QRICH1 (glutamine rich 1) - Rat Genome Database

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Gene: QRICH1 (glutamine rich 1) Homo sapiens
Analyze
Symbol: QRICH1
Name: glutamine rich 1
RGD ID: 1606541
HGNC Page HGNC:24713
Description: Enables DNA binding activity. Involved in several processes, including PERK-mediated unfolded protein response; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress; and positive regulation of DNA-templated transcription. Located in nucleoplasm.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AB-DIP; FLJ20259; glutamine-rich 1; glutamine-rich protein 1; MGC131838; transcriptional regulator QRICH1; VERBRAS
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38349,029,707 - 49,094,373 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl349,029,707 - 49,094,363 (-)EnsemblGRCh38hg38GRCh38
GRCh37349,067,140 - 49,131,806 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,042,146 - 49,106,508 (-)NCBINCBI36Build 36hg18NCBI36
Celera349,023,864 - 49,088,466 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef349,125,007 - 49,190,034 (-)NCBIHuRef
CHM1_1349,019,703 - 49,084,299 (-)NCBICHM1_1
T2T-CHM13v2.0349,057,747 - 49,122,441 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
membrane  (IEA)
nucleoplasm  (IDA)
nucleus  (IDA,IEA)
plasma membrane  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:14702039   PMID:15231748   PMID:15489334   PMID:15923395   PMID:16344560   PMID:16713569   PMID:21873635   PMID:22658674   PMID:22863883   PMID:24453475   PMID:24705354  
PMID:25416956   PMID:25609649   PMID:25921289   PMID:26186194   PMID:26949251   PMID:26972000   PMID:27107012   PMID:28514442   PMID:28692176   PMID:29509190   PMID:29656893   PMID:30021884  
PMID:30281152   PMID:31073040   PMID:31515488   PMID:31617661   PMID:32296183   PMID:32344865   PMID:32416067   PMID:32694731   PMID:33009816   PMID:33226137   PMID:33384352   PMID:33738978  
PMID:33961781   PMID:34687317   PMID:34795231   PMID:34859529   PMID:35013556   PMID:35256949   PMID:35271311   PMID:35439318   PMID:35831314   PMID:35914814   PMID:36215168   PMID:37331002  
PMID:37689310   PMID:37704626   PMID:37827155  


Genomics

Comparative Map Data
QRICH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38349,029,707 - 49,094,373 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl349,029,707 - 49,094,363 (-)EnsemblGRCh38hg38GRCh38
GRCh37349,067,140 - 49,131,806 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,042,146 - 49,106,508 (-)NCBINCBI36Build 36hg18NCBI36
Celera349,023,864 - 49,088,466 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef349,125,007 - 49,190,034 (-)NCBIHuRef
CHM1_1349,019,703 - 49,084,299 (-)NCBICHM1_1
T2T-CHM13v2.0349,057,747 - 49,122,441 (-)NCBIT2T-CHM13v2.0
Qrich1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,394,010 - 108,437,366 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9108,394,005 - 108,437,362 (+)EnsemblGRCm39 Ensembl
GRCm389108,516,982 - 108,560,167 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,516,806 - 108,560,163 (+)EnsemblGRCm38mm10GRCm38
MGSCv379108,419,418 - 108,462,498 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369108,375,206 - 108,403,439 (+)NCBIMGSCv36mm8
Celera9108,126,784 - 108,171,369 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.45NCBI
Qrich1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,095,435 - 118,135,001 (+)NCBIGRCr8
mRatBN7.28109,216,900 - 109,256,472 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,217,376 - 109,261,359 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8114,835,711 - 114,874,722 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08113,035,043 - 113,074,056 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08110,877,683 - 110,916,696 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08117,305,803 - 117,346,738 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,307,339 - 117,346,736 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,650,497 - 116,691,241 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,564,863 - 113,606,732 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,595,328 - 113,614,144 (+)NCBI
Celera8108,513,880 - 108,552,244 (+)NCBICelera
Cytogenetic Map8q32NCBI
Qrich1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,052,174 - 1,091,449 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,052,174 - 1,092,211 (-)NCBIChiLan1.0ChiLan1.0
QRICH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2249,008,529 - 49,072,921 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1349,013,297 - 49,077,676 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0348,954,345 - 49,018,745 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1350,035,676 - 50,098,667 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,035,676 - 50,097,596 (-)Ensemblpanpan1.1panPan2
QRICH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,086,141 - 40,135,810 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,097,149 - 40,135,140 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2040,004,483 - 40,053,996 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02040,443,202 - 40,492,987 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2040,443,208 - 40,493,037 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12039,810,050 - 39,859,593 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02040,213,555 - 40,263,420 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02040,493,861 - 40,542,932 (+)NCBIUU_Cfam_GSD_1.0
Qrich1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560263,993,345 - 64,041,171 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936529753,844 - 801,861 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936529753,842 - 802,405 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
QRICH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,658,642 - 31,714,455 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,663,812 - 31,714,523 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,906,818 - 34,956,134 (-)NCBISscrofa10.2Sscrofa10.2susScr3
QRICH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,430,015 - 10,496,127 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2210,430,774 - 10,478,690 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041156,585,427 - 156,652,252 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Qrich1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,076,106 - 3,123,002 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in QRICH1
94 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_017730.2(QRICH1):c.1338+4611G>T single nucleotide variant Lung cancer [RCV000093590] Chr3:49052251 [GRCh38]
Chr3:49089684 [GRCh37]
Chr3:3p21.31
uncertain significance
GRCh38/hg38 3p21.31-21.2(chr3:45879883-50749922)x4 copy number gain See cases [RCV000133650] Chr3:45879883..50749922 [GRCh38]
Chr3:45921375..50787353 [GRCh37]
Chr3:45896379..50762357 [NCBI36]
Chr3:3p21.31-21.2
pathogenic
NM_198880.3(QRICH1):c.851C>T (p.Pro284Leu) single nucleotide variant Ververi-Brady syndrome [RCV001332178] Chr3:49057349 [GRCh38]
Chr3:49094782 [GRCh37]
Chr3:3p21.31
conflicting interpretations of pathogenicity|uncertain significance
GRCh38/hg38 3p21.31(chr3:48950685-49171381)x4 copy number gain See cases [RCV000143510] Chr3:48950685..49171381 [GRCh38]
Chr3:48988118..49208814 [GRCh37]
Chr3:48963122..49183818 [NCBI36]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.914dup (p.Gly306fs) duplication Intellectual disability [RCV001526610]|Ververi-Brady syndrome [RCV001799766] Chr3:49057285..49057286 [GRCh38]
Chr3:49094718..49094719 [GRCh37]
Chr3:3p21.31
likely pathogenic
GRCh37/hg19 3p22.2-21.31(chr3:37028313-49929220)x3 copy number gain See cases [RCV000240519] Chr3:37028313..49929220 [GRCh37]
Chr3:3p22.2-21.31
likely pathogenic
NM_198880.3(QRICH1):c.1414T>G (p.Ser472Ala) single nucleotide variant not provided [RCV003239044] Chr3:49047171 [GRCh38]
Chr3:49084604 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1355T>C (p.Val452Ala) single nucleotide variant not provided [RCV002284686] Chr3:49047230 [GRCh38]
Chr3:49084663 [GRCh37]
Chr3:3p21.31
uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
NM_198880.3(QRICH1):c.1807G>C (p.Val603Leu) single nucleotide variant not provided [RCV003327848] Chr3:49033208 [GRCh38]
Chr3:49070641 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.250G>A (p.Val84Ile) single nucleotide variant Inborn genetic diseases [RCV003285104] Chr3:49076768 [GRCh38]
Chr3:49114201 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.138_139delinsTT (p.Gln46_Gln47delinsHisTer) indel Ververi-Brady syndrome [RCV000627086] Chr3:49076879..49076880 [GRCh38]
Chr3:49114312..49114313 [GRCh37]
Chr3:3p21.31
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
NM_198880.3(QRICH1):c.1954C>T (p.Arg652Ter) single nucleotide variant Intellectual disability [RCV001194662]|Ververi-Brady syndrome [RCV000627084]|not provided [RCV002225697] Chr3:49032715 [GRCh38]
Chr3:49070148 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1953dup (p.Arg652fs) duplication Ververi-Brady syndrome [RCV000627085] Chr3:49032715..49032716 [GRCh38]
Chr3:49070148..49070149 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1378C>T (p.Gln460Ter) single nucleotide variant Ververi-Brady syndrome [RCV000708566] Chr3:49047207 [GRCh38]
Chr3:49084640 [GRCh37]
Chr3:3p21.31
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29
pathogenic
NM_198880.3(QRICH1):c.1585dup (p.Cys529fs) duplication Ververi-Brady syndrome [RCV001554342] Chr3:49046510..49046511 [GRCh38]
Chr3:49083943..49083944 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1606C>T (p.Arg536Ter) single nucleotide variant Ververi-Brady syndrome [RCV000761208]|not provided [RCV001592947] Chr3:49046490 [GRCh38]
Chr3:49083923 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1306C>G (p.Gln436Glu) single nucleotide variant Ververi-Brady syndrome [RCV000987267] Chr3:49056894 [GRCh38]
Chr3:49094327 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.845dup (p.Leu282fs) duplication Ververi-Brady syndrome [RCV003459146] Chr3:49057354..49057355 [GRCh38]
Chr3:49094787..49094788 [GRCh37]
Chr3:3p21.31
pathogenic
GRCh37/hg19 3p21.31-21.1(chr3:45153770-53878616) copy number gain not provided [RCV000767704] Chr3:45153770..53878616 [GRCh37]
Chr3:3p21.31-21.1
pathogenic
NM_198880.3(QRICH1):c.2166C>T (p.Asp722=) single nucleotide variant QRICH1-related condition [RCV003970750]|not provided [RCV000953350] Chr3:49030617 [GRCh38]
Chr3:49068050 [GRCh37]
Chr3:3p21.31
benign|likely benign
NM_198880.3(QRICH1):c.64dup (p.Val22fs) duplication Ververi-Brady syndrome [RCV000987269] Chr3:49076953..49076954 [GRCh38]
Chr3:49114386..49114387 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1147_1150del (p.Leu383fs) microsatellite Ververi-Brady syndrome [RCV000987268] Chr3:49057050..49057053 [GRCh38]
Chr3:49094483..49094486 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.832_833del (p.Ser278fs) microsatellite Intellectual disability [RCV001194624]|Ververi-Brady syndrome [RCV001507075] Chr3:49057367..49057368 [GRCh38]
Chr3:49094800..49094801 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1812_1813del (p.Glu605fs) deletion Intellectual disability, mild [RCV001195178]|Ververi-Brady syndrome [RCV001507076] Chr3:49033202..49033203 [GRCh38]
Chr3:49070635..49070636 [GRCh37]
Chr3:3p21.31
pathogenic
GRCh37/hg19 3p21.31(chr3:48346677-49630228)x1 copy number loss not provided [RCV001005432] Chr3:48346677..49630228 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.728A>C (p.Gln243Pro) single nucleotide variant Autism spectrum disorder [RCV003127262] Chr3:49057472 [GRCh38]
Chr3:49094905 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1243A>G (p.Ile415Val) single nucleotide variant Inborn genetic diseases [RCV003273310] Chr3:49056957 [GRCh38]
Chr3:49094390 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1149_1150del (p.Phe384fs) microsatellite Inborn genetic diseases [RCV002570672]|Ververi-Brady syndrome [RCV001548773]|not provided [RCV001546229] Chr3:49057050..49057051 [GRCh38]
Chr3:49094483..49094484 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.400C>T (p.Gln134Ter) single nucleotide variant Inborn genetic diseases [RCV003274795] Chr3:49057800 [GRCh38]
Chr3:49095233 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.651dup (p.Ala218fs) duplication not provided [RCV001591594] Chr3:49057548..49057549 [GRCh38]
Chr3:49094981..49094982 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.1362A>G (p.Glu454=) single nucleotide variant not provided [RCV000933386] Chr3:49047223 [GRCh38]
Chr3:49084656 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.1148dup (p.Phe384fs) duplication not provided [RCV001238449] Chr3:49057051..49057052 [GRCh38]
Chr3:49094484..49094485 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.2114T>G (p.Leu705Arg) single nucleotide variant not provided [RCV003108263] Chr3:49032207 [GRCh38]
Chr3:49069640 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2139-17A>C single nucleotide variant not specified [RCV002470108] Chr3:49030661 [GRCh38]
Chr3:49068094 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2207G>A (p.Ser736Asn) single nucleotide variant Ververi-Brady syndrome [RCV001250985] Chr3:49030576 [GRCh38]
Chr3:49068009 [GRCh37]
Chr3:3p21.31
pathogenic|likely pathogenic
NM_198880.3(QRICH1):c.1807G>T (p.Val603Leu) single nucleotide variant Ververi-Brady syndrome [RCV001262345] Chr3:49033208 [GRCh38]
Chr3:49070641 [GRCh37]
Chr3:3p21.31
likely pathogenic|uncertain significance
GRCh37/hg19 3p21.31-21.2(chr3:48807193-51363558)x1 copy number loss not provided [RCV001259686] Chr3:48807193..51363558 [GRCh37]
Chr3:3p21.31-21.2
pathogenic
NM_198880.3(QRICH1):c.770C>T (p.Ser257Phe) single nucleotide variant Ververi-Brady syndrome [RCV001270763] Chr3:49057430 [GRCh38]
Chr3:49094863 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1265C>T (p.Pro422Leu) single nucleotide variant not provided [RCV002280242] Chr3:49056935 [GRCh38]
Chr3:49094368 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.68C>T (p.Pro23Leu) single nucleotide variant Ververi-Brady syndrome [RCV001391660] Chr3:49076950 [GRCh38]
Chr3:49114383 [GRCh37]
Chr3:3p21.31
likely pathogenic
NC_000003.11:g.(?_48507870)_(50340407_?)del deletion Aicardi-Goutieres syndrome 1 [RCV001380369] Chr3:48507870..50340407 [GRCh37]
Chr3:3p21.31
pathogenic
NM_017730.3:c.2207G>A single nucleotide variant Ververi-Brady syndrome [RCV001507074] Chr3:3p21.31 pathogenic
NM_017730.3:c.1812_1813del deletion Ververi-Brady syndrome [RCV001507076] Chr3:3p21.31 pathogenic
NM_198880.3(QRICH1):c.161T>C (p.Val54Ala) single nucleotide variant not provided [RCV001757052] Chr3:49076857 [GRCh38]
Chr3:49114290 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.646G>A (p.Val216Met) single nucleotide variant not specified [RCV002246743] Chr3:49057554 [GRCh38]
Chr3:49094987 [GRCh37]
Chr3:3p21.31
benign
NM_198880.3(QRICH1):c.955C>T (p.Arg319Trp) single nucleotide variant not provided [RCV001763334] Chr3:49057245 [GRCh38]
Chr3:49094678 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.443C>A (p.Ala148Asp) single nucleotide variant not provided [RCV001773009] Chr3:49057757 [GRCh38]
Chr3:49095190 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.199A>G (p.Thr67Ala) single nucleotide variant not provided [RCV001763829] Chr3:49076819 [GRCh38]
Chr3:49114252 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.310-2A>C single nucleotide variant Ververi-Brady syndrome [RCV001800218] Chr3:49057892 [GRCh38]
Chr3:49095325 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.756G>T (p.Met252Ile) single nucleotide variant Ververi-Brady syndrome [RCV001800220] Chr3:49057444 [GRCh38]
Chr3:49094877 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.1180C>G (p.His394Asp) single nucleotide variant Ververi-Brady syndrome [RCV001800224] Chr3:49057020 [GRCh38]
Chr3:49094453 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.1626del (p.Tyr543fs) deletion Ververi-Brady syndrome [RCV001800231] Chr3:49046470 [GRCh38]
Chr3:49083903 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1649A>G (p.Tyr550Cys) single nucleotide variant Ververi-Brady syndrome [RCV001800232]|not provided [RCV002469412] Chr3:49046447 [GRCh38]
Chr3:49083880 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.136del (p.Gln46fs) deletion Ververi-Brady syndrome [RCV001800217]|not provided [RCV003223727] Chr3:49076882 [GRCh38]
Chr3:49114315 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.541C>T (p.Gln181Ter) single nucleotide variant Ververi-Brady syndrome [RCV001800219] Chr3:49057659 [GRCh38]
Chr3:49095092 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1531C>T (p.Arg511Ter) single nucleotide variant Ververi-Brady syndrome [RCV001800229]|not provided [RCV003235598] Chr3:49046565 [GRCh38]
Chr3:49083998 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.823C>T (p.Gln275Ter) single nucleotide variant Ververi-Brady syndrome [RCV001800221] Chr3:49057377 [GRCh38]
Chr3:49094810 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1258C>T (p.Gln420Ter) single nucleotide variant Ververi-Brady syndrome [RCV001800225] Chr3:49056942 [GRCh38]
Chr3:49094375 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1579G>A (p.Gly527Arg) single nucleotide variant Ververi-Brady syndrome [RCV001800230] Chr3:49046517 [GRCh38]
Chr3:49083950 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.1655del (p.Phe552fs) deletion Ververi-Brady syndrome [RCV001800233] Chr3:49046441 [GRCh38]
Chr3:49083874 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.1787-2A>G single nucleotide variant Ververi-Brady syndrome [RCV001800235]|not provided [RCV003319479] Chr3:49033230 [GRCh38]
Chr3:49070663 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1884C>G (p.Phe628Leu) single nucleotide variant Ververi-Brady syndrome [RCV001800237] Chr3:49033131 [GRCh38]
