POU2AF3 (POU class 2 homeobox associating factor 3)

Gene: POU2AF3 (POU class 2 homeobox associating factor 3) Sus scrofa

Analyze

Symbol:

POU2AF3

Name:

POU class 2 homeobox associating factor 3

RGD ID:

14148282

Description:

ENCODES a protein that exhibits DNA binding (inferred); POU domain binding (inferred); transcription coactivator activity (inferred); INVOLVED IN positive regulation of DNA-templated transcription (inferred); ASSOCIATED WITH ataxia telangiectasia (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); Carney-Stratakis syndrome (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

COLCA2; colorectal cancer associated 2; colorectal cancer-associated protein 2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	39,071,706 - 39,081,486 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	39,071,994 - 39,081,493 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	43,906,134 - 43,915,519 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

ataxia telangiectasia (ISO)

BH4-deficient hyperphenylalaninemia A (ISO)

Carney-Stratakis syndrome (ISO)

Chromosome 11, Partial Trisomy 11q (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Pyruvate Dehydrogenase E2 Deficiency (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of DNA-templated transcription (IEA)

Cellular Component

cytoplasm (IEA)

nucleus (IEA)

Molecular Function

DNA binding (IEA)

POU domain binding (IEA)

protein binding (ISO)

transcription coactivator activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

POU2AF3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	39,071,706 - 39,081,486 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	39,071,994 - 39,081,493 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	43,906,134 - 43,915,519 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POU2AF3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	111,298,546 - 111,308,735 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	111,298,546 - 111,308,735 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	111,169,271 - 111,179,460 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	110,673,563 - 110,684,670 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	108,323,163 - 108,332,531 (+)	NCBI		Celera
Cytogenetic Map	11	q23.1	NCBI
HuRef	11	107,094,240 - 107,104,418 (+)	NCBI		HuRef
CHM1_1	11	111,052,408 - 111,062,597 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	111,308,735 - 111,318,916 (+)	NCBI		T2T-CHM13v2.0

Pou2af3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	51,181,558 - 51,189,865 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	51,181,558 - 51,190,951 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	51,270,258 - 51,278,565 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	51,270,258 - 51,278,569 (-)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	9	51,270,258 - 51,279,651 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	51,078,363 - 51,086,470 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	51,078,363 - 51,086,470 (-)	NCBI		MGSCv36	mm8
Celera	9	48,557,383 - 48,565,495 (-)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	28.02	NCBI

Pou2af3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	60,484,596 - 60,493,475 (-)	NCBI		GRCr8
mRatBN7.2	8	51,588,237 - 51,597,114 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	51,588,237 - 51,603,855 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	57,135,545 - 57,143,441 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	55,414,493 - 55,422,389 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	53,278,757 - 53,286,653 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	55,674,561 - 55,682,811 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	55,674,840 - 55,681,930 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	54,269,344 - 54,278,320 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	54,601,616 - 54,606,203 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	51,133,639 - 51,141,573 (-)	NCBI		Celera
Cytogenetic Map	8	q23	NCBI

Pou2af3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	13,090,206 - 13,098,826 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	13,090,206 - 13,098,642 (+)	NCBI	ChiLan1.0	ChiLan1.0

POU2AF3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	112,045,940 - 112,052,522 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	113,135,317 - 113,144,594 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	106,178,653 - 106,188,354 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	110,025,156 - 110,033,358 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	110,023,207 - 110,033,060 (+)	Ensembl	panpan1.1		panPan2

POU2AF3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	21,731,093 - 21,740,770 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	21,652,772 - 21,662,406 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	21,757,132 - 21,766,772 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	21,757,130 - 21,766,649 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	21,817,734 - 21,827,352 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	21,717,849 - 21,727,484 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	21,767,045 - 21,776,691 (-)	NCBI		UU_Cfam_GSD_1.0

Pou2af3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	93,599,333 - 93,607,217 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936612	3,098,392 - 3,107,299 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936612	3,098,426 - 3,106,983 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POU2AF3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	102,636,070 - 102,646,059 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666043	23,326,093 - 23,335,683 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pou2af3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	6,418,838 - 6,429,937 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624784	6,420,522 - 6,429,875 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in POU2AF3
232 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	9	2	3	5	1	23	2	3	2
Below cutoff	1	1			1				1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013989510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013989512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP565216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01083867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000016383 ⟹ ENSSSCP00000015942

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	39,072,963 - 39,081,485 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000059383 ⟹ ENSSSCP00000043466

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	39,071,706 - 39,081,486 (+)	Ensembl

RefSeq Acc Id:

XM_013989510 ⟹ XP_013844964

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,072,969 - 39,081,493 (+)	NCBI

Sequence:

show sequence

GGGAAAGATGGAGAGGGGGAAAGGCGGGGAGAAAGGGGCCGAGGGAGAGAAAGCAGACTGAGAA
AAAAGAAAAAAGACTGAGAGGGCGGGAGCTCTCGGGCTTCATCCCTTTACCGGGGTCTGTCTAG
CGGGTCTCTCACCAGCCCAAGGACGAGGCTGCCTCGGGGCCGGCTTCCAGGCCAAGAGCCTGTA
GATGTCAGAGGATCCCCAGAAACCACATCTGGCCTGGTGGAGCAGGAAGGGGCTCCGAGCTTCC
CCTGGAGCGGGAGTGGGGTGGGCTGGAGCAGCTGTTCTGGTGCTCGGCCCCATCCCAGGTTCCT
AACATCCTCTCCTCGCCCACAGCCCAGGTTTCCCTAACTCAGCCAAGGGGGTGGGCTCCCCTCG
TCTGGTCTGCACATTTCTGAGCACATGAACCTCTGTGCTATTGGTCTGGGGATAGGGCCCAGCC
TGGGGAGGGTGGCCTCACAGATTTCCATAGGTTTTGTTTCCACACGGACCCTGAAACCTGCCCA
CAGTCTCTCTTGTCCTTGTGAGTCTGAGAAATCTGGATTTCTTTCCCATCTGTCTTTGAGTGTG
CTTTTCGCATTCTCCAGACCTAGGCACCTGGCCTCAGGTGCCACGGTTTGTAAAGAAGACCCCC
CACCACCACCTCCCACACCCCCCACCACCTCCCCCCACACCCCAGCCTGACACCCAGACGTCAC
ACTTGATCACTGACTCGGTTGCCTTTCCCCAGAAAAACCTAAGGTGTATCAAGGTGTCCGGGTG
AAGATCACCGTGAAGGAGCTGCTGCAGCAAAGAAGGGCGCACCAGGCAGCCTCAGGGGGAACTG
AACAGGCAGAGCAAAGCGAACCCTACTTTGCTCTCAGGAAGATTCTCTCCACCCAGAGCCTCCC
AGGCACAGAGGAGTAATAGAGGGATGATTTAATTACGAGAGCCAGATGTAGCATCCCTCTCTGG
GAACCAACAGAAGGACCTGGGGGCCTAGGACAGCTCTGAGCTGTCCGGAGGCACCAGTGTCCAC
CTTGCAGATCCAGACTCACCATCTCCCTCAGGACTGTATTTTGAGCCTGAACCAATTCCTTCCA
TGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGTTGTGTTTCTTGTGAAGAAAACCCAAGCTG
CCTCGACCAGATCTTCGATTCCTACCTTCAGGCAGAGACACACCCGGACCCTTCACTCACTTCC
ATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTTCCAGGCTGCCCCTTTCTGCTTCAACCAGA
GCCTGACCCCAGGATCGCCTTCGGATTCCTCCACGCTCTCCGGTTCCTTAGACTGTAGTTACTC
TCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATTACGGCTCTCCGCCTTCTCTGGACCCCAGA
AACTGCGGCTACCCCTCAGAAGACTACCTGTACCCTCCCCTGCCCGTGCACGCCCAGTACGACT
GCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGTGCATCCTGCGAGGCCGAGCACCTGGACCC
CCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCACAGACTGTGTGACCTTCGCTCCCTCAGCG
ACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAACTGGGACACCTGCTATAGTTAATAGCAAG
GACATTAACTGGGAACCTTGGCATGCCTCTGGCCATTTTTTACCATCTCTCGAGGACAACTCAA
AATGTTCAGCCCGGTAACAAGATGACGCAGGCACAGGGGTACCTGTCACCATTTTCAATTTTCC
GACACTACTTTAGGCATGAAGAGGAAGTCCCCAGAGCCATTCCTAGTGCCACTCCTACTTTGTC
TGCTTTCAGTTAAAATTCATGTAGGGAACATACCATTGTTTTACTTTCCTGTGTAACGAACAAA
GGCTAGTTTTTTTTAAACTAATAAATAATTTTGTATCATTAAAA

hide sequence

RefSeq Acc Id:

XM_013989512 ⟹ XP_013844966

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,073,956 - 39,081,493 (+)	NCBI

Sequence:

show sequence

TTCACCACAGGACCTCACAGAGAAGAGCTGGGGTGTGCTGTGGGGCTCAGGATTTGGAGGAGCC
CCTCCCTGTCTGATCATACTTGAGTATTAGAGGGTGTTGGTCCATTGCAGAGAGAGGAGCAGGC
AGCAGCTGTCCGGAGGCACCAGTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGACT
GTATTTTGAGCCTGAACCAATTCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGT
TGTGTTTCTTGTGAAGAAAACCCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCAG
AGACACACCCGGACCCTTCACTCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTT
CCAGGCTGCCCCTTTCTGCTTCAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCACG
CTCTCCGGTTCCTTAGACTGTAGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATT
ACGGCTCTCCGCCTTCTCTGGACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACCC
TCCCCTGCCCGTGCACGCCCAGTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGT
GCATCCTGCGAGGCCGAGCACCTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCA
CAGACTGTGTGACCTTCGCTCCCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAA
CTGGGACACCTGCTATAGTTAATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCCA
TTTTTTACCATCTCTCGAGGACAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCACA
GGGGTACCTGTCACCATTTTCAATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAGA
GCCATTCCTAGTGCCACTCCTACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACCA
TTGTTTTACTTTCCTGTGTAACGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGTA
TCATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062756 ⟹ XP_020918415

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,072,969 - 39,081,493 (+)	NCBI

Sequence:

show sequence

GGGAAAGATGGAGAGGGGGAAAGGCGGGGAGAAAGGGGCCGAGGGAGAGAAAGCAGACTGAGAA
AAAAGAAAAAAGACTGAGAGGGCGGGAGCTCTCGGGCTTCATCCCTTTACCGGGGTCTGTCTAG
CGGGTCTCTCACCAGCCCAAGGACGAGGCTGCCTCGGGGCCGGCTTCCAGGCCAAGAGCCTGTA
GATGTCAGAGGATCCCCAGAAACCACATCTGGCCTGGTGGAGCAGGAAGGGGCTCCGAGCTTCC
CCTGGAGCGGGAGTGGGGTGGGCTGGAGCAGCTGTTCTGGTGCTCGGCCCCATCCCAGGTTCCT
AACATCCTCTCCTCGCCCACAGCCCAGGTTTCCCTAACTCAGCCAAGGGGGTGGGCTCCCCTCG
TCTGGTCTGCACATTTCTGAGCACATGAACCTCTGTGCTATTGGTCTGGGGATAGGGCCCAGCC
TGGGGAGGGTGGCCTCACAGATTTCCATAGGTTTTGTTTCCACACGGACCCTGAAACCTGCCCA
CAGTCTCTCTTGTCCTTGTGAGTCTGAGAAATCTGGATTTCTTTCCCATCTGTCTTTGAGTGTG
CTTTTCGCATTCTCCAGACCTAGGCACCTGGCCTCAGGTGCCACGGTTTGTAAAGAAGACCCCC
CACCACCACCTCCCACACCCCCCACCACCTCCCCCCACACCCCAGCCTGACACCCAGACGTCAC
ACTTGATCACTGACTCGGTTGCCTTTCCCCAGAAAAACCTAAGGTGTATCAAGGTGTCCGGGTG
AAGATCACCGTGAAGGAGCTGCTGCAGCAAAGAAGGGCGCACCAGGCAGCCTCAGGGGGAACTG
AAGACAGCGTATGTGTGCCCTCTCATCCGCAAAGAAAATCTCTCCCGGAAACTTCCTTTTCGGG
AGCCCTTCAAGGAGAGAGTATCTGTGGAACATCCCCCCTCCCTCTTCACTCTTCTGGAACCCAG
CCTCTGAGGTCTTTGATCTGAACAGGCAGAGCAAAGCGAACCCTACTTTGCTCTCAGGAAGATT
CTCTCCACCCAGAGCCTCCCAGGCACAGAGGAGTAATAGAGGGATGATTTAATTACGAGAGCCA
GATGTAGCATCCCTCTCTGGGAACCAACAGAAGGACCTGGGGGCCTAGGACAGCTCTGAGCTGT
CCGGAGGCACCAGTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGACTGTATTTTGA
GCCTGAACCAATTCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGTTGTGTTTCT
TGTGAAGAAAACCCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCAGAGACACACC
CGGACCCTTCACTCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTTCCAGGCTGC
CCCTTTCTGCTTCAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCACGCTCTCCGGT
TCCTTAGACTGTAGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATTACGGCTCTC
CGCCTTCTCTGGACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACCCTCCCCTGCC
CGTGCACGCCCAGTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGTGCATCCTGC
GAGGCCGAGCACCTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCACAGACTGTG
TGACCTTCGCTCCCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAACTGGGACAC
CTGCTATAGTTAATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCCATTTTTTACC
ATCTCTCGAGGACAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCACAGGGGTACCT
GTCACCATTTTCAATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAGAGCCATTCCT
AGTGCCACTCCTACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACCATTGTTTTAC
TTTCCTGTGTAACGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGTATCATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062757 ⟹ XP_020918416

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,072,969 - 39,081,493 (+)	NCBI

Sequence:

show sequence

GGGAAAGATGGAGAGGGGGAAAGGCGGGGAGAAAGGGGCCGAGGGAGAGAAAGCAGACTGAGAA
AAAAGAAAAAAGACTGAGAGGGCGGGAGCTCTCGGGCTTCATCCCTTTACCGGGGTCTGTCTAG
CGGGTCTCTCACCAGCCCAAGGACGAGGCTGCCTCGGGGCCGGCTTCCAGGCCAAGAGCCTGTA
GATGTCAGAGGATCCCCAGAAACCACATCTGGCCTGGTGGAGCAGGAAGGGGCTCCGAGCTTCC
CCTGGAGCGGGAGTGGGGTGGGCTGGAGCAGCTGTTCTGGTGCTCGGCCCCATCCCAGGTTCCT
AACATCCTCTCCTCGCCCACAGCCCAGGTTTCCCTAACTCAGCCAAGGGGGTGGGCTCCCCTCG
TCTGGTCTGCACATTTCTGAGCACATGAACCTCTGTGCTATTGGTCTGGGGATAGGGCCCAGCC
TGGGGAGGGTGGCCTCACAGATTTCCATAGGTTTTGTTTCCACACGGACCCTGAAACCTGCCCA
CAGTCTCTCTTGTCCTTAAAAACCTAAGGTGTATCAAGGTGTCCGGGTGAAGATCACCGTGAAG
GAGCTGCTGCAGCAAAGAAGGGCGCACCAGGCAGCCTCAGGGGGAACTGAAGACAGCGTATGTG
TGCCCTCTCATCCGCAAAGAAAATCTCTCCCGGAAACTTCCTTTTCGGGAGCCCTTCAAGGAGA
GAGTATCTGTGGAACATCCCCCCTCCCTCTTCACTCTTCTGGAACCCAGCCTCTGAGGTCTTTG
ATCTCTGTCCGGAGGCACCAGTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGACTG
TATTTTGAGCCTGAACCAATTCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGTT
GTGTTTCTTGTGAAGAAAACCCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCAGA
GACACACCCGGACCCTTCACTCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTTC
CAGGCTGCCCCTTTCTGCTTCAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCACGC
TCTCCGGTTCCTTAGACTGTAGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATTA
CGGCTCTCCGCCTTCTCTGGACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACCCT
CCCCTGCCCGTGCACGCCCAGTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGTG
CATCCTGCGAGGCCGAGCACCTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCAC
AGACTGTGTGACCTTCGCTCCCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAAC
TGGGACACCTGCTATAGTTAATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCCAT
TTTTTACCATCTCTCGAGGACAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCACAG
GGGTACCTGTCACCATTTTCAATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAGAG
CCATTCCTAGTGCCACTCCTACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACCAT
TGTTTTACTTTCCTGTGTAACGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGTAT
CATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062758 ⟹ XP_020918417

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,071,994 - 39,081,493 (+)	NCBI

Sequence:

show sequence

AGGGCACGGGCCACTCTGCGGCCGCTCCCATTCGGCGCCTGCTCCCCAGGGCAGAGGCCCTGAG
GCCCAGTTGGCCGCTACAACCTCCGAGTAGCCGGGTCCACCACCGGCCTTAAGCTTGGCCACAG
CTGTGACCCTGGGACTTCGCAGCGCGGACTCTGCGCGCCCAGCAGCGGCGGCGGGGGGAGCCAG
AGGCTCACGAAAAACCTAAGGTGTATCAAGGTGTCCGGGTGAAGATCACCGTGAAGGAGCTGCT
GCAGCAAAGAAGGGCGCACCAGGCAGCCTCAGGGGGAACTGAAGACAGCGTATGTGTGCCCTCT
CATCCGCAAAGAAAATCTCTCCCGGAAACTTCCTTTTCGGGAGCCCTTCAAGGAGAGAGTATCT
GTGGAACATCCCCCCTCCCTCTTCACTCTTCTGGAACCCAGCCTCTGAGGTCTTTGATCTCTGT
CCGGAGGCACCAGTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGACTGTATTTTGA
GCCTGAACCAATTCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGTTGTGTTTCT
TGTGAAGAAAACCCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCAGAGACACACC
CGGACCCTTCACTCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTTCCAGGCTGC
CCCTTTCTGCTTCAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCACGCTCTCCGGT
TCCTTAGACTGTAGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATTACGGCTCTC
CGCCTTCTCTGGACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACCCTCCCCTGCC
CGTGCACGCCCAGTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGTGCATCCTGC
GAGGCCGAGCACCTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCACAGACTGTG
TGACCTTCGCTCCCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAACTGGGACAC
CTGCTATAGTTAATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCCATTTTTTACC
ATCTCTCGAGGACAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCACAGGGGTACCT
GTCACCATTTTCAATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAGAGCCATTCCT
AGTGCCACTCCTACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACCATTGTTTTAC
TTTCCTGTGTAACGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGTATCATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062759 ⟹ XP_020918418

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,072,969 - 39,081,493 (+)	NCBI

Sequence:

show sequence

GGGAAAGATGGAGAGGGGGAAAGGCGGGGAGAAAGGGGCCGAGGGAGAGAAAGCAGACTGAGAA
AAAAGAAAAAAGACTGAGAGGGCGGGAGCTCTCGGGCTTCATCCCTTTACCGGGGTCTGTCTAG
CGGGTCTCTCACCAGCCCAAGGACGAGGCTGCCTCGGGGCCGGCTTCCAGGCCAAGAGCCTGTA
GATGTCAGAGGATCCCCAGAAACCACATCTGGCCTGGTGGAGCAGGAAGGGGCTCCGAGCTTCC
CCTGGAGCGGGAGTGGGGTGGGCTGGAGCAGCTGTTCTGGTGCTCGGCCCCATCCCAGGTTCCT
AACATCCTCTCCTCGCCCACAGCCCAGGTTTCCCTAACTCAGCCAAGGGGGTGGGCTCCCCTCG
TCTGGTCTGCACATTTCTGAGCACATGAACCTCTGTGCTATTGGTCTGGGGATAGGGCCCAGCC
TGGGGAGGGTGGCCTCACAGATTTCCATAGGTTTTGTTTCCACACGGACCCTGAAACCTGCCCA
CAGTCTCTCTTGTCCTTAAAAACCTAAGGTGTATCAAGGTGTCCGGGTGAAGATCACCGTGAAG
GAGCTGCTGCAGCAAAGAAGGGCGCACCAGGCAGCCTCAGGGGGAACTCTGTCCGGAGGCACCA
GTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGACTGTATTTTGAGCCTGAACCAAT
TCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGTTGTGTTTCTTGTGAAGAAAAC
CCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCAGAGACACACCCGGACCCTTCAC
TCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTTCCAGGCTGCCCCTTTCTGCTT
CAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCACGCTCTCCGGTTCCTTAGACTGT
AGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATTACGGCTCTCCGCCTTCTCTGG
ACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACCCTCCCCTGCCCGTGCACGCCCA
GTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGTGCATCCTGCGAGGCCGAGCAC
CTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCACAGACTGTGTGACCTTCGCTC
CCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAACTGGGACACCTGCTATAGTTA
ATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCCATTTTTTACCATCTCTCGAGGA
CAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCACAGGGGTACCTGTCACCATTTTC
AATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAGAGCCATTCCTAGTGCCACTCCT
ACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACCATTGTTTTACTTTCCTGTGTAA
CGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGTATCATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062760 ⟹ XP_020918419

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,072,969 - 39,081,493 (+)	NCBI

Sequence:

show sequence

GGGAAAGATGGAGAGGGGGAAAGGCGGGGAGAAAGGGGCCGAGGGAGAGAAAGCAGACTGAGAA
AAAAGAAAAAAGACTGAGAGGGCGGGAGCTCTCGGGCTTCATCCCTTTACCGGGGTCTGTCTAG
CGGGTCTCTCACCAGCCCAAGGACGAGGCTGCCTCGGGGCCGGCTTCCAGGCCAAGAGCCTGTA
GATGTCAGAGGATCCCCAGAAACCACATCTGGCCTGGTGGAGCAGGAAGGGGCTCCGAGCTTCC
CCTGGAGCGGGAGTGGGGTGGGCTGGAGCAGCTGTTCTGGTGCTCGGCCCCATCCCAGGTTCCT
AACATCCTCTCCTCGCCCACAGCCCAGGTTTCCCTAACTCAGCCAAGGGGGTGGGCTCCCCTCG
TCTGGTCTGCACATTTCTGAGCACATGAACCTCTGTGCTATTGGTCTGGGGATAGGGCCCAGCC
TGGGGAGGGTGGCCTCACAGATTTCCATAGGTTTTGTTTCCACACGGACCCTGAAACCTGCCCA
CAGTCTCTCTTGTCCTTAAAAACCTAAGGTGTATCAAGGTGTCCGGGTGAAGATCACCGTGAAG
GAGCTGCTGCAGCAAAGAAGGGCGCACCAGGCAGCCTCAGGGGGAACTGAACAGGCAGAGCAAA
GCGAACCCTACTTTGCTCTCAGGAAGATTCTCTCCACCCAGAGCCTCCCAGGCACAGAGGAGTA
ATAGAGGGATGATTTAATTACGAGAGCCAGATGTAGCATCCCTCTCTGGGAACCAACAGAAGGA
CCTGGGGGCCTAGGACAGCTCTGAGCTGTCCGGAGGCACCAGTGTCCACCTTGCAGATCCAGAC
TCACCATCTCCCTCAGGACTGTATTTTGAGCCTGAACCAATTCCTTCCATGCCCAATTATTTCC
AGCCCCGAGAATTCTCCAGTTGTGTