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Gene: SRRM3 (serine/arginine repetitive matrix 3) Homo sapiens

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Symbol:

SRRM3

Name:

serine/arginine repetitive matrix 3

RGD ID:

1601811

HGNC Page

HGNC:26729

Description:

Predicted to enable mRNA binding activity. Predicted to be located in nucleus.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

FLJ35271; FLJ37078; serine/arginine repetitive matrix protein 3; SRRM2-like protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	76,201,896 - 76,287,287 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	76,201,896 - 76,287,288 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	75,831,214 - 75,916,604 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	75,752,311 - 75,754,554 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	70,699,693 - 70,785,104 (+)	NCBI		Celera
Cytogenetic Map	7	q11.23	NCBI
HuRef	7	70,917,643 - 71,002,839 (+)	NCBI		HuRef
CHM1_1	7	75,761,269 - 75,846,725 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	77,489,369 - 77,574,760 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	75,164,280 - 75,249,669 (+)	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SRRM3	Human	Chromosome 7q11.23 Deletion Syndrome, Distal, 1.2-MB		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: DISTAL CHROMOSOME 7q11.23 DELETION SYNDROME	ClinVar
SRRM3	Human	pleomorphic xanthoastrocytoma		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SRRM3	Human	1,2-dimethylhydrazine	increases expression	ISO	Srrm3 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in increased expression of SRRM3 mRNA	CTD	PMID:22206623
SRRM3	Human	17beta-estradiol	multiple interactions	EXP		6480464	[Estradiol co-treated with TGFB1 protein] results in increased expression of SRRM3 mRNA	CTD	PMID:30165855
SRRM3	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Srrm3 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of SRRM3 mRNA	CTD	PMID:33387578
SRRM3	Human	2-palmitoylglycerol	increases expression	EXP		6480464	2-palmitoylglycerol results in increased expression of SRRM3 mRNA	CTD	PMID:37199045
SRRM3	Human	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of SRRM3 mRNA and [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of SRRM3 mRNA	CTD	PMID:28628672
SRRM3	Human	4,4'-sulfonyldiphenol	decreases expression	ISO	Srrm3 (Mus musculus)	6480464	bisphenol S results in decreased expression of SRRM3 mRNA	CTD	PMID:30951980
SRRM3	Human	4,4'-sulfonyldiphenol	affects methylation	ISO	Srrm3 (Mus musculus)	6480464	bisphenol S affects the methylation of SRRM3 gene	CTD	PMID:31683443
SRRM3	Human	4,4'-sulfonyldiphenol	multiple interactions	ISO	Srrm3 (Rattus norvegicus)	6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of SRRM3 mRNA	CTD	PMID:36041667
SRRM3	Human	4,4'-sulfonyldiphenol	increases methylation	EXP		6480464	bisphenol S results in increased methylation of SRRM3 gene	CTD	PMID:31601247
SRRM3	Human	4,4'-sulfonyldiphenol	increases methylation	ISO	Srrm3 (Mus musculus)	6480464	bisphenol S results in increased methylation of SRRM3 exon	CTD	PMID:33297965
SRRM3	Human	aflatoxin B1	increases expression	ISO	Srrm3 (Mus musculus)	6480464	Aflatoxin B1 results in increased expression of SRRM3 mRNA	CTD	PMID:19770486
SRRM3	Human	aristolochic acid A	decreases expression	EXP		6480464	aristolochic acid I results in decreased expression of SRRM3 mRNA	CTD	PMID:33212167
SRRM3	Human	arsane	affects methylation	EXP		6480464	Arsenic affects the methylation of SRRM3 gene	CTD	PMID:25304211
SRRM3	Human	arsenic atom	affects methylation	EXP		6480464	Arsenic affects the methylation of SRRM3 gene	CTD	PMID:25304211
SRRM3	Human	atrazine	affects methylation	ISO	Srrm3 (Rattus norvegicus)	6480464	Atrazine affects the methylation of SRRM3 gene	CTD	PMID:35440735
SRRM3	Human	benzo[a]pyrene	multiple interactions	ISO	Srrm3 (Mus musculus)	6480464	Benzo(a)pyrene promotes the reaction [AHR protein binds to SRRM3 promoter]	CTD	PMID:19654925
SRRM3	Human	benzo[a]pyrene	increases expression	EXP		6480464	Benzo(a)pyrene results in increased expression of SRRM3 mRNA	CTD	PMID:32234424
SRRM3	Human	benzo[a]pyrene	affects methylation	EXP		6480464	Benzo(a)pyrene affects the methylation of SRRM3 5' UTR	CTD	PMID:27901495
SRRM3	Human	benzo[a]pyrene	increases methylation	EXP		6480464	Benzo(a)pyrene results in increased methylation of SRRM3 3' UTR and Benzo(a)pyrene results in increased methylation of SRRM3 promoter	CTD	PMID:27901495
SRRM3	Human	bis(2-ethylhexyl) phthalate	decreases expression	EXP		6480464	Diethylhexyl Phthalate results in decreased expression of SRRM3 mRNA	CTD	PMID:31163220
SRRM3	Human	bisphenol A	decreases expression	ISO	Srrm3 (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of SRRM3 mRNA	CTD	PMID:25181051
SRRM3	Human	bisphenol A	multiple interactions	ISO	Srrm3 (Rattus norvegicus)	6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of SRRM3 mRNA	CTD	PMID:36041667
SRRM3	Human	bisphenol A	decreases expression	ISO	Srrm3 (Mus musculus)	6480464	bisphenol A results in decreased expression of SRRM3 mRNA	CTD	PMID:32156529
SRRM3	Human	bisphenol A	decreases methylation	EXP		6480464	bisphenol A results in decreased methylation of SRRM3 gene	CTD	PMID:31601247
SRRM3	Human	bisphenol A	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of SRRM3 mRNA	CTD	PMID:28628672
SRRM3	Human	bisphenol F	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of SRRM3 mRNA	CTD	PMID:28628672
SRRM3	Human	bisphenol F	multiple interactions	ISO	Srrm3 (Rattus norvegicus)	6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of SRRM3 mRNA	CTD	PMID:36041667
SRRM3	Human	butanal	increases expression	EXP		6480464	butyraldehyde results in increased expression of SRRM3 mRNA	CTD	PMID:26079696
SRRM3	Human	C60 fullerene	decreases expression	ISO	Srrm3 (Rattus norvegicus)	6480464	fullerene C60 results in decreased expression of SRRM3 mRNA	CTD	PMID:19167457
SRRM3	Human	calcitriol	increases expression	EXP		6480464	Calcitriol results in increased expression of SRRM3 mRNA	CTD	PMID:21592394
SRRM3	Human	calcitriol	multiple interactions	EXP		6480464	[Testosterone co-treated with Calcitriol] results in increased expression of SRRM3 mRNA	CTD	PMID:21592394
SRRM3	Human	cisplatin	decreases expression	EXP		6480464	Cisplatin results in decreased expression of SRRM3 mRNA	CTD	PMID:27392435
SRRM3	Human	copper(II) sulfate	decreases expression	EXP		6480464	Copper Sulfate results in decreased expression of SRRM3 mRNA	CTD	PMID:19549813
SRRM3	Human	crocidolite asbestos	increases expression	ISO	Srrm3 (Mus musculus)	6480464	Asbestos and Crocidolite results in increased expression of SRRM3 mRNA	CTD	PMID:19446018
SRRM3	Human	dexamethasone	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of SRRM3 mRNA and [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of SRRM3 mRNA	CTD	PMID:28628672
SRRM3	Human	dioxygen	increases expression	ISO	Srrm3 (Mus musculus)	6480464	Oxygen deficiency results in increased expression of SRRM3 mRNA	CTD	PMID:24205000
SRRM3	Human	ethanol	affects splicing	ISO	Srrm3 (Mus musculus)	6480464	Ethanol affects the splicing of SRRM3 mRNA	CTD	PMID:30319688
SRRM3	Human	folic acid	increases expression	ISO	Srrm3 (Mus musculus)	6480464	Folic Acid results in increased expression of SRRM3 mRNA	CTD	PMID:25629700
SRRM3	Human	indometacin	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of SRRM3 mRNA and [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of SRRM3 mRNA	CTD	PMID:28628672
SRRM3	Human	methoxychlor	affects methylation	ISO	Srrm3 (Rattus norvegicus)	6480464	Methoxychlor affects the methylation of SRRM3 gene	CTD	PMID:35440735
SRRM3	Human	monosodium L-glutamate	increases expression	ISO	Srrm3 (Mus musculus)	6480464	Sodium Glutamate results in increased expression of SRRM3 mRNA	CTD	PMID:22078008
SRRM3	Human	pentanal	increases expression	EXP		6480464	pentanal results in increased expression of SRRM3 mRNA	CTD	PMID:26079696
SRRM3	Human	pirinixic acid	decreases expression	ISO	Srrm3 (Mus musculus)	6480464	pirinixic acid results in decreased expression of SRRM3 mRNA	CTD	PMID:23811191
SRRM3	Human	silicon dioxide	decreases expression	EXP		6480464	Silicon Dioxide analog results in decreased expression of SRRM3 mRNA	CTD	PMID:25895662
SRRM3	Human	sodium arsenite	decreases expression	ISO	Srrm3 (Mus musculus)	6480464	sodium arsenite results in decreased expression of SRRM3 mRNA	CTD	PMID:37682722
SRRM3	Human	testosterone	multiple interactions	EXP		6480464	[Testosterone co-treated with Calcitriol] results in increased expression of SRRM3 mRNA	CTD	PMID:21592394
SRRM3	Human	testosterone	increases expression	EXP		6480464	Testosterone results in increased expression of SRRM3 mRNA	CTD	PMID:21592394
SRRM3	Human	titanium dioxide	increases expression	ISO	Srrm3 (Mus musculus)	6480464	titanium dioxide results in increased expression of SRRM3 mRNA	CTD	PMID:35295148
SRRM3	Human	triclosan	increases expression	EXP		6480464	Triclosan results in increased expression of SRRM3 mRNA	CTD	PMID:30510588
SRRM3	Human	triptonide	increases expression	ISO	Srrm3 (Mus musculus)	6480464	triptonide results in increased expression of SRRM3 mRNA	CTD	PMID:33045310
SRRM3	Human	valproic acid	increases methylation	EXP		6480464	Valproic Acid results in increased methylation of SRRM3 gene	CTD	PMID:29154799
SRRM3	Human	valproic acid	affects expression	ISO	Srrm3 (Mus musculus)	6480464	Valproic Acid affects the expression of SRRM3 mRNA	CTD	PMID:17292431
SRRM3	Human	valproic acid	affects expression	EXP		6480464	Valproic Acid affects the expression of SRRM3 mRNA	CTD	PMID:25979313
SRRM3	Human	valproic acid	affects splicing	ISO	Srrm3 (Rattus norvegicus)	6480464	Valproic Acid affects the splicing of SRRM3 mRNA	CTD	PMID:29427782