Chr3:49070564 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.2216G>A (p.Trp739Ter) single nucleotide variant Ververi-Brady syndrome [RCV001800239] Chr3:49030567 [GRCh38]
Chr3:49068000 [GRCh37]
Chr3:3p21.31
pathogenic|conflicting interpretations of pathogenicity
NM_198880.3(QRICH1):c.1291A>G (p.Thr431Ala) single nucleotide variant not provided [RCV001760780] Chr3:49056909 [GRCh38]
Chr3:49094342 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.961del (p.Asp321fs) deletion Ververi-Brady syndrome [RCV001800222]|not provided [RCV003328682] Chr3:49057239 [GRCh38]
Chr3:49094672 [GRCh37]
Chr3:3p21.31
pathogenic|likely pathogenic
NM_198880.3(QRICH1):c.985del (p.His329fs) deletion Ververi-Brady syndrome [RCV001800223] Chr3:49057215 [GRCh38]
Chr3:49094648 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1896-2A>G single nucleotide variant Ververi-Brady syndrome [RCV001800238] Chr3:49032775 [GRCh38]
Chr3:49070208 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1292dup (p.Pro432fs) duplication Inborn genetic diseases [RCV002541337]|Ververi-Brady syndrome [RCV001800226] Chr3:49056907..49056908 [GRCh38]
Chr3:49094340..49094341 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1720T>G (p.Tyr574Asp) single nucleotide variant Ververi-Brady syndrome [RCV001800234] Chr3:49044456 [GRCh38]
Chr3:49081889 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.46C>T (p.Arg16Ter) single nucleotide variant Ververi-Brady syndrome [RCV001800216] Chr3:49076972 [GRCh38]
Chr3:49114405 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1304A>G (p.Gln435Arg) single nucleotide variant Ververi-Brady syndrome [RCV001800227]|not provided [RCV002276899] Chr3:49056896 [GRCh38]
Chr3:49094329 [GRCh37]
Chr3:3p21.31
likely pathogenic|uncertain significance
NM_198880.3(QRICH1):c.1578T>C (p.Tyr526=) single nucleotide variant not provided [RCV001815922] Chr3:49046518 [GRCh38]
Chr3:49083951 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.2214C>G (p.Ile738Met) single nucleotide variant Ververi-Brady syndrome [RCV001843861] Chr3:49030569 [GRCh38]
Chr3:49068002 [GRCh37]
Chr3:3p21.31
uncertain significance
GRCh37/hg19 3p21.31(chr3:49060512-49678685) copy number gain not specified [RCV002053349] Chr3:49060512..49678685 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1998G>A (p.Thr666=) single nucleotide variant not provided [RCV002214289] Chr3:49032671 [GRCh38]
Chr3:49070104 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.1786+1G>A single nucleotide variant Ververi-Brady syndrome [RCV002221890] Chr3:49044389 [GRCh38]
Chr3:49081822 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_017730.4(QRICH1):c.1498A>G (p.Arg500Gly) single nucleotide variant not provided [RCV002221942]   uncertain significance
NC_000003.11:g.(?_45435946)_(49137751_?)dup duplication Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [RCV003116297] Chr3:45435946..49137751 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1441G>A (p.Val481Ile) single nucleotide variant not specified [RCV003123503] Chr3:49047144 [GRCh38]
Chr3:49084577 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.887G>A (p.Ser296Asn) single nucleotide variant Ververi-Brady syndrome [RCV003148449] Chr3:49057313 [GRCh38]
Chr3:49094746 [GRCh37]
Chr3:3p21.31
uncertain significance
GRCh37/hg19 3p21.31(chr3:44948482-49115809)x1 copy number loss not provided [RCV002279744] Chr3:44948482..49115809 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1711G>A (p.Asp571Asn) single nucleotide variant Ververi-Brady syndrome [RCV002266607] Chr3:49044465 [GRCh38]
Chr3:49081898 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.418del (p.Gln140fs) deletion Ververi-Brady syndrome [RCV002277749] Chr3:49057782 [GRCh38]
Chr3:49095215 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.2266C>T (p.Arg756Trp) single nucleotide variant Inborn genetic diseases [RCV003164415]|not provided [RCV002281278] Chr3:49030517 [GRCh38]
Chr3:49067950 [GRCh37]
Chr3:3p21.31
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance
NM_198880.3(QRICH1):c.2257A>G (p.Met753Val) single nucleotide variant not provided [RCV002269560] Chr3:49030526 [GRCh38]
Chr3:49067959 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2005C>T (p.Arg669Trp) single nucleotide variant not provided [RCV002285574] Chr3:49032664 [GRCh38]
Chr3:49070097 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2080A>G (p.Asn694Asp) single nucleotide variant not provided [RCV002269618] Chr3:49032241 [GRCh38]
Chr3:49069674 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.476C>A (p.Pro159His) single nucleotide variant Ververi-Brady syndrome [RCV003130378] Chr3:49057724 [GRCh38]
Chr3:49095157 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1245A>G (p.Ile415Met) single nucleotide variant Ververi-Brady syndrome [RCV002470543] Chr3:49056955 [GRCh38]
Chr3:49094388 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2280_2281del (p.Ile760fs) deletion Ververi-Brady syndrome [RCV003233405] Chr3:49030502..49030503 [GRCh38]
Chr3:49067935..49067936 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.114G>T (p.Gly38=) single nucleotide variant not provided [RCV002512227] Chr3:49076904 [GRCh38]
Chr3:49114337 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.519C>A (p.His173Gln) single nucleotide variant Inborn genetic diseases [RCV002689956] Chr3:49057681 [GRCh38]
Chr3:49095114 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.486dup (p.Gln163fs) duplication not provided [RCV002880305] Chr3:49057713..49057714 [GRCh38]
Chr3:49095146..49095147 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.259C>T (p.Gln87Ter) single nucleotide variant Inborn genetic diseases [RCV002661581] Chr3:49076759 [GRCh38]
Chr3:49114192 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.1214C>T (p.Thr405Met) single nucleotide variant Inborn genetic diseases [RCV002951232] Chr3:49056986 [GRCh38]
Chr3:49094419 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1315C>T (p.Gln439Ter) single nucleotide variant not provided [RCV002828871] Chr3:49056885 [GRCh38]
Chr3:49094318 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.190A>G (p.Thr64Ala) single nucleotide variant Inborn genetic diseases [RCV002812475] Chr3:49076828 [GRCh38]
Chr3:49114261 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.41A>G (p.Tyr14Cys) single nucleotide variant Inborn genetic diseases [RCV002668779] Chr3:49076977 [GRCh38]
Chr3:49114410 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2248A>G (p.Met750Val) single nucleotide variant Inborn genetic diseases [RCV002988161] Chr3:49030535 [GRCh38]
Chr3:49067968 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.456G>C (p.Gln152His) single nucleotide variant Inborn genetic diseases [RCV002807432] Chr3:49057744 [GRCh38]
Chr3:49095177 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.325C>T (p.Gln109Ter) single nucleotide variant Inborn genetic diseases [RCV002965254] Chr3:49057875 [GRCh38]
Chr3:49095308 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.59G>A (p.Arg20Gln) single nucleotide variant Inborn genetic diseases [RCV002718724] Chr3:49076959 [GRCh38]
Chr3:49114392 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.186A>G (p.Ile62Met) single nucleotide variant not provided [RCV003156641] Chr3:49076832 [GRCh38]
Chr3:49114265 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.292C>T (p.Gln98Ter) single nucleotide variant Ververi-Brady syndrome [RCV003133745] Chr3:49076726 [GRCh38]
Chr3:49114159 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.598G>A (p.Val200Met) single nucleotide variant Ververi-Brady syndrome [RCV003227099] Chr3:49057602 [GRCh38]
Chr3:49095035 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1981C>T (p.Pro661Ser) single nucleotide variant Ververi-Brady syndrome [RCV003135194] Chr3:49032688 [GRCh38]
Chr3:49070121 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.701G>A (p.Arg234Gln) single nucleotide variant Ververi-Brady syndrome [RCV003135195] Chr3:49057499 [GRCh38]
Chr3:49094932 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1965GAA[1] (p.Lys656del) microsatellite not provided [RCV003321140] Chr3:49032699..49032701 [GRCh38]
Chr3:49070132..49070134 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1828G>T (p.Glu610Ter) single nucleotide variant Inborn genetic diseases [RCV003356943] Chr3:49033187 [GRCh38]
Chr3:49070620 [GRCh37]
Chr3:3p21.31
pathogenic
NM_198880.3(QRICH1):c.455A>C (p.Gln152Pro) single nucleotide variant Inborn genetic diseases [RCV003356740] Chr3:49057745 [GRCh38]
Chr3:49095178 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.623G>A (p.Gly208Asp) single nucleotide variant not provided [RCV003332680] Chr3:49057577 [GRCh38]
Chr3:49095010 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.697G>C (p.Glu233Gln) single nucleotide variant QRICH1-related condition [RCV003394448] Chr3:49057503 [GRCh38]
Chr3:49094936 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1234A>T (p.Thr412Ser) single nucleotide variant Inborn genetic diseases [RCV003369903] Chr3:49056966 [GRCh38]
Chr3:49094399 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2264C>T (p.Thr755Met) single nucleotide variant Inborn genetic diseases [RCV003363224] Chr3:49030519 [GRCh38]
Chr3:49067952 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.60G>A (p.Arg20=) single nucleotide variant not provided [RCV003433590] Chr3:49076958 [GRCh38]
Chr3:49114391 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.2229G>C (p.Gln743His) single nucleotide variant QRICH1-related condition [RCV003404235] Chr3:49030554 [GRCh38]
Chr3:49067987 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1964A>G (p.Lys655Arg) single nucleotide variant not provided [RCV003437838] Chr3:49032705 [GRCh38]
Chr3:49070138 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.743G>A (p.Arg248His) single nucleotide variant QRICH1-related condition [RCV003404644] Chr3:49057457 [GRCh38]
Chr3:49094890 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.1479A>G (p.Leu493=) single nucleotide variant not provided [RCV003433588] Chr3:49047106 [GRCh38]
Chr3:49084539 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.2066C>G (p.Ala689Gly) single nucleotide variant not provided [RCV003457111] Chr3:49032255 [GRCh38]
Chr3:49069688 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.157A>G (p.Met53Val) single nucleotide variant not provided [RCV003433589] Chr3:49076861 [GRCh38]
Chr3:49114294 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.608A>G (p.Gln203Arg) single nucleotide variant not provided [RCV003443774] Chr3:49057592 [GRCh38]
Chr3:49095025 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2076G>A (p.Thr692=) single nucleotide variant not provided [RCV003437837] Chr3:49032245 [GRCh38]
Chr3:49069678 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.336G>T (p.Pro112=) single nucleotide variant not provided [RCV003437840] Chr3:49057864 [GRCh38]
Chr3:49095297 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.1517-8C>T single nucleotide variant QRICH1-related condition [RCV003929128]|not provided [RCV003437839] Chr3:49046587 [GRCh38]
Chr3:49084020 [GRCh37]
Chr3:3p21.31
benign|likely benign
NM_198880.3(QRICH1):c.1234del (p.Thr412fs) deletion Ververi-Brady syndrome [RCV003388853] Chr3:49056966 [GRCh38]
Chr3:49094399 [GRCh37]
Chr3:3p21.31
likely pathogenic
NM_198880.3(QRICH1):c.556C>A (p.Pro186Thr) single nucleotide variant not provided [RCV003442698] Chr3:49057644 [GRCh38]
Chr3:49095077 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.2159G>A (p.Arg720Gln) single nucleotide variant Ververi-Brady syndrome [RCV003594711] Chr3:49030624 [GRCh38]
Chr3:49068057 [GRCh37]
Chr3:3p21.31
likely pathogenic
GRCh37/hg19 3p21.31(chr3:49112665-49175315)x1 copy number loss not specified [RCV003986428] Chr3:49112665..49175315 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_198880.3(QRICH1):c.427G>A (p.Ala143Thr) single nucleotide variant QRICH1-related condition [RCV003934775] Chr3:49057773 [GRCh38]
Chr3:49095206 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.2265G>A (p.Thr755=) single nucleotide variant QRICH1-related condition [RCV003932235] Chr3:49030518 [GRCh38]
Chr3:49067951 [GRCh37]
Chr3:3p21.31
benign
NM_198880.3(QRICH1):c.729A>G (p.Gln243=) single nucleotide variant QRICH1-related condition [RCV003951723] Chr3:49057471 [GRCh38]
Chr3:49094904 [GRCh37]
Chr3:3p21.31
likely benign
NM_198880.3(QRICH1):c.372C>T (p.Thr124=) single nucleotide variant QRICH1-related condition [RCV003944375] Chr3:49057828 [GRCh38]
Chr3:49095261 [GRCh37]
Chr3:3p21.31
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2288
Count of miRNA genes:865
Interacting mature miRNAs:1031
Transcripts:ENST00000357496, ENST00000395443, ENST00000411682, ENST00000424300, ENST00000430979, ENST00000437939, ENST00000450685, ENST00000469910, ENST00000477021, ENST00000479449, ENST00000489642, ENST00000498392, ENST00000498440
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH80406  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37349,114,054 - 49,114,292UniSTSGRCh37
Build 36349,089,058 - 49,089,296RGDNCBI36
Celera349,070,813 - 49,071,051RGD
Cytogenetic Map3p21.31UniSTS
HuRef349,171,537 - 49,171,775UniSTS
RH93145  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37349,124,161 - 49,124,329UniSTSGRCh37
Build 36349,099,165 - 49,099,333RGDNCBI36
Cytogenetic Map3p21.31UniSTS
HuRef349,181,642 - 49,181,810UniSTS
GeneMap99-GB4 RH Map3157.44UniSTS
RH122928  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37349,130,138 - 49,130,437UniSTSGRCh37
Build 36349,105,142 - 49,105,441RGDNCBI36
Celera349,087,100 - 49,087,399RGD
Cytogenetic Map3p21.31UniSTS
HuRef349,188,668 - 49,188,967UniSTS
TNG Radiation Hybrid Map330995.0UniSTS
D3S2759E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37349,067,892 - 49,067,972UniSTSGRCh37
Build 36349,042,896 - 49,042,976RGDNCBI36
Celera349,024,614 - 49,024,694RGD
Cytogenetic Map3p21.31UniSTS
HuRef349,125,757 - 49,125,837UniSTS
D3S4029  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37349,099,366 - 49,099,490UniSTSGRCh37
Build 36349,074,370 - 49,074,494RGDNCBI36
Celera349,056,074 - 49,056,198RGD
HuRef349,156,897 - 49,157,021UniSTS
G16539  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37349,105,879 - 49,106,100UniSTSGRCh37
GRCh376140,563,329 - 140,563,382UniSTSGRCh37
Build 36349,080,883 - 49,081,104RGDNCBI36
Celera6141,304,198 - 141,304,251RGD
HuRef349,163,407 - 49,163,629UniSTS
HuRef6138,126,593 - 138,126,646UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2430 2626 1661 563 1765 405 4353 2051 3125 392 1444 1605 171 1204 2786 4
Low 8 364 65 61 186 60 3 146 607 27 16 8 4 1 2 1 2
Below cutoff 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001320580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_017730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC135506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC137630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK000266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK022524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK093259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK124205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK292536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW673597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC098375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC130340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC130342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI459089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA238657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA241522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA388875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB062061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB062422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB062828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF584068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY006215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000357496   ⟹   ENSP00000350094
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,932 - 49,094,062 (-)Ensembl
RefSeq Acc Id: ENST00000395443   ⟹   ENSP00000378830
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,707 - 49,094,071 (-)Ensembl
RefSeq Acc Id: ENST00000411682   ⟹   ENSP00000412870
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,030,265 - 49,094,363 (-)Ensembl
RefSeq Acc Id: ENST00000424300   ⟹   ENSP00000412890
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,030,212 - 49,093,611 (-)Ensembl
RefSeq Acc Id: ENST00000430979   ⟹   ENSP00000405505
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,076,873 - 49,094,051 (-)Ensembl
RefSeq Acc Id: ENST00000437939   ⟹   ENSP00000416133
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,076,707 - 49,094,071 (-)Ensembl
RefSeq Acc Id: ENST00000450685   ⟹   ENSP00000413051
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,045,942 - 49,094,348 (-)Ensembl
RefSeq Acc Id: ENST00000469910
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,032,619 - 49,033,168 (-)Ensembl
RefSeq Acc Id: ENST00000477021
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,032,183 - 49,033,201 (-)Ensembl
RefSeq Acc Id: ENST00000479449
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,033,083 - 49,057,875 (-)Ensembl
RefSeq Acc Id: ENST00000489642
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,030,375 - 49,044,442 (-)Ensembl
RefSeq Acc Id: ENST00000498392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,931 - 49,033,830 (-)Ensembl
RefSeq Acc Id: ENST00000498440
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,033,047 - 49,046,458 (-)Ensembl
RefSeq Acc Id: ENST00000703871   ⟹   ENSP00000515516
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,788 - 49,093,620 (-)Ensembl
RefSeq Acc Id: ENST00000703872   ⟹   ENSP00000515517
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,909 - 49,094,071 (-)Ensembl
RefSeq Acc Id: ENST00000703873   ⟹   ENSP00000515518
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,030,160 - 49,094,062 (-)Ensembl
RefSeq Acc Id: ENST00000703938   ⟹   ENSP00000515569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,839 - 49,093,976 (-)Ensembl
RefSeq Acc Id: ENST00000703939   ⟹   ENSP00000515570
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,896 - 49,094,071 (-)Ensembl
RefSeq Acc Id: ENST00000703940   ⟹   ENSP00000515571
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,903 - 49,094,071 (-)Ensembl
RefSeq Acc Id: ENST00000703941   ⟹   ENSP00000515572
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,029,992 - 49,094,071 (-)Ensembl
RefSeq Acc Id: ENST00000703942   ⟹   ENSP00000515573
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,030,107 - 49,093,608 (-)Ensembl
RefSeq Acc Id: ENST00000703943   ⟹   ENSP00000515574
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl349,030,392 - 49,094,071 (-)Ensembl
RefSeq Acc Id: NM_001320580   ⟹   NP_001307509
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,093,610 (-)NCBI
CHM1_1349,019,701 - 49,083,860 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,121,678 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320581   ⟹   NP_001307510
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,093,610 (-)NCBI
CHM1_1349,019,701 - 49,083,860 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,121,678 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320582   ⟹   NP_001307511
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,093,610 (-)NCBI
CHM1_1349,019,701 - 49,083,860 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,121,678 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320583   ⟹   NP_001307512
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,093,610 (-)NCBI
CHM1_1349,019,701 - 49,083,860 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,121,678 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320584   ⟹   NP_001307513
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,094,373 (-)NCBI
CHM1_1349,019,701 - 49,084,601 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,122,441 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320585   ⟹   NP_001307514
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,094,373 (-)NCBI
CHM1_1349,019,701 - 49,084,601 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,122,441 (-)NCBI
Sequence:
RefSeq Acc Id: NM_017730   ⟹   NP_060200
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,094,071 (-)NCBI
GRCh37349,067,140 - 49,131,504 (-)NCBI
Build 36349,042,146 - 49,106,508 (-)NCBI Archive
Celera349,023,864 - 49,088,466 (-)RGD
HuRef349,125,007 - 49,190,034 (-)ENTREZGENE
CHM1_1349,019,701 - 49,084,601 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,122,139 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198880   ⟹   NP_942581
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,094,071 (-)NCBI
GRCh37349,067,140 - 49,131,504 (-)NCBI
Build 36349,042,146 - 49,106,508 (-)NCBI Archive
Celera349,023,864 - 49,088,466 (-)RGD
HuRef349,125,007 - 49,190,034 (-)ENTREZGENE
CHM1_1349,019,701 - 49,084,601 (-)NCBI
T2T-CHM13v2.0349,057,747 - 49,122,139 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533863   ⟹   XP_011532165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,094,071 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047448399   ⟹   XP_047304355
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,029,707 - 49,093,610 (-)NCBI
RefSeq Acc Id: XM_054347004   ⟹   XP_054202979
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0349,057,747 - 49,122,341 (-)NCBI
RefSeq Acc Id: XM_054347005   ⟹   XP_054202980
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0349,057,747 - 49,121,672 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001307509 (Get FASTA)   NCBI Sequence Viewer  
  NP_001307510 (Get FASTA)   NCBI Sequence Viewer  
  NP_001307511 (Get FASTA)   NCBI Sequence Viewer  
  NP_001307512 (Get FASTA)   NCBI Sequence Viewer  
  NP_001307513 (Get FASTA)   NCBI Sequence Viewer  
  NP_001307514 (Get FASTA)   NCBI Sequence Viewer  
  NP_060200 (Get FASTA)   NCBI Sequence Viewer  
  NP_942581 (Get FASTA)   NCBI Sequence Viewer  
  XP_011532165 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304355 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202979 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202980 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH00978 (Get FASTA)   NCBI Sequence Viewer  
  AAH98375 (Get FASTA)   NCBI Sequence Viewer  
  AAI10856 (Get FASTA)   NCBI Sequence Viewer  
  AAI30341 (Get FASTA)   NCBI Sequence Viewer  
  AAI30343 (Get FASTA)   NCBI Sequence Viewer  
  BAA91042 (Get FASTA)   NCBI Sequence Viewer  
  BAB14076 (Get FASTA)   NCBI Sequence Viewer  
  BAB85047 (Get FASTA)   NCBI Sequence Viewer  
  BAF85225 (Get FASTA)   NCBI Sequence Viewer  
  CCQ43565 (Get FASTA)   NCBI Sequence Viewer  
  EAW64948 (Get FASTA)   NCBI Sequence Viewer  
  EAW64949 (Get FASTA)   NCBI Sequence Viewer  
  EAW64950 (Get FASTA)   NCBI Sequence Viewer  
  EAW64951 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000350094
  ENSP00000350094.2
  ENSP00000378830
  ENSP00000378830.2
  ENSP00000405505.1
  ENSP00000412870
  ENSP00000412870.2
  ENSP00000412890
  ENSP00000412890.1
  ENSP00000416133.1
  ENSP00000515516
  ENSP00000515516.1
  ENSP00000515517.1
  ENSP00000515518.1
  ENSP00000515569.1
  ENSP00000515570.1
  ENSP00000515571.1
  ENSP00000515572.1
  ENSP00000515573
  ENSP00000515573.1
  ENSP00000515574.1
GenBank Protein Q2TAL8 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_060200   ⟸   NM_017730
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_942581   ⟸   NM_198880
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011532165   ⟸   XM_011533863
- Peptide Label: isoform X1
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307513   ⟸   NM_001320584
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307514   ⟸   NM_001320585
