Qrich1 (glutamine rich 1) - Rat Genome Database

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Gene: Qrich1 (glutamine rich 1) Heterocephalus glaber
Analyze
Symbol: Qrich1
Name: glutamine rich 1
RGD ID: 18903594
Description: ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); integrated stress response signaling (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); autism spectrum disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Glutamine-rich protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,076,106 - 3,123,002 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:21993625  


Genomics

Comparative Map Data
Qrich1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,076,106 - 3,123,002 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
QRICH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38349,029,707 - 49,094,373 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl349,029,707 - 49,094,363 (-)EnsemblGRCh38hg38GRCh38
GRCh37349,067,140 - 49,131,806 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,042,146 - 49,106,508 (-)NCBINCBI36Build 36hg18NCBI36
Celera349,023,864 - 49,088,466 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef349,125,007 - 49,190,034 (-)NCBIHuRef
CHM1_1349,019,703 - 49,084,299 (-)NCBICHM1_1
T2T-CHM13v2.0349,057,747 - 49,122,441 (-)NCBIT2T-CHM13v2.0
Qrich1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,394,010 - 108,437,366 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9108,394,005 - 108,437,362 (+)EnsemblGRCm39 Ensembl
GRCm389108,516,982 - 108,560,167 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,516,806 - 108,560,163 (+)EnsemblGRCm38mm10GRCm38
MGSCv379108,419,418 - 108,462,498 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369108,375,206 - 108,403,439 (+)NCBIMGSCv36mm8
Celera9108,126,784 - 108,171,369 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.45NCBI
Qrich1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,095,435 - 118,135,001 (+)NCBIGRCr8
mRatBN7.28109,216,900 - 109,256,472 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,217,376 - 109,261,359 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8114,835,711 - 114,874,722 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08113,035,043 - 113,074,056 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08110,877,683 - 110,916,696 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08117,305,803 - 117,346,738 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,307,339 - 117,346,736 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,650,497 - 116,691,241 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,564,863 - 113,606,732 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,595,328 - 113,614,144 (+)NCBI
Celera8108,513,880 - 108,552,244 (+)NCBICelera
Cytogenetic Map8q32NCBI
Qrich1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,052,174 - 1,091,449 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,052,174 - 1,092,211 (-)NCBIChiLan1.0ChiLan1.0
QRICH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2249,008,529 - 49,072,921 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1349,013,297 - 49,077,676 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0348,954,345 - 49,018,745 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1350,035,676 - 50,098,667 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,035,676 - 50,097,596 (-)Ensemblpanpan1.1panPan2
QRICH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,086,141 - 40,135,810 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,097,149 - 40,135,140 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2040,004,483 - 40,053,996 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02040,443,202 - 40,492,987 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2040,443,208 - 40,493,037 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12039,810,050 - 39,859,593 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02040,213,555 - 40,263,420 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02040,493,861 - 40,542,932 (+)NCBIUU_Cfam_GSD_1.0
Qrich1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560263,993,345 - 64,041,171 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936529753,844 - 801,861 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936529753,842 - 802,405 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IMPDH2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,658,642 - 31,714,455 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,663,812 - 31,714,523 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,906,818 - 34,956,134 (-)NCBISscrofa10.2Sscrofa10.2susScr3
QRICH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,430,015 - 10,496,127 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2210,430,774 - 10,478,690 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041156,585,427 - 156,652,252 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004833990   ⟹   XP_004834047
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,122,743 (-)NCBI
RefSeq Acc Id: XM_004833991   ⟹   XP_004834048
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,122,268 (-)NCBI
RefSeq Acc Id: XM_004833992   ⟹   XP_004834049
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,122,268 (-)NCBI
RefSeq Acc Id: XM_004833993   ⟹   XP_004834050
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,123,002 (-)NCBI
RefSeq Acc Id: XM_004833994   ⟹   XP_004834051
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,113,470 (-)NCBI
RefSeq Acc Id: XM_013069966   ⟹   XP_012925420
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,122,743 (-)NCBI
RefSeq Acc Id: XM_021259597   ⟹   XP_021115256
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247303,076,106 - 3,122,743 (-)NCBI
RefSeq Acc Id: XP_004834050   ⟸   XM_004833993
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004834047   ⟸   XM_004833990
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021115256   ⟸   XM_021259597
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012925420   ⟸   XM_013069966
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004834049   ⟸   XM_004833992
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004834048   ⟸   XM_004833991
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004834051   ⟸   XM_004833994
- UniProtKB: G5BZV2 (UniProtKB/TrEMBL),   A0AAX6NPC3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000013818 ENTREZGENE
Ensembl Transcript ENSHGLT00000019461 ENTREZGENE
InterPro DUF3504 UniProtKB/TrEMBL
  ZnF_MYMT-QRICH1 UniProtKB/TrEMBL
NCBI Gene Qrich1 ENTREZGENE
PANTHER TRANSCRIPTIONAL REGULATOR QRICH1 UniProtKB/TrEMBL
  ZINC FINGER MYM-TYPE PROTEIN UniProtKB/TrEMBL
Pfam DUF3504 UniProtKB/TrEMBL
UniProt A0AAX6NPC3 ENTREZGENE, UniProtKB/TrEMBL
  G5BZV2 ENTREZGENE, UniProtKB/TrEMBL