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Gene: Clvs1 (clavesin 1) Rattus norvegicus
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Symbol: Clvs1
Name: clavesin 1
Description: Predicted to have phosphatidylinositol-3,5-bisphosphate binding activity. Involved in lysosome organization. Localizes to the clathrin-coated vesicle and trans-Golgi network. Orthologous to human CLVS1 (clavesin 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: clavesin-1; hypothetical protein LOC366311; LOC366311; retinaldehyde-binding protein 1-like 1; Retinaldehyde-binding protein 1-like protein 1; RGD1564200; Rlbp1l1; similar to hypothetical protein MGC34646
Orthologs:
Homo sapiens (human) : CLVS1 (clavesin 1)  HGNC  Alliance
Mus musculus (house mouse) : Clvs1 (clavesin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clvs1 (clavesin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLVS1 (clavesin 1)
Canis lupus familiaris (dog) : CLVS1 (clavesin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clvs1 (clavesin 1)
Sus scrofa (pig) : CLVS1 (clavesin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0522,380,318 - 22,580,391 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl522,380,334 - 22,578,297 (+)Ensembl
Rnor_5.0527,115,709 - 27,312,485 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4523,135,749 - 23,336,357 (+)NCBIRGSC3.4rn4RGSC3.4
Celera521,664,843 - 21,859,477 (+)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clvs1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564200
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.