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307512   ⟸   NM_001320583
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307509   ⟸   NM_001320580
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307511   ⟸   NM_001320582
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307510   ⟸   NM_001320581
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   A1L3Z9 (UniProtKB/TrEMBL),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000416133   ⟸   ENST00000437939
RefSeq Acc Id: ENSP00000412890   ⟸   ENST00000424300
RefSeq Acc Id: ENSP00000413051   ⟸   ENST00000450685
RefSeq Acc Id: ENSP00000412870   ⟸   ENST00000411682
RefSeq Acc Id: ENSP00000405505   ⟸   ENST00000430979
RefSeq Acc Id: ENSP00000378830   ⟸   ENST00000395443
RefSeq Acc Id: ENSP00000350094   ⟸   ENST00000357496
RefSeq Acc Id: XP_047304355   ⟸   XM_047448399
- Peptide Label: isoform X1
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A1L3Z9 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000515518   ⟸   ENST00000703873
RefSeq Acc Id: ENSP00000515517   ⟸   ENST00000703872
RefSeq Acc Id: ENSP00000515571   ⟸   ENST00000703940
RefSeq Acc Id: ENSP00000515569   ⟸   ENST00000703938
RefSeq Acc Id: ENSP00000515574   ⟸   ENST00000703943
RefSeq Acc Id: ENSP00000515570   ⟸   ENST00000703939
RefSeq Acc Id: ENSP00000515572   ⟸   ENST00000703941
RefSeq Acc Id: ENSP00000515516   ⟸   ENST00000703871
RefSeq Acc Id: ENSP00000515573   ⟸   ENST00000703942
RefSeq Acc Id: XP_054202979   ⟸   XM_054347004
- Peptide Label: isoform X1
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A1L3Z9 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054202980   ⟸   XM_054347005
- Peptide Label: isoform X1
- UniProtKB: Q7L621 (UniProtKB/Swiss-Prot),   Q4G0F7 (UniProtKB/Swiss-Prot),   Q2TAL8 (UniProtKB/Swiss-Prot),   Q8TEA5 (UniProtKB/Swiss-Prot),   A1L3Z7 (UniProtKB/TrEMBL),   A0A024R2T7 (UniProtKB/TrEMBL),   A1L3Z9 (UniProtKB/TrEMBL),   A0A994J6Q4 (UniProtKB/TrEMBL)
Protein Domains
CARD   DUF3504

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q2TAL8-F1-model_v2 AlphaFold Q2TAL8 1-776 view protein structure

Promoters
RGD ID:6801495
Promoter ID:HG_KWN:44986
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:OTTHUMT00000345670,   OTTHUMT00000345676,   OTTHUMT00000345677
Position:
Human AssemblyChrPosition (strand)Source
Build 36349,044,771 - 49,045,271 (-)MPROMDB
RGD ID:6801497
Promoter ID:HG_KWN:44989
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Lymphoblastoid
Transcripts:OTTHUMT00000345678
Position:
Human AssemblyChrPosition (strand)Source
Build 36349,069,789 - 49,070,289 (-)MPROMDB
RGD ID:6864374
Promoter ID:EPDNEW_H5352
Type:initiation region
Name:QRICH1_1
Description:glutamine rich 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5353  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,094,071 - 49,094,131EPDNEW
RGD ID:6864376
Promoter ID:EPDNEW_H5353
Type:initiation region
Name:QRICH1_2
Description:glutamine rich 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5352  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38349,094,363 - 49,094,423EPDNEW
RGD ID:6801496
Promoter ID:HG_KWN:44992
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_017730,   OTTHUMT00000345669,   OTTHUMT00000345674,   OTTHUMT00000345679,   OTTHUMT00000345680,   OTTHUMT00000345681,   OTTHUMT00000345682,   UC010HKQ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36349,105,516 - 49,107,047 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24713 AgrOrtholog
COSMIC QRICH1 COSMIC
Ensembl Genes ENSG00000198218 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000357496 ENTREZGENE
  ENST00000357496.6 UniProtKB/Swiss-Prot
  ENST00000395443 ENTREZGENE
  ENST00000395443.7 UniProtKB/Swiss-Prot
  ENST00000411682 ENTREZGENE
  ENST00000411682.2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENST00000424300 ENTREZGENE
  ENST00000424300.5 UniProtKB/Swiss-Prot
  ENST00000430979.1 UniProtKB/TrEMBL
  ENST00000437939.5 UniProtKB/TrEMBL
  ENST00000703871 ENTREZGENE
  ENST00000703871.1 UniProtKB/Swiss-Prot
  ENST00000703872.1 UniProtKB/TrEMBL
  ENST00000703873.1 UniProtKB/TrEMBL
  ENST00000703938.1 UniProtKB/TrEMBL
  ENST00000703939.1 UniProtKB/TrEMBL
  ENST00000703940.1 UniProtKB/TrEMBL
  ENST00000703941.1 UniProtKB/TrEMBL
  ENST00000703942 ENTREZGENE
  ENST00000703942.1 UniProtKB/Swiss-Prot
  ENST00000703943.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.533.10 UniProtKB/TrEMBL
GTEx ENSG00000198218 GTEx
HGNC ID HGNC:24713 ENTREZGENE
Human Proteome Map QRICH1 Human Proteome Map
InterPro CARD UniProtKB/TrEMBL
  DEATH-like_dom UniProtKB/TrEMBL
  DUF3504 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:54870 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 54870 ENTREZGENE
OMIM 617387 OMIM
PANTHER TRANSCRIPTIONAL REGULATOR QRICH1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER MYM-TYPE PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3504 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142671106 PharmGKB
PRINTS F138DOMAIN UniProtKB/TrEMBL
PROSITE CARD UniProtKB/TrEMBL
Superfamily-SCOP beta-sandwich domain of Sec23/24 UniProtKB/TrEMBL
  SSF47986 UniProtKB/TrEMBL
UniProt A0A024R2T7 ENTREZGENE
  A0A994J424_HUMAN UniProtKB/TrEMBL
  A0A994J457_HUMAN UniProtKB/TrEMBL
  A0A994J492_HUMAN UniProtKB/TrEMBL
  A0A994J4K3_HUMAN UniProtKB/TrEMBL
  A0A994J4P1_HUMAN UniProtKB/TrEMBL
  A0A994J6Q4 ENTREZGENE, UniProtKB/TrEMBL
  A0A994J751_HUMAN UniProtKB/TrEMBL
  A1L3Z7 ENTREZGENE
  A1L3Z9 ENTREZGENE, UniProtKB/TrEMBL
  C9JAL2_HUMAN UniProtKB/TrEMBL
  C9JIA8_HUMAN UniProtKB/TrEMBL
  L8E8D2_HUMAN UniProtKB/TrEMBL
  Q2TAL8 ENTREZGENE
  Q4G0F7 ENTREZGENE
  Q7L621 ENTREZGENE
  Q8TEA5 ENTREZGENE
  QRIC1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A0A024R2T7 UniProtKB/TrEMBL
  A1L3Z7 UniProtKB/TrEMBL
  Q4G0F7 UniProtKB/Swiss-Prot
  Q7L621 UniProtKB/Swiss-Prot
  Q8TEA5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-02 QRICH1  glutamine rich 1    glutamine-rich 1  Symbol and/or name change 5135510 APPROVED