Gene: Or5d3 (olfactory receptor family 5 subfamily D member 3) Rattus norvegicus |
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Analyze |
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Symbol: |
Or5d3 |
Name: |
olfactory receptor family 5 subfamily D member 3 |
RGD ID: |
1586409 |
Description: |
INTERACTS WITH bisphenol A; ivermectin (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
LOC688691; olfactory receptor 5D13-like; similar to Olfactory receptor 5D13 |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 94,190,302 - 94,215,417 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 73,734,091 - 73,759,208 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 3 | 76,422,727 - 76,447,415 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 83,130,712 - 83,155,400 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 72,042,873 - 72,044,802 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 73,018,806 - 73,043,742 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q24 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
Or5d3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 94,190,302 - 94,215,417 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 73,734,091 - 73,759,208 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 3 | 76,422,727 - 76,447,415 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 83,130,712 - 83,155,400 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 72,042,873 - 72,044,802 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 73,018,806 - 73,043,742 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q24 | NCBI | | | | |
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OR5D3P (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 55,723,776 - 55,729,621 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 55,723,776 - 55,729,621 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 55,491,252 - 55,497,097 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 55,250,466 - 55,251,114 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 52,835,754 - 52,836,402 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q11 | NCBI | | | | | HuRef | 11 | 51,822,828 - 51,823,476 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 55,359,176 - 55,359,824 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 55,662,066 - 55,667,911 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Or5d3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 88,174,136 - 88,175,071 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 88,172,476 - 88,176,836 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 88,343,792 - 88,344,727 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 88,342,132 - 88,346,492 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 88,183,949 - 88,185,248 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 88,144,557 - 88,148,048 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 89,933,240 - 89,934,539 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | D | NCBI | | | | | cM Map | 2 | 49.98 | NCBI | | | | |
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OR5D3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 40,154,670 - 40,158,646 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 39,644,798 - 39,645,669 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 40,850,284 - 40,851,156 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 40,850,284 - 40,851,225 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 40,467,574 - 40,468,446 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 40,014,217 - 40,015,088 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 40,600,582 - 40,601,454 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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QTLs in Region (mRatBN7.2)
1300178 | Hrtrt4 | Heart rate QTL 4 | 3.74 | | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 3 | 43827364 | 90905114 | Rat | 61377 | Edpm3 | Estrogen-dependent pituitary mass QTL 3 | 7.05 | 0.038 | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 3 | 53184692 | 89878207 | Rat | 2301414 | Kidm37 | Kidney mass QTL 37 | | 0.001 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 70653097 | 121056321 | Rat | 1582238 | Bw68 | Body weight QTL 68 | 3.2 | 0.0064 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 53184593 | 115665732 | Rat | 1331795 | Rf30 | Renal function QTL 30 | 3.708 | | urine potassium amount (VT:0010539) | urine potassium level (CMO:0000128) | 3 | 39454637 | 89115240 | Rat | 1582239 | Epfw1 | Epididymal fat weight QTL 1 | 4.5 | 0.0006 | epididymal fat pad mass (VT:0010421) | epididymal fat pad weight to body weight ratio (CMO:0000658) | 3 | 53184593 | 115665732 | Rat | 70216 | Cm14 | Cardiac mass QTL 14 | 2.1 | | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 31172320 | 163586636 | Rat | 1354589 | Bw31 | Body weight QTL 31 | 3.3 | | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 33703347 | 78196190 | Rat | 2298542 | Neuinf11 | Neuroinflammation QTL 11 | 3.9 | | nervous system integrity trait (VT:0010566) | spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) | 3 | 15005422 | 76927699 | Rat | 2292591 | Esta4 | Estrogen-induced thymic atrophy QTL 4 | | | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 3 | 47233211 | 147415807 | Rat | 1358362 | Srcrt2 | Stress Responsive Cort QTL 2 | 2.78 | | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 3 | 38192233 | 133483320 | Rat | 737818 | Hcar12 | Hepatocarcinoma resistance QTL 12 | 2.6 | | liver integrity trait (VT:0010547) | volume of individual liver tumorous lesion (CMO:0001078) | 3 | 29463235 | 118376539 | Rat | 1582218 | Bw74 | Body weight QTL 74 | 3.9 | 0.0021 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 53184593 | 115665732 | Rat | 1331777 | Bw24 | Body weight QTL 24 | 3.503 | | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 39454637 | 89115240 | Rat | 1582221 | Kidm30 | Kidney mass QTL 30 | 3.5 | 0.0008 | kidney mass (VT:0002707) | both kidneys wet weight (CMO:0000085) | 3 | 64655305 | 115665732 | Rat | 631647 | Bp122 | Blood pressure QTL 122 | 6.2 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 30684642 | 75684642 | Rat | 1581568 | Rf53 | Renal function QTL 53 | | | urine total protein amount (VT:0000032) | urine protein excretion rate to body weight ratio (CMO:0001099) | 3 | 56395968 | 161299569 | Rat | 1582210 | Bw71 | Body weight QTL 71 | 3.3 | 0.0012 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 64655305 | 115665732 | Rat | 1300111 | Rf12 | Renal function QTL 12 | 3.78 | | renal blood flow trait (VT:2000006) | absolute change in renal blood flow rate (CMO:0001168) | 3 | 61017749 | 121056321 | Rat | 724523 | Tsu1 | Thymus enlargement suppressive QTL 1 | 3.84 | | thymus mass (VT:0004954) | thymus weight to body weight ratio (CMO:0000612) | 3 | 50437504 | 115638231 | Rat | 1600376 | Arunc5 | Aerobic running capacity QTL 5 | | 0.21 | exercise endurance trait (VT:0002332) | maximum distance run on treadmill (CMO:0001406) | 3 | 73376539 | 118376539 | Rat | 8662816 | Vetf4 | Vascular elastic tissue fragility QTL 4 | 4 | | renal artery integrity trait (VT:0010642) | number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563) | 3 | 59242096 | 157323038 | Rat | 1559282 | Emca5 | Estrogen-induced mammary cancer QTL 5 | 3.9 | | mammary gland integrity trait (VT:0010552) | percentage of study population developing mammary tumors during a period of time (CMO:0000948) | 3 | 43827364 | 169034231 | Rat | 1581503 | Cm58 | Cardiac mass QTL 58 | 2.7 | 0.05 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 43827364 | 121056321 | Rat | 2292613 | Ept16 | Estrogen-induced pituitary tumorigenesis QTL 16 | 8.3 | | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 3 | 47233430 | 110362260 | Rat | 731180 | Bp152 | Blood pressure QTL 152 | | 0.03 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 53781112 | 91609953 | Rat | 738019 | Anxrr10 | Anxiety related response QTL 10 | 3.9 | | exploratory behavior trait (VT:0010471) | number of entries into a discrete space in an experimental apparatus (CMO:0000960) | 3 | 38517803 | 83517803 | Rat | 631200 | Cm25 | Cardiac mass QTL 25 | 4.8 | 0.0001 | heart left ventricle mass (VT:0007031) | heart left ventricle wet weight (CMO:0000071) | 3 | 61134348 | 89115068 | Rat | 61419 | Cia11 | Collagen induced arthritis QTL 11 | 5.6 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 3 | 30356773 | 98535386 | Rat | 61356 | Bp37 | Blood pressure QTL 37 | 3 | | blood pressure trait (VT:0000183) | systolic blood pressure (CMO:0000004) | 3 | 30684642 | 75684642 | Rat | 12879848 | Bw181 | Body weght QTL 181 | | 0.015 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 70348525 | 121056321 | Rat | 1358905 | Hrtrt17 | Heart rate QTL 17 | 5.9 | 0.000014 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 3 | 10861912 | 89878372 | Rat | 2301971 | Cm71 | Cardiac mass QTL 71 | 4.63 | | heart left ventricle mass (VT:0007031) | heart left ventricle weight (CMO:0000776) | 3 | 41874578 | 155617519 | Rat | 1358885 | Bp251 | Blood pressure QTL 251 | 3.8 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 14489145 | 121056321 | Rat | 1354597 | Kidm13 | Kidney mass QTL 13 | 2.9 | | kidney mass (VT:0002707) | right kidney wet weight (CMO:0000082) | 3 | 41874578 | 104104347 | Rat | 2301970 | Bw81 | Body weight QTL 81 | 5.19 | | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 41874578 | 155617519 | Rat | 2290452 | Scl56 | Serum cholesterol level QTL 56 | 2.26 | | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 3 | 1 | 91609953 | Rat | 1354604 | Bw36 | Body weight QTL 36 | 2.9 | | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 33703347 | 104104347 | Rat | 631665 | Bw8 | Body weight QTL 8 | 5.5 | | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 50437042 | 119183768 | Rat | 1358888 | Bp264 | Blood pressure QTL 264 | 4.43 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 14489145 | 121056321 | Rat | 1358186 | Ept2 | Estrogen-induced pituitary tumorigenesis QTL 2 | 8.3 | | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 3 | 47233430 | 110362260 | Rat | |