Poglut2-ps1 (protein O-glucosyltransferase 2, pseudogene 1) - Rat Genome Database

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Gene: Poglut2-ps1 (protein O-glucosyltransferase 2, pseudogene 1) Rattus norvegicus
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Symbol: Poglut2-ps1
Name: protein O-glucosyltransferase 2, pseudogene 1
RGD ID: 1586206
Description:
Type: pseudo
RefSeq Status: INFERRED
Previously known as: LOC288331; similar to KDEL (Lys-Asp-Glu-Leu) containing 1
Related Functional Gene: Poglut2  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81121,995,255 - 21,997,249 (-)NCBIGRCr8
mRatBN7.2118,548,832 - 8,550,826 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1117,135,349 - 17,137,343 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0119,849,856 - 9,851,850 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0119,042,373 - 9,044,367 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0117,032,112 - 7,034,106 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01110,726,047 - 10,728,041 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4118,525,864 - 8,527,416 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera118,483,947 - 8,485,941 (-)NCBICelera
Cytogenetic Map11p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Poglut2-ps1
3 total Variants

The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)11121836709Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat







RefSeq Acc Id: XM_003751003   ⟹   XP_003751051
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.01110,726,217 - 10,727,769 (-)NCBI
RefSeq Acc Id: XM_003752469   ⟹   XP_003752517
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera118,484,117 - 8,485,669 (-)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-22278 BioCyc
NCBI Gene 288331 ENTREZGENE
PhenoGen Poglut2-ps1 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Poglut2-ps1  protein O-glucosyltransferase 2, pseudogene 1  LOC288331  similar to KDEL (Lys-Asp-Glu-Leu) containing 1  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC288331  similar to KDEL (Lys-Asp-Glu-Leu) containing 1      Symbol and Name status set to provisional 70820 PROVISIONAL