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SRRM3	Human	nucleus	located_in	IEA	ARBA:ARBA00026330	150520179		UniProt	GO_REF:0000117

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SRRM3	Human	mRNA binding	enables	IBA	MGI:1916205 and PANTHER:PTN002857912	150520179		GO_Central	GO_REF:0000033

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SRRM3	Human	Pleomorphic xanthoastrocytoma		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8889548	PMID:12477932	PMID:12853948	PMID:14702039	PMID:15489334	PMID:21873635	PMID:26760575	PMID:29117863	PMID:32513696	PMID:33637726	PMID:34312180	PMID:35858306

SRRM3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	76,201,896 - 76,287,287 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	76,201,896 - 76,287,288 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	75,831,214 - 75,916,604 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	75,752,311 - 75,754,554 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	70,699,693 - 70,785,104 (+)	NCBI		Celera
Cytogenetic Map	7	q11.23	NCBI
HuRef	7	70,917,643 - 71,002,839 (+)	NCBI		HuRef
CHM1_1	7	75,761,269 - 75,846,725 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	77,489,369 - 77,574,760 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	75,164,280 - 75,249,669 (+)	NCBI

Srrm3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	135,835,693 - 135,903,627 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	135,835,744 - 135,903,626 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	135,806,860 - 135,874,773 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	135,806,890 - 135,874,772 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	136,293,976 - 136,350,642 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	136,091,517 - 136,126,595 (+)	NCBI		MGSCv36	mm8
Celera	5	132,825,431 - 132,882,977 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	75.42	NCBI

Srrm3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	26,445,718 - 26,515,185 (-)	NCBI		GRCr8
mRatBN7.2	12	20,808,878 - 20,878,557 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	20,809,089 - 20,878,505 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	21,950,502 - 22,020,439 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	22,562,898 - 22,632,853 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	21,629,399 - 21,699,325 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	23,855,400 - 23,925,793 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	23,855,400 - 23,925,741 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	25,853,016 - 25,923,187 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	21,927,594 - 22,005,675 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	12	22,572,450 - 22,641,548 (-)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

Srrm3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	14,855,077 - 14,914,315 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	14,855,387 - 14,914,315 (+)	NCBI	ChiLan1.0	ChiLan1.0

SRRM3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	93,666,193 - 93,751,179 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	141,930,831 - 142,015,817 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	67,732,909 - 67,818,031 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	82,653,155 - 82,736,257 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

SRRM3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	7,426,779 - 7,481,780 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	7,426,560 - 7,471,140 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	9,142,662 - 9,177,350 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	7,267,515 - 7,302,227 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	7,267,507 - 7,300,923 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	7,236,580 - 7,271,268 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	7,199,580 - 7,234,250 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	7,363,019 - 7,397,715 (+)	NCBI		UU_Cfam_GSD_1.0

Srrm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	131,862,759 - 131,915,515 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	2,121,141 - 2,173,837 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	2,121,052 - 2,169,982 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SRRM3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	10,046,538 - 10,102,124 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	10,046,538 - 10,102,149 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	9,998,451 - 10,030,087 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SRRM3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	10,336,615 - 10,424,545 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	10,364,092 - 10,422,922 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	5,994,074 - 6,076,806 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Srrm3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	14,873,396 - 14,929,008 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	14,873,340 - 14,929,023 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in SRRM3
53 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 7q11.22-21.11(chr7:71225344-81735657)x1	copy number loss	See cases [RCV000050709]	Chr7:71225344..81735657 [GRCh38] Chr7:70690330..81364973 [GRCh37] Chr7:70328266..81202909 [NCBI36] Chr7:7q11.22-21.11	pathogenic
GRCh38/hg38 7q11.23(chr7:75526437-76499472)x1	copy number loss	See cases [RCV000051302]	Chr7:75526437..76499472 [GRCh38] Chr7:75155767..76128789 [GRCh37] Chr7:74993703..75966725 [NCBI36] Chr7:7q11.23	uncertain significance
GRCh38/hg38 7q11.23(chr7:75567961-76584901)x1	copy number loss	See cases [RCV000051303]	Chr7:75567961..76584901 [GRCh38] Chr7:75197265..76214218 [GRCh37] Chr7:75035201..76052154 [NCBI36] Chr7:7q11.23	uncertain significance
GRCh38/hg38 7q11.21-21.11(chr7:64560824-79186156)x1	copy number loss	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052318]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052318]\|See cases [RCV000052318]	Chr7:64560824..79186156 [GRCh38] Chr7:64021202..78815472 [GRCh37] Chr7:63658637..78653408 [NCBI36] Chr7:7q11.21-21.11	pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1	copy number loss	See cases [RCV000052250]	Chr7:53985..159282531 [GRCh38] Chr7:53985..159075220 [GRCh37] Chr7:149068..158767981 [NCBI36] Chr7:7p22.3-q36.3	pathogenic
GRCh38/hg38 7q11.22-11.23(chr7:69382353-77823832)x1	copy number loss	See cases [RCV000054111]	Chr7:69382353..77823832 [GRCh38] Chr7:68847339..77453149 [GRCh37] Chr7:68485275..77291085 [NCBI36] Chr7:7q11.22-11.23	pathogenic
GRCh38/hg38 7q11.23-21.11(chr7:73873420-83988860)x1	copy number loss	See cases [RCV000054118]	Chr7:73873420..83988860 [GRCh38] Chr7:73992744..83618176 [GRCh37] Chr7:72925686..83456112 [NCBI36] Chr7:7q11.23-21.11	pathogenic
GRCh38/hg38 7q11.23-21.11(chr7:75496701-78375575)x1	copy number loss	See cases [RCV000054153]	Chr7:75496701..78375575 [GRCh38] Chr7:75126024..78004892 [GRCh37] Chr7:74963960..77842828 [NCBI36] Chr7:7q11.23-21.11	pathogenic
GRCh38/hg38 7q11.23(chr7:73352304-76722261)x1	copy number loss	See cases [RCV000133638]	Chr7:73352304..76722261 [GRCh38] Chr7:72766313..76351578 [GRCh37] Chr7:72404249..76189514 [NCBI36] Chr7:7q11.23	pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1	copy number loss	See cases [RCV000135401]	Chr7:54185..159282390 [GRCh38] Chr7:54185..159075079 [GRCh37] Chr7:149268..158767840 [NCBI36] Chr7:7p22.3-q36.3	pathogenic
GRCh38/hg38 7q11.23(chr7:75432651-76418304)x1	copy number loss	See cases [RCV000135520]	Chr7:75432651..76418304 [GRCh38] Chr7:75061927..76047621 [GRCh37] Chr7:74899863..75885557 [NCBI36] Chr7:7q11.23	likely pathogenic
GRCh38/hg38 7q11.23(chr7:75529854-76611483)x1	copy number loss	See cases [RCV000136113]	Chr7:75529854..76611483 [GRCh38] Chr7:75159180..76240800 [GRCh37] Chr7:74997116..76078736 [NCBI36] Chr7:7q11.23	pathogenic
GRCh38/hg38 7q11.23(chr7:75568161-76584760)x1	copy number loss	See cases [RCV000136550]	Chr7:75568161..76584760 [GRCh38] Chr7:75197465..76214077 [GRCh37] Chr7:75035401..76052013 [NCBI36] Chr7:7q11.23	uncertain significance
GRCh38/hg38 7q11.23(chr7:75529854-76626561)x3	copy number gain	See cases [RCV000135929]	Chr7:75529854..76626561 [GRCh38] Chr7:75159180..76255878 [GRCh37] Chr7:74997116..76093814 [NCBI36] Chr7:7q11.23	uncertain significance
GRCh38/hg38 7q11.23-21.11(chr7:74377395-82031742)x1	copy number loss	See cases [RCV000142381]	Chr7:74377395..82031742 [GRCh38] Chr7:73992744..81661058 [GRCh37] Chr7:73429661..81498994 [NCBI36] Chr7:7q11.23-21.11	pathogenic
GRCh38/hg38 7q11.22-21.11(chr7:72179092-79164071)	copy number gain	See cases [RCV000143454]	Chr7:72179092..79164071 [GRCh38] Chr7:71644077..78793387 [GRCh37] Chr7:71282013..78631323 [NCBI36] Chr7:7q11.22-21.11	likely pathogenic
GRCh37/hg19 7q11.23(chr7:73591993-75914797)x1	copy number loss	See cases [RCV000240532]	Chr7:73591993..75914797 [GRCh37] Chr7:7q11.23	likely pathogenic
TMEM106B-BRAF fusion	deletion	Pleomorphic xanthoastrocytoma [RCV000454357]	Chr7:12258147..140494267 [GRCh37] Chr7:7p21.3-q34	pathogenic
GRCh37/hg19 7q11.23(chr7:75058408-77082896)x1	copy number loss	See cases [RCV000449141]	Chr7:75058408..77082896 [GRCh37] Chr7:7q11.23	pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1	copy number loss	See cases [RCV000446044]	Chr7:43360..159119707 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)	copy number gain	See cases [RCV000510686]	Chr7:43361..159119707 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3	copy number gain	See cases [RCV000511549]	Chr7:43361..159119707 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
GRCh37/hg19 7q11.23(chr7:72456604-76007380)x1	copy number loss	See cases [RCV000510782]	Chr7:72456604..76007380 [GRCh37] Chr7:7q11.23	pathogenic
NM_001110199.3(SRRM3):c.1135G>C (p.Ala379Pro)	single nucleotide variant	not specified [RCV004309495]	Chr7:76281567 [GRCh38] Chr7:75910885 [GRCh37] Chr7:7q11.23	uncertain significance
Single allele	deletion	not provided [RCV000677988]	Chr7:73591993..93683437 [GRCh37] Chr7:7q11.23-21.3	uncertain significance
GRCh37/hg19 7q11.23(chr7:75384846-76279036)x3	copy number gain	not provided [RCV000682872]	Chr7:75384846..76279036 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:75085013-75995207)x3	copy number gain	not provided [RCV000682874]	Chr7:75085013..75995207 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:75082354-76007380)x1	copy number loss	not provided [RCV000682875]	Chr7:75082354..76007380 [GRCh37] Chr7:7q11.23	likely pathogenic
NC_000007.13:g.(20954043_21001537)_(114528369_114556605)inv	inversion	Childhood apraxia of speech [RCV000234948]	Chr7:21001537..114528369 [GRCh37] Chr7:7p15.3-q31.1	pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3	copy number gain	not provided [RCV000746278]	Chr7:10704..159122532 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3	copy number gain	not provided [RCV000746280]	Chr7:44935..159126310 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
GRCh37/hg19 7q11.23(chr7:72744494-76038818)	copy number loss	Williams syndrome [RCV000767638]	Chr7:72744494..76038818 [GRCh37] Chr7:7q11.23	pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3	copy number gain	not provided [RCV000848126]	Chr7:10365..159119707 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
NC_000007.13:g.(?_75914933)_(76029908_?)del	deletion	not provided [RCV001031816]	Chr7:75914933..76029908 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:75748898-75981782)x3	copy number gain	not provided [RCV000849043]	Chr7:75748898..75981782 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:75076890-76007283)x3	copy number gain	not provided [RCV000849303]	Chr7:75076890..76007283 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:72621722-76007380)x1	copy number loss	not provided [RCV001005967]	Chr7:72621722..76007380 [GRCh37] Chr7:7q11.23	pathogenic
GRCh37/hg19 7q11.23(chr7:75091878-76117614)x1	copy number loss	not provided [RCV000848509]	Chr7:75091878..76117614 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:75146858-75995207)x3	copy number gain	not provided [RCV002473454]	Chr7:75146858..75995207 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1151G>C (p.Gly384Ala)	single nucleotide variant	not specified [RCV004312624]	Chr7:76281583 [GRCh38] Chr7:75910901 [GRCh37] Chr7:7q11.23	uncertain significance
Single allele	complex	Ring chromosome 7 [RCV002280646]	Chr7:43360..159119707 [GRCh37] Chr7:7p22.3-q36.3	pathogenic
GRCh37/hg19 7q11.23(chr7:72403117-76709600)x1	copy number loss	not provided [RCV001258798]	Chr7:72403117..76709600 [GRCh37] Chr7:7q11.23	pathogenic
NC_000007.14:g.(75058300_?)_(?_79083658)del	deletion	Distal 7q11.23 microdeletion syndrome [RCV001839073]	Chr7:75058300..79083658 [GRCh38] Chr7:7q11.23-21.11	pathogenic
NC_000007.13:g.(?_75583311)_(75988125_?)del	deletion	not provided [RCV001942954]	Chr7:75583311..75988125 [GRCh37] Chr7:7q11.23	uncertain significance
NC_000007.13:g.(?_75583311)_(75988125_?)dup	duplication	not provided [RCV003116619]	Chr7:75583311..75988125 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.977G>C (p.Gly326Ala)	single nucleotide variant	not specified [RCV004303911]	Chr7:76267404 [GRCh38] Chr7:75896722 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7p22.3-q36.3(chr7:56604613-96692931)x1	copy number loss	See cases [RCV002287832]	Chr7:56604613..96692931 [GRCh37] Chr7:7p22.3-q36.3	uncertain significance
GRCh37/hg19 7q11.23(chr7:75085014-76007380)x1	copy number loss	not provided [RCV002472641]	Chr7:75085014..76007380 [GRCh37] Chr7:7q11.23	likely pathogenic
GRCh37/hg19 7q11.23(chr7:75091880-75951903)x3	copy number gain	not provided [RCV002472796]	Chr7:75091880..75951903 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1565G>C (p.Arg522Pro)	single nucleotide variant	not specified [RCV004219254]	Chr7:76282842 [GRCh38] Chr7:75912160 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.122C>G (p.Ala41Gly)	single nucleotide variant	not specified [RCV004222595]	Chr7:76235188 [GRCh38] Chr7:75864506 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1472G>T (p.Ser491Ile)	single nucleotide variant	not specified [RCV004116176]	Chr7:76282749 [GRCh38] Chr7:75912067 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1297G>A (p.Gly433Ser)	single nucleotide variant	not specified [RCV004076010]	Chr7:76281729 [GRCh38] Chr7:75911047 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1163G>A (p.Arg388Gln)	single nucleotide variant	not specified [RCV004225351]	Chr7:76281595 [GRCh38] Chr7:75910913 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.370G>A (p.Glu124Lys)	single nucleotide variant	not specified [RCV004143791]	Chr7:76259940 [GRCh38] Chr7:75889258 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.410G>T (p.Gly137Val)	single nucleotide variant	not specified [RCV004216556]	Chr7:76259980 [GRCh38] Chr7:75889298 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.116T>C (p.Leu39Pro)	single nucleotide variant	not specified [RCV004129512]	Chr7:76235182 [GRCh38] Chr7:75864500 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.973G>T (p.Gly325Trp)	single nucleotide variant	not specified [RCV004240058]	Chr7:76267400 [GRCh38] Chr7:75896718 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1432G>A (p.Gly478Ser)	single nucleotide variant	not specified [RCV004232420]	Chr7:76282709 [GRCh38] Chr7:75912027 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.943G>C (p.Gly315Arg)	single nucleotide variant	not specified [RCV004238659]	Chr7:76267370 [GRCh38] Chr7:75896688 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1217G>A (p.Arg406Lys)	single nucleotide variant	not specified [RCV004189180]	Chr7:76281649 [GRCh38] Chr7:75910967 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.626A>T (p.His209Leu)	single nucleotide variant	not specified [RCV004156848]	Chr7:76261402 [GRCh38] Chr7:75890720 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.101G>T (p.Arg34Leu)	single nucleotide variant	not specified [RCV004319945]	Chr7:76235167 [GRCh38] Chr7:75864485 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1064C>A (p.Thr355Lys)	single nucleotide variant	not specified [RCV004263964]	Chr7:76281496 [GRCh38] Chr7:75910814 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1734C>T (p.Ser578=)	single nucleotide variant	not provided [RCV004707827]\|not specified [RCV004341756]	Chr7:76285615 [GRCh38] Chr7:75914933 [GRCh37] Chr7:7q11.23	likely benign
NM_001110199.3(SRRM3):c.668G>A (p.Arg223Gln)	single nucleotide variant	not specified [RCV004347240]	Chr7:76261575 [GRCh38] Chr7:75890893 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.995A>C (p.His332Pro)	single nucleotide variant	not specified [RCV004336323]	Chr7:76267422 [GRCh38] Chr7:75896740 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.239C>T (p.Ser80Leu)	single nucleotide variant	not specified [RCV004349187]	Chr7:76248193 [GRCh38] Chr7:75877511 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.848G>A (p.Arg283Gln)	single nucleotide variant	not provided [RCV003433906]	Chr7:76267275 [GRCh38] Chr7:75896593 [GRCh37] Chr7:7q11.23	likely benign
NM_001110199.3(SRRM3):c.1002G>T (p.Pro334=)	single nucleotide variant	not provided [RCV003433907]	Chr7:76267429 [GRCh38] Chr7:75896747 [GRCh37] Chr7:7q11.23	likely benign
GRCh37/hg19 7q11.23(chr7:72732819-76003862)x3	copy number gain	not specified [RCV003986700]	Chr7:72732819..76003862 [GRCh37] Chr7:7q11.23	pathogenic
NM_001110199.3(SRRM3):c.1478G>A (p.Gly493Asp)	single nucleotide variant	not specified [RCV004460629]	Chr7:76282755 [GRCh38] Chr7:75912073 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1485C>A (p.His495Gln)	single nucleotide variant	not specified [RCV004460630]	Chr7:76282762 [GRCh38] Chr7:75912080 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.176G>A (p.Arg59His)	single nucleotide variant	not specified [RCV004460632]	Chr7:76235242 [GRCh38] Chr7:75864560 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.527G>A (p.Gly176Asp)	single nucleotide variant	not specified [RCV004460634]	Chr7:76260179 [GRCh38] Chr7:75889497 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.611A>C (p.Lys204Thr)	single nucleotide variant	not specified [RCV004460635]	Chr7:76261387 [GRCh38] Chr7:75890705 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.860G>T (p.Arg287Leu)	single nucleotide variant	not specified [RCV004460637]	Chr7:76267287 [GRCh38] Chr7:75896605 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.959G>A (p.Arg320Gln)	single nucleotide variant	not specified [RCV004460638]	Chr7:76267386 [GRCh38] Chr7:75896704 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1145G>T (p.Gly382Val)	single nucleotide variant	not specified [RCV004460627]	Chr7:76281577 [GRCh38] Chr7:75910895 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1485C>G (p.His495Gln)	single nucleotide variant	not specified [RCV004460631]	Chr7:76282762 [GRCh38] Chr7:75912080 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.970C>T (p.His324Tyr)	single nucleotide variant	not specified [RCV004460639]	Chr7:76267397 [GRCh38] Chr7:75896715 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.971A>T (p.His324Leu)	single nucleotide variant	not specified [RCV004460640]	Chr7:76267398 [GRCh38] Chr7:75896716 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1427C>T (p.Ala476Val)	single nucleotide variant	not specified [RCV004460628]	Chr7:76282704 [GRCh38] Chr7:75912022 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.409G>C (p.Gly137Arg)	single nucleotide variant	not specified [RCV004460633]	Chr7:76259979 [GRCh38] Chr7:75889297 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.66C>G (p.Phe22Leu)	single nucleotide variant	not specified [RCV004460636]	Chr7:76235132 [GRCh38] Chr7:75864450 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1252G>T (p.Gly418Cys)	single nucleotide variant	not specified [RCV004675420]	Chr7:76281684 [GRCh38] Chr7:75911002 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.146G>A (p.Arg49His)	single nucleotide variant	not specified [RCV004675421]	Chr7:76235212 [GRCh38] Chr7:75864530 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.499C>T (p.Pro167Ser)	single nucleotide variant	not specified [RCV004675422]	Chr7:76260151 [GRCh38] Chr7:75889469 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1229G>A (p.Arg410His)	single nucleotide variant	not specified [RCV004857483]	Chr7:76281661 [GRCh38] Chr7:75910979 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1364G>C (p.Gly455Ala)	single nucleotide variant	not specified [RCV004857484]	Chr7:76281796 [GRCh38] Chr7:75911114 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23-21.3(chr7:74666254-97791584)x1	copy number loss	not provided [RCV004819352]	Chr7:74666254..97791584 [GRCh37] Chr7:7q11.23-21.3	pathogenic
NM_001110199.3(SRRM3):c.128A>G (p.Glu43Gly)	single nucleotide variant	not specified [RCV004873520]	Chr7:76235194 [GRCh38] Chr7:75864512 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23-21.11(chr7:75588704-80277632)x1	copy number loss	not provided [RCV000746819]	Chr7:75588704..80277632 [GRCh37] Chr7:7q11.23-21.11	pathogenic
GRCh37/hg19 7q11.23(chr7:75233243-76007283)x3	copy number gain	not provided [RCV000849638]	Chr7:75233243..76007283 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1262G>C (p.Arg421Pro)	single nucleotide variant	not specified [RCV004208611]	Chr7:76281694 [GRCh38] Chr7:75911012 [GRCh37] Chr7:7q11.23	uncertain significance
GRCh37/hg19 7q11.23(chr7:75835229-75951903)x3	copy number gain	not provided [RCV003484686]	Chr7:75835229..75951903 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.340G>A (p.Ala114Thr)	single nucleotide variant	not specified [RCV004873521]	Chr7:76259910 [GRCh38] Chr7:75889228 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.1220G>T (p.Gly407Val)	single nucleotide variant	not specified [RCV004873522]	Chr7:76281652 [GRCh38] Chr7:75910970 [GRCh37] Chr7:7q11.23	uncertain significance
NM_001110199.3(SRRM3):c.275G>A (p.Arg92Gln)	single nucleotide variant	not specified [RCV004873518]	Chr7:76248229 [GRCh38] Chr7:75877547 [GRCh37] Chr7:7q11.23	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	4151
Count of miRNA genes:	866
Interacting mature miRNAs:	1079
Transcripts:	ENST00000326382, ENST00000388802, ENST00000413003, ENST00000464752, ENST00000479284, ENST00000479294
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597277050	GWAS1373124_H	educational attainment QTL GWAS1373124 (human)		6e-19	educational attainment		7	76270905	76270906	Human
406978357	GWAS627333_H	blood protein measurement QTL GWAS627333 (human)		2e-14	blood protein amount (VT:0005416)	blood protein measurement (CMO:0000028)	7	76250016	76250017	Human
597296511	GWAS1392585_H	NADPH--cytochrome P450 reductase measurement QTL GWAS1392585 (human)		0.000002	NADPH--cytochrome P450 reductase measurement		7	76226193	76226194	Human
597344924	GWAS1440998_H	glucose measurement QTL GWAS1440998 (human)		5e-10	glucose measurement	blood glucose level (CMO:0000046)	7	76226201	76226202	Human
597369292	GWAS1465366_H	apolipoprotein B measurement QTL GWAS1465366 (human)		2e-08	apolipoprotein B measurement	blood apoliprotein B level (CMO:0000522)	7	76269767	76269768	Human
597280848	GWAS1376922_H	hemoglobin A1 measurement QTL GWAS1376922 (human)		3e-08	hemoglobin A1 measurement		7	76226193	76226194	Human
597329360	GWAS1425434_H	Headache, glucose measurement QTL GWAS1425434 (human)		5e-08	Headache, glucose measurement	blood glucose level (CMO:0000046)	7	76226201	76226202	Human
597326993	GWAS1423067_H	glucose measurement QTL GWAS1423067 (human)		1e-09	glucose measurement	blood glucose level (CMO:0000046)	7	76226201	76226202	Human
597115660	GWAS1211734_H	self reported educational attainment QTL GWAS1211734 (human)		1e-10	self reported educational attainment		7	76272712	76272713	Human
597041789	GWAS1137863_H	heat shock protein beta-1 measurement QTL GWAS1137863 (human)		2e-25	heat shock protein beta-1 measurement		7	76284324	76284325	Human
597021016	GWAS1117090_H	eotaxin measurement QTL GWAS1117090 (human)		0.000002	eotaxin measurement		7	76216279	76216280	Human
597226869	GWAS1322943_H	self reported educational attainment QTL GWAS1322943 (human)		1e-09	self reported educational attainment		7	76216765	76216766	Human

G42608

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	75,835,395 - 75,835,555	UniSTS	GRCh37
GRCh37	17	56,537,448 - 56,537,651	UniSTS	GRCh37
Build 36	7	75,673,331 - 75,673,491	RGD	NCBI36
Celera	17	52,999,248 - 52,999,451	UniSTS
Celera	7	70,703,873 - 70,704,033	RGD
Cytogenetic Map	17	q22	UniSTS
Cytogenetic Map	7	q11.23	UniSTS
HuRef	17	51,897,964 - 51,898,167	UniSTS
HuRef	7	70,921,823 - 70,921,983	UniSTS
CRA_TCAGchr7v2	7	75,168,459 - 75,168,619	UniSTS

RH103130

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	75,916,313 - 75,916,547	UniSTS	GRCh37
Build 36	7	75,754,249 - 75,754,483	RGD	NCBI36
Celera	7	70,784,812 - 70,785,046	RGD
Cytogenetic Map	7	q11.23	UniSTS
HuRef	7	71,002,547 - 71,002,781	UniSTS
CRA_TCAGchr7v2	7	75,249,377 - 75,249,611	UniSTS
GeneMap99-GB4 RH Map	7	430.61	UniSTS

D7S1515

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	75,883,960 - 75,884,167	UniSTS	GRCh37
GRCh37	7	75,884,106 - 75,884,516	UniSTS	GRCh37
Build 36	7	75,722,042 - 75,722,452	RGD	NCBI36
Celera	7	70,752,435 - 70,752,642	UniSTS
Celera	7	70,752,581 - 70,752,992	RGD
Cytogenetic Map	7	q11.23	UniSTS
HuRef	7	70,970,593 - 70,971,004	UniSTS
HuRef	7	70,970,447 - 70,970,654	UniSTS
CRA_TCAGchr7v2	7	75,217,024 - 75,217,231	UniSTS
CRA_TCAGchr7v2	7	75,217,170 - 75,217,580	UniSTS

GDB:1318669

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	75,842,710 - 75,842,895	UniSTS	GRCh37
Build 36	7	75,680,646 - 75,680,831	RGD	NCBI36
Celera	7	70,711,187 - 70,711,372	RGD
Cytogenetic Map	7	q11.23	UniSTS
HuRef	7	70,929,137 - 70,929,322	UniSTS
CRA_TCAGchr7v2	7	75,175,774 - 75,175,959	UniSTS

GDB:4585178

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	75,901,219 - 75,901,311	UniSTS	GRCh37
Build 36	7	75,739,155 - 75,739,247	RGD	NCBI36
Celera	7	70,769,700 - 70,769,792	RGD
Cytogenetic Map	7	q11.23	UniSTS
HuRef	7	70,987,359 - 70,987,451	UniSTS
CRA_TCAGchr7v2	7	75,234,283 - 75,234,375	UniSTS

SHGC-30726

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	75,902,561 - 75,902,685	UniSTS	GRCh37
Build 36	7	75,740,497 - 75,740,621	RGD	NCBI36
Celera	7	70,771,043 - 70,771,167	RGD
Cytogenetic Map	7	q11.23	UniSTS
HuRef	7	70,988,702 - 70,988,826	UniSTS
CRA_TCAGchr7v2	7	75,235,625 - 75,235,749	UniSTS
GeneMap99-GB4 RH Map	7	429.57	UniSTS
Whitehead-RH Map	7	404.4	UniSTS

D7S1515

Human Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	7	q11.23	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2410	2788	2224	4944	1657	2275	4	562	1493	404	2268	6773	6019	47	3709	847	1727	1601	171	1


RefSeq Transcripts	NM_001110199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001291831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC005077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI815474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK092590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK094397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC029292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC045627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC063788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC071856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC096755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE466083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA502814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA949697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF573703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000464752 ⟹ ENSP00000483698

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	76,265,407 - 76,269,992 (+)	Ensembl

Ensembl Acc Id:

ENST00000479284

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	76,273,053 - 76,281,486 (+)	Ensembl

Ensembl Acc Id:

ENST00000479294

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	76,234,982 - 76,260,034 (+)	Ensembl

Ensembl Acc Id:

ENST00000611745 ⟹ ENSP00000480851

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	76,201,896 - 76,287,287 (+)	Ensembl

Ensembl Acc Id:

ENST00000612155

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	76,282,614 - 76,287,288 (+)	Ensembl

RefSeq Acc Id:

NM_001110199 ⟹ NP_001103669

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	76,201,896 - 76,287,287 (+)	NCBI
GRCh37	7	75,831,211 - 75,916,609 (+)	NCBI
Celera	7	70,699,693 - 70,785,104 (+)	RGD
HuRef	7	70,917,643 - 71,002,839 (+)	RGD
CHM1_1	7	75,761,264 - 75,846,729 (+)	NCBI
T2T-CHM13v2.0	7	77,489,369 - 77,574,760 (+)	NCBI
CRA_TCAGchr7v2	7	75,164,280 - 75,249,669 (+)	ENTREZGENE

Sequence:

show sequence

GTCCAGCATTTCAGCAAGCGGCGGCAGCACCCGCGGGGAGGCAGAGGGTGCGGGGCCGTGGGGGCCGCGGAGCTGCCCTGCCCAACTCAGCCCAGACTAGGCGGCAGCCCGGACCGGCGGGACCCGAG
GGCCTGGCCCCAGCGCCCGGTAGATCGCGGCGGTCAGCGGTGAGGGCCAGCGGCCCAGGCCAGCGGCTCCAGGGCCAGCCACGATGTCCTCCACCGTGAACAACGGGGCGGCCAGCATGCAGTCCACA
CCCGACGCCGCGAACGGCTTCCCGCAGCCCAGCTCCTCCTCGGGGACCTGGCCGCGGGCGGAAGAGGAGCTGCGCGCCGCGGAGCCGGGCCTGGTGAAGCGCGCGCACCGCGAGATCCTGGACCACGA
GCGCAAGCGGCGGGTGGAGCTCAAGTGCATGGAGCTGCAGGAGATGATGGAGGAGCAGGGGTATTCGGAGGAGGAGATTCGGCAGAAAGTGGGGACATTCCGGCAGATGCTGATGGAGAAGGAGGGAG
TGCTCACCAGGGAGGACCGGCCTGGGGGCCACATTGTGGCGGAGACCCCGCGGCTGACCGAGGGCGCTGAGCCGGGCCTGGAGTACGCGCCCTTTGACGATGACGACGGCCCAGTGGACTGTGACTGC
CCGGCCTCCTGCTACCGCGGCCACCGCGGGTACAGGACCAAGCATTGGTCTAGCAGCTCGGCATCGCCCCCTCCCAAGAAAAAGAAGAAAAAGAAAGGCGGCCACCGGAGAAGCCGCAAAAAGAGGAG
ACTGGAGTCCGAATGCAGCTGTGGGAGCTCCTCACCCCTCCGCAAGAAGAAGAAGAGTGTGAAGAAGCATCGCCGAGACAGGTCTGATTCTGGGTCCCGGAGGAAGAGACGGCACAGATCTCGAAGCT
CCAAGTGCAAAAGAAAAGAGAAGAACAAAGAGAAGAAGAGGCCTCACACAGAGTCCCCAGGCCGGAGGTCTCATCGCCATAGCAGTGGCAGCTCCCACAGCCCCTCCCTCTCCTCCCACTACAGTGAT
TCCAGATCTCCCAGCAGGCTGAGCCCCAAGCACCGAGACGAAGGGCGAAAGACGGGCAGCCAGCGGTCCAGCGGAAGCCGGTCGCCTTCCCCGTCGGGCGGCAGCGGATGGGGGTCGCCCCAGCGGAA
CGGCGGCAGCGGGCAGCGGAGCGGAGCGCACGGGGGCCGCCCCGGCTCGGCGCACAGCCCGCCCGATAAGCCCAGCTCGCCCTCGCCCAGGGTCCGTGACAAGGCGGCGGCCGCCGCACCCACGCCGC
CCGCGCGGGGGAAGGAGAGCCCGAGCCCGCGCTCGGCGCCGTCGTCCCAAGGTCGCGGAGGCCGCGCGGCGGGCGGGGCGGGCAGGCGGCGGCGGCGGCGGCGTAGGCGGCGGCGCTCGCGGTCCTCG
GCGTCCGCGCCCCGCCGCAGGGGTCGCCGGCGCCCCCGGCCCGCGCCCCCCCGGGGCTCGTCGCGCTCGCTCAGCAGGGCCCGCTCCAGCAGCGACTCCGGCAGCGGCCGCGGCGCCCCCGGCCCCGG
GCCCGAGCCCGGCTCTGAGCGAGGCCACGGCGGACACGGGAAACGGGCCAAGGAGCGGCCCCCGCGCGCGCGGCCCGCCAGCACCTCTCCGTCCCCGGGCGCGCACGGCCGGCGCGGCGGCCCAGAAG
GGAAGAGCTCGTCGCGCAGCCCCGGCCCGCACCCCCGCTCCTGGAGCTCCAGCCGCTCGCCCTCCAAATCTCGCTCGCGCTCTGCGGAGAAGCGGCCCCACAGCCCCAGCCGCTCGCCGTCGCCCAAG
AAGCCCCTCAGCCGGGACAAGGACGGCGAGGGCCGCGCAAGGCACTCTGAGGCCGAGGCCACCCGCGCCCGGCGCCGCTCCCGCAGCTACTCGCCCATCCGCAAGCGGCGCCGGGACTCGCCAAGCTT
CATGGAGCCGCGGCGCATCACCAGCGCCCGCAAGCGTCCTATTCCATACTACCGGCCCAGCCCCTCTTCCTCCTCCAGCTGCTTGAGCAGCGACTACTCGACCCGGAGCCACAGCCGCAGCCCCAGCC
CCGGCCACAGCCACGGGAGCTACAGCAGTCGCAGCCATGGGACCCGCAGCCGGACACGCAGCCCCTCGAGGACCCCCAGTCCCAGCTACCACAGCCGGAGCAGCTCTGAGAGCGGGGGCTTCTGAGCC
CAGACAGACTCAGCTTGGTGCCCCCCTGGCACTGGGAGAGGCGAGGGGCGGGCCCCAGGACCCCAGTGGGGAGGGGGCTATATCTCCTTGCCCCCAAGGCTACAAAGAGGTCTCAGGGCCAGTGCACG
GGCAGATGGGACCGGGGAAGACTTTGAGGGTGGGCATCCAGTGGACAAGGAGAAGCCAGATGTGCTGCTTCTACGGGTGTCCTCTCCCACCTCCTGTCCACCCACTGTGCCCGGGGAACAAAGAGCCG
TTACGAACACAGGAATCTCCCCATCCCCCTTCCTGCTGATGCCAACTCACCAGGCTTGGGACTGCTGCCGGTGGATGGTACCAGAGTCCATGATCTGCTCTGTCACTTCACCTTAGCTCAGTGCAGCC
AGGGACACCTTGCAAGGTGCCAGCCCTGGGAGCCCCTCTTCCGCACTACACAGCTCCCTCCACTCCTCTCTTATCACTGGGCAGACGAGGAGGTGGTACAGCACATGGGTTTGGAGCTAGACAGAAGG
AAGAACAGCCTAACCCTTGGTGCACCCCCATCCAAGCTGGGGAGCTGCATCCTTTTGAGCTGGCTGCAGGAGGACCCTGGCTGAGGGCTGGTGGCTGGCCCCACAGCCTCCCCCAAGCTCCTCCACTG
ACCCAGGAGTGCCCAGACGGGTGGCCCCCAAAATCCCAGCCTGGGGAGCTAGGCACCTCACTCTTGGTCTGACCTCTCCAGGCCAGGCTCTCCTCACCCCATGCCCTGGGCCAAGGTCCTACCAGCCA
TGACTACTGCATGACAAGAGGTGGGGGGTACAGACCTCAGGTACATTTGACCCTGAGGTTAAAAGGGGTTCAGGTCAAGAGGTGGGAGAGGAAAGGGGTAGATGGGAGGTGGAATCTGTAGGAAAGAG
AAAAAGCAAAGTCGTTCACTGACTGAGTAGCCCCCAGGGAGTGGAGACGGGTCCCTGGGGAGGGAGCAGCTGACAGGTCAGCAGTGCCCCCAGCCCCACCCAAGAGGAGGGCAGCGTGTGCCTGTGGT
CTGGGACGTGGGCTGGATGGCAGCCCAGGGTCACAGGCATAGGATAACATGTGCTTTGGACCTGACAAGGGAGTACCTTGGGGGTCTGATGGGGTCATGGCCAGCCGAGCCTCTGTAGAGATGGAGGC
TACAGCCCTCAGAAGGGAGGGGAGGAAAGAGACTGAGGGCCCTGGCCTGGGGCGTCGATGGGGAAGCGGTGGCCCCCAGTCCTCTTCTGCTGCTCCCAGCCCCCTCCTCCTGGGGCCCTCAGGGATCT
CATGAAGTCTTCCTTGGCCCAACCAGGCAGATGCCCCGGGCTCCAGTGGGGGGAGGGGTCTGGGGTCTGGTCCGGGTTCCCCGCTTTCTCTATGTCCCCCCTCCCTCTTTCTCCGCAGTGCGGATAAA
AATTGGACTCGAATAAAACCCTTGGTGCCCGGA

hide sequence

RefSeq Acc Id:

NM_001291831 ⟹ NP_001278760

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	76,201,896 - 76,287,287 (+)	NCBI
CHM1_1	7	75,761,264 - 75,846,729 (+)	NCBI
T2T-CHM13v2.0	7	77,489,369 - 77,574,760 (+)	NCBI

Sequence:

show sequence

GTCCAGCATTTCAGCAAGCGGCGGCAGCACCCGCGGGGAGGCAGAGGGTGCGGGGCCGTGGGGG
CCGCGGAGCTGCCCTGCCCAACTCAGCCCAGACTAGGCGGCAGCCCGGACCGGCGGGACCCGAGGGCCTGGCCCCAGCGCCCGGTAGATCGCGGCGGTCAGCGGTGAGGGCCAGCGGCCCAGGCCAGC
GGCTCCAGGGCCAGCCACGATGTCCTCCACCGTGAACAACGGGGCGGCCAGCATGCAGTCCACACCCGACGCCGCGAACGGCTTCCCGCAGCCCAGCTCCTCCTCGGGGACCTGGCCGCGGGCGGAAG
AGGAGCTGCGCGCCGCGGAGCCGGGCCTGGTGAAGCGCGCGCACCGCGAGATCCTGGACCACGAGCGCAAGCGGCGGGTGGAGCTCAAGTGCATGGAGCTGCAGGAGATGATGGAGGAGCAGGGGTAT
TCGGAGGAGGAGATTCGGCAGAAAGTGGGGACATTCCGGCAGATGCTGATGGAGAAGGAGGGAGTGCTCACCAGGGAGGACCGGCCTGGGGGCCACATTGTGGCGGAGACCCCGCGGCTGACCGAGGG
CGCTGAGCCGGGCCTGGAGTACGCGCCCTTTGACGATGACGACGGCCCAGTGGACTGTGACTGCCCGGCCTCCTGCTACCGCGGCCACCGCGGGTACAGGACCAAGCATTGGTCTAGCAGCTCGGCAT
CGCCCCCTCCCAAGAAAAAGAAGAAAAAGAAAGGCGGCCACCGGAGAAGCCGCAAAAAGAGGAGACTGGAGTCCGAATGCAGCTGTGGGAGCTCCTCACCCCTCCGCAAGAAGAAGAAGAGTGTGAAG
AAGCATCGCCGAGACAGGTCTGATTCTGGGTCCCGGAGGAAGAGACGGCACAGATCTCGAAGCTCCAAGTGCAAAAGAAAAGAGAAGAACAAAGAGAAGAAGAGGCCTCACACAGAGTCCCCAGGCCG
GAGGTCTCATCGCCATAGCAGTGGCAGCTCCCACAGCCCCTCCCTCTCCTCCCACTACAGTGATTCCAGATCTCCCAGCAGGCTGAGCCCCAAGCACCGAGACGAAGGGCGAAAGACGGGCAGCCAGC
GGTCCAGCGGAAGCCGGTCGCCTTCCCCGTCGGGCGGCAGCGGATGGGGGTCGCCCCAGCGGAACGGCGGCAGCGGGCAGCGGAGCGGAGCGCACGGGGGCCGCCCCGGCTCGGCGCACAGCCCGCCC
GATAAGCCCAGCTCGCCCTCGCCCAGGGTCCGTGACAAGGCGGCGGCCGCCGCACCCACGCCGCCCGCGCGGGGGAAGGAGAGCCCGAGCCCGCGCTCGGCGCCGTCGTCCCAAGGTCGCGGAGGCCG
CGCGGCGGGCGGGGCGGGCAGGCGGCGGCGGCGGCGGCGTAGGCGGCGGCGCTCGCGGTCCTCGGCGTCCGCGCCCCGCCGCAGGGGTCGCCGGCGCCCCCGGCCCGCGCCCCCCCGGGGCTCGTCGC
GCTCGCTCAGCAGGGCCCGCTCCAGCAGCGACTCCGGCAGCGGCCGCGGCGCCCCCGGCCCCGGGCCCGAGCCCGGCTCTGAGCGAGGCCACGGCGGACACGGGAAACGGGCCAAGGAGCGGCCCCCG
CGCGCGCGGCCCGCCAGCACCTCTCCGTCCCCGGGCGCGCACGGCCGGCGCGGCGGCCCAGAAGGGAAGAGCTCGTCGCGCAGCCCCGGCCCGCACCCCCGCTCCTGGAGCTCCAGCCGCTCGCCCTC
CAAATCTCGCTCGCGCTCTGCGGAGAAGCGGCCCCACAGCCCCAGCCGCTCGCCGTCGCCCAAGAAGCCCCTCAGCCGGGACAAGGACGGCGAGGGCCGCGCAAGGCACTCTGAGGCCGAGGCCACCC
GCGCCCGGCGCCGCTCCCGCAGCTACTCGCCCATCCGCAAGCGGCGCCGGGACTCGCCAAGCTTCATGGAGCCGCGGCGCATCACCAGGTCCAGCCTGCTGAGTGGCCTGTGGTCAGCCTGGGGGCCA
GGCGGACCCCTCTGCACAGGCTGCCTGGGAGATGCCCAACGCCCGCAAGCGTCCTATTCCATACTACCGGCCCAGCCCCTCTTCCTCCTCCAGCTGCTTGAGCAGCGACTACTCGACCCGGAGCCACA
GCCGCAGCCCCAGCCCCGGCCACAGCCACGGGAGCTACAGCAGTCGCAGCCATGGGACCCGCAGCCGGACACGCAGCCCCTCGAGGACCCCCAGTCCCAGCTACCACAGCCGGAGCAGCTCTGAGAGC
GGGGGCTTCTGAGCCCAGACAGACTCAGCTTGGTGCCCCCCTGGCACTGGGAGAGGCGAGGGGCGGGCCCCAGGACCCCAGTGGGGAGGGGGCTATATCTCCTTGCCCCCAAGGCTACAAAGAGGTCT
CAGGGCCAGTGCACGGGCAGATGGGACCGGGGAAGACTTTGAGGGTGGGCATCCAGTGGACAAGGAGAAGCCAGATGTGCTGCTTCTACGGGTGTCCTCTCCCACCTCCTGTCCACCCACTGTGCCCG
GGGAACAAAGAGCCGTTACGAACACAGGAATCTCCCCATCCCCCTTCCTGCTGATGCCAACTCACCAGGCTTGGGACTGCTGCCGGTGGATGGTACCAGAGTCCATGATCTGCTCTGTCACTTCACCT
TAGCTCAGTGCAGCCAGGGACACCTTGCAAGGTGCCAGCCCTGGGAGCCCCTCTTCCGCACTACACAGCTCCCTCCACTCCTCTCTTATCACTGGGCAGACGAGGAGGTGGTACAGCACATGGGTTTG
GAGCTAGACAGAAGGAAGAACAGCCTAACCCTTGGTGCACCCCCATCCAAGCTGGGGAGCTGCATCCTTTTGAGCTGGCTGCAGGAGGACCCTGGCTGAGGGCTGGTGGCTGGCCCCACAGCCTCCCC
CAAGCTCCTCCACTGACCCAGGAGTGCCCAGACGGGTGGCCCCCAAAATCCCAGCCTGGGGAGCTAGGCACCTCACTCTTGGTCTGACCTCTCCAGGCCAGGCTCTCCTCACCCCATGCCCTGGGCCA
AGGTCCTACCAGCCATGACTACTGCATGACAAGAGGTGGGGGGTACAGACCTCAGGTACATTTGACCCTGAGGTTAAAAGGGGTTCAGGTCAAGAGGTGGGAGAGGAAAGGGGTAGATGGGAGGTGGA
ATCTGTAGGAAAGAGAAAAAGCAAAGTCGTTCACTGACTGAGTAGCCCCCAGGGAGTGGAGACGGGTCCCTGGGGAGGGAGCAGCTGACAGGTCAGCAGTGCCCCCAGCCCCACCCAAGAGGAGGGCA
GCGTGTGCCTGTGGTCTGGGACGTGGGCTGGATGGCAGCCCAGGGTCACAGGCATAGGATAACATGTGCTTTGGACCTGACAAGGGAGTACCTTGGGGGTCTGATGGGGTCATGGCCAGCCGAGCCTC
TGTAGAGATGGAGGCTACAGCCCTCAGAAGGGAGGGGAGGAAAGAGACTGAGGGCCCTGGCCTGGGGCGTCGATGGGGAAGCGGTGGCCCCCAGTCCTCTTCTGCTGCTCCCAGCCCCCTCCTCCTGG
GGCCCTCAGGGATCTCATGAAGTCTTCCTTGGCCCAACCAGGCAGATGCCCCGGGCTCCAGTGGGGGGAGGGGTCTGGGGTCTGGTCCGGGTTCCCCGCTTTCTCTATGTCCCCCCTCCCTCTTTCTC
CGCAGTGCGGATAAAAATTGGACTCGAATAAAACCCTTGGTGCCCGGA

hide sequence


Protein RefSeqs	NP_001103669	(Get FASTA)	NCBI Sequence Viewer
	NP_001278760	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A6NNA2	(Get FASTA)	NCBI Sequence Viewer
	BAC03922	(Get FASTA)	NCBI Sequence Viewer
	BAC04346	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000480851

RefSeq Acc Id:	NP_001103669 ⟸ NM_001110199
- Peptide Label:	isoform b
- UniProtKB:	A0A087WXA3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTVNNGAASMQSTPDAANGFPQPSSSSGTWPRAEEELRAAEPGLVKRAHREILDHERKRRVELKCMELQEMMEEQGYSEEEIRQKVGTFRQMLMEKEGVLTREDRPGGHIVAETPRLTEGAEPGLE YAPFDDDDGPVDCDCPASCYRGHRGYRTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHS SGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAG RRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRS AEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTRSRTRSPSRTPSP SYHSRSSSESGGF hide sequence

RefSeq Acc Id:

NP_001278760 ⟸ NM_001291831

- Peptide Label:

isoform a

- Sequence:

show sequence

MSSTVNNGAASMQSTPDAANGFPQPSSSSGTWPRAEEELRAAEPGLVKRAHREILDHERKRRVE
LKCMELQEMMEEQGYSEEEIRQKVGTFRQMLMEKEGVLTREDRPGGHIVAETPRLTEGAEPGLEYAPFDDDDGPVDCDCPASCYRGHRGYRTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECS
CGSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQR
SGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSE
RGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRI
TRSSLLSGLWSAWGPGGPLCTGCLGDAQRPQASYSILPAQPLFLLQLLEQRLLDPEPQPQPQPRPQPRELQQSQPWDPQPDTQPLEDPQSQLPQPEQL

hide sequence

Ensembl Acc Id:

ENSP00000483698 ⟸ ENST00000464752

Ensembl Acc Id:

ENSP00000480851 ⟸ ENST00000611745

Protein Domains

cwf21

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A6NNA2-F1-model_v2	AlphaFold	A6NNA2	1-597	view protein structure

RGD ID:

7210859

Promoter ID:

EPDNEW_H11175

Type:

initiation region

Name:

SRRM3_1

Description:

serine/arginine repetitive matrix 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	76,282,630 - 76,282,690	EPDNEW

Database	Acc Id	Source(s)
COSMIC	SRRM3	COSMIC
Ensembl Genes	ENSG00000177679	Ensembl, ENTREZGENE
Ensembl Transcript	ENST00000611745	ENTREZGENE
Gene3D-CATH	6.10.140.420	UniProtKB/Swiss-Prot
GTEx	ENSG00000177679	GTEx
HGNC ID	HGNC:26729	ENTREZGENE
Human Proteome Map	SRRM3	Human Proteome Map
InterPro	mRNA_splic_Cwf21_dom	UniProtKB/Swiss-Prot
	SRRM3_cwf21	UniProtKB/Swiss-Prot
	SRRM_C	UniProtKB/Swiss-Prot
	SRRM_Domain-Containing	UniProtKB/Swiss-Prot
NCBI Gene	222183	ENTREZGENE
PANTHER	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3	UniProtKB/Swiss-Prot
	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED	UniProtKB/Swiss-Prot
Pfam	cwf21	UniProtKB/Swiss-Prot
	SRRM_C	UniProtKB/Swiss-Prot
PharmGKB	PA165618294	PharmGKB
SMART	cwf21	UniProtKB/Swiss-Prot
UniProt	A0A087WXA3	ENTREZGENE, UniProtKB/TrEMBL
	A0A087X0W5_HUMAN	UniProtKB/TrEMBL
	A6NNA2	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A6ND75	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-07-27	SRRM3	serine/arginine repetitive matrix 3	FLJ37078	hypothetical protein FLJ37078	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Human Phenotype Annotations - ClinVar

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Imported Disease Annotations - ClinVar

Imported Human Phenotype Annotations - ClinVar