Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: RTL4 (retrotransposon Gag like 4) Homo sapiens
Analyze
Symbol: RTL4
Name: retrotransposon Gag like 4
Description: Predicted to have nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in cognition and norepinephrine metabolic process; INTERACTS WITH aflatoxin B1; valproic acid; bisphenol A (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: FLJ46608; mammalian retrotransposon-derived 4; mammalian retrotransposon-derived protein 4; Mar4; Mart4; retrotransposon Gag-like protein 4; SIRH11; Sushi-Ichi retrotransposon homolog 11; ZCCHC16; zinc finger CCHC domain-containing protein 16; zinc finger CCHC-type containing 16; zinc finger, CCHC domain containing 16
Orthologs:
Mus musculus (house mouse) : Rtl4 (retrotransposon Gag like 4)  MGI  Alliance
Rattus norvegicus (Norway rat) : Rtl4 (retrotransposon Gag like 4)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rtl4 (retrotransposon Gag like 4)
Pan paniscus (bonobo/pygmy chimpanzee) : RTL4 (retrotransposon Gag like 4)
Canis lupus familiaris (dog) : RTL4 (retrotransposon Gag like 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rtl4 (retrotransposon Gag like 4)
Sus scrofa (pig) : RTL4 (retrotransposon Gag like 4)
Chlorocebus sabaeus (African green monkey) : RTL4 (retrotransposon Gag like 4)
Heterocephalus glaber (naked mole-rat) : Rtl4 (retrotransposon Gag like 4)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 EnsemblX112,454,500 - 112,457,112 (+)Ensembl
GRCh38X112,083,025 - 112,457,245 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X111,326,253 - 111,700,473 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X111,212,909 - 111,587,129 (+)NCBINCBI36hg18NCBI36
CeleraX111,805,763 - 112,184,591 (+)NCBI
Cytogenetic MapXq23NCBI
HuRefX100,946,374 - 101,322,365 (+)NCBIHuRef
CHM1_1X111,237,477 - 111,611,887 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on RTL4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1603494
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.