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Gene: Colca2 (colorectal cancer associated 2) Rattus norvegicus
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Symbol: Colca2
Name: colorectal cancer associated 2
Description: Predicted to localize to the cytoplasm. Orthologous to human COLCA2 (colorectal cancer associated 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: MODEL
Also known as: colorectal cancer-associated protein 2; hypothetical LOC315652; LOC315652; RGD1563866
Orthologs:
Homo sapiens (human) : COLCA2 (colorectal cancer associated 2)  HGNC  Alliance
Mus musculus (house mouse) : Colca2 (COLCA2 homolog)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Colca2 (colorectal cancer associated 2)
Pan paniscus (bonobo/pygmy chimpanzee) : COLCA2 (colorectal cancer associated 2)
Canis lupus familiaris (dog) : COLCA2 (colorectal cancer associated 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Colca2 (colorectal cancer associated 2)
Sus scrofa (pig) : COLCA2 (colorectal cancer associated 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0855,674,561 - 55,682,811 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0854,269,344 - 54,278,320 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4854,601,616 - 54,606,203 (-)NCBIRGSC3.4rn4RGSC3.4
Celera851,133,639 - 51,141,573 (-)NCBICelera
Cytogenetic Map8q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Colca2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563866
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.