQTTRELTAGNNVENQVPPREKSVALAQE
KPVENGGCPVGIETPVPMPSPLSSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSAAKQLARNTVTQVLSRF
TSQQGPIKPVSPNSSPFGTDYRNLANTANPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSATTPLTKTHSQAASLTTAEDLASSCSSNTVVANGKDVELLLPTSS

hide sequence

RefSeq Acc Id:	XP_011540083 ⟸ XM_011541781
- Peptide Label:	isoform X1
- UniProtKB:	B3KMS5 (UniProtKB/Swiss-Prot), Q96B40 (UniProtKB/Swiss-Prot), Q9P2B4 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAE GDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATNKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNRE ENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNIAKMTNTGLPGPATPAYSYAKTNGHCDPEIQTTRELTAGNNVENQVPPREKSVALAQE KPVENGGCPVGIETPVPMPSPLSSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSAAKQLARNTVTQVLSRF TSQQGPIKPVSPNSSPFGTDYRNLANTANPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSATTPLTKTHSQAASLTTAEDLASSCSSNTVVANGKDVELLLPTSS hide sequence

RefSeq Acc Id:	XP_016857295 ⟸ XM_017001806
- Peptide Label:	isoform X1
- UniProtKB:	B3KMS5 (UniProtKB/Swiss-Prot), Q96B40 (UniProtKB/Swiss-Prot), Q9P2B4 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAE GDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATNKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNRE ENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNIAKMTNTGLPGPATPAYSYAKTNGHCDPEIQTTRELTAGNNVENQVPPREKSVALAQE KPVENGGCPVGIETPVPMPSPLSSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSAAKQLARNTVTQVLSRF TSQQGPIKPVSPNSSPFGTDYRNLANTANPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSATTPLTKTHSQAASLTTAEDLASSCSSNTVVANGKDVELLLPTSS hide sequence

Ensembl Acc Id:

ENSP00000390976 ⟸ ENST00000441739

Ensembl Acc Id:

ENSP00000271277 ⟸ ENST00000271277

Protein Domains

Cortactin-binding protein-2 N-terminal

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9P2B4-F1-model_v2	AlphaFold	Q9P2B4	1-639	view protein structure

RGD ID:

6856638

Promoter ID:

EPDNEW_H1484

Type:

initiation region

Name:

CTTNBP2NL_1

Description:

CTTNBP2 N-terminal like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H1485

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	112,396,214 - 112,396,274	EPDNEW

RGD ID:

6856640

Promoter ID:

EPDNEW_H1485

Type:

initiation region

Name:

CTTNBP2NL_2

Description:

CTTNBP2 N-terminal like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H1484

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	112,396,458 - 112,396,518	EPDNEW

RGD ID:

6785008

Promoter ID:

HG_KWN:4149

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

OTTHUMT00000030686, OTTHUMT00000030687, OTTHUMT00000030688, UC001EBY.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	112,739,566 - 112,740,487 (+)	MPROMDB

Database	Acc Id	Source(s)
COSMIC	CTTNBP2NL	COSMIC
Ensembl Genes	ENSG00000143079	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000271277	ENTREZGENE
	ENST00000271277.11	UniProtKB/Swiss-Prot
GTEx	ENSG00000143079	GTEx
HGNC ID	HGNC:25330	ENTREZGENE
Human Proteome Map	CTTNBP2NL	Human Proteome Map
InterPro	Cortactin-Actin_Reg	UniProtKB/Swiss-Prot
	Cortactin-binding_p2_N	UniProtKB/Swiss-Prot
KEGG Report	hsa:55917	UniProtKB/Swiss-Prot
NCBI Gene	55917	ENTREZGENE
OMIM	615100	OMIM
PANTHER	CTTNBP2 N-TERMINAL-LIKE PROTEIN	UniProtKB/Swiss-Prot
	FILAMIN/GPBP-INTERACTING PROTEIN	UniProtKB/Swiss-Prot
Pfam	CortBP2	UniProtKB/Swiss-Prot
PharmGKB	PA142672062	PharmGKB
UniProt	B1AMN7_HUMAN	UniProtKB/TrEMBL
	B3KMS5	ENTREZGENE
	CT2NL_HUMAN	UniProtKB/Swiss-Prot
	Q96B40	ENTREZGENE
	Q9P2B4	ENTREZGENE
UniProt Secondary	B3KMS5	UniProtKB/Swiss-Prot
	Q96B40	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD