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Gene: Rtl4 (retrotransposon Gag like 4) Rattus norvegicus
Symbol: Rtl4
Name: retrotransposon Gag like 4
Description: Predicted to have nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in cognition and norepinephrine metabolic process. Orthologous to human RTL4 (retrotransposon Gag like 4); INTERACTS WITH bisphenol A; 1,2-dichloroethane (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC680778; similar to zinc finger, CCHC domain containing 5; Zcchc16; zinc finger CCHC domain-containing protein 16; zinc finger CCHC-type containing 16; zinc finger, CCHC domain containing 16
Homo sapiens (human) : RTL4 (retrotransposon Gag like 4)  HGNC  Alliance
Mus musculus (house mouse) : Rtl4 (retrotransposon Gag like 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rtl4 (retrotransposon Gag like 4)
Pan paniscus (bonobo/pygmy chimpanzee) : RTL4 (retrotransposon Gag like 4)
Canis lupus familiaris (dog) : RTL4 (retrotransposon Gag like 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rtl4 (retrotransposon Gag like 4)
Sus scrofa (pig) : RTL4 (retrotransposon Gag like 4)
Chlorocebus sabaeus (African green monkey) : RTL4 (retrotransposon Gag like 4)
Heterocephalus glaber (naked mole-rat) : Rtl4 (retrotransposon Gag like 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0X115,908,999 - 116,402,406 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX116,399,611 - 116,400,516 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X116,465,029 - 116,543,231 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X33,404,885 - 33,405,790 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX107,618,493 - 108,025,880 (+)NCBICelera
Cytogenetic MapXq34NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Rtl4
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588188
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.