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Gene: Ppp1r42 (protein phosphatase 1, regulatory subunit 42) Rattus norvegicus
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Symbol: Ppp1r42
Name: protein phosphatase 1, regulatory subunit 42
RGD ID: 1585679
Description: Predicted to have actin binding activity; dynein complex binding activity; and tubulin binding activity. Predicted to be involved in regulation of phosphatase activity. Predicted to localize to centrosome and manchette. Orthologous to human PPP1R42 (protein phosphatase 1 regulatory subunit 42); INTERACTS WITH bisphenol A; flutamide; furan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC683514; LOC683514; uncharacterized protein LOC683514
Orthologs:
Homo sapiens (human) : PPP1R42 (protein phosphatase 1 regulatory subunit 42)  HGNC  Alliance
Mus musculus (house mouse) : Ppp1r42 (protein phosphatase 1, regulatory subunit 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ppp1r42 (protein phosphatase 1 regulatory subunit 42)
Pan paniscus (bonobo/pygmy chimpanzee) : PPP1R42 (protein phosphatase 1 regulatory subunit 42)
Canis lupus familiaris (dog) : PPP1R42 (protein phosphatase 1 regulatory subunit 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ppp1r42 (protein phosphatase 1 regulatory subunit 42)
Sus scrofa (pig) : PPP1R42 (protein phosphatase 1 regulatory subunit 42)
Chlorocebus sabaeus (African green monkey) : PPP1R42 (protein phosphatase 1 regulatory subunit 42)
Heterocephalus glaber (naked mole-rat) : Ppp1r42 (protein phosphatase 1 regulatory subunit 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.058,911,356 - 8,956,313 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl58,916,633 - 8,956,119 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0513,718,715 - 13,763,672 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.458,773,373 - 8,818,333 (+)NCBIRGSC3.4rn4RGSC3.4
Celera58,740,514 - 8,787,374 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ppp1r42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1585679
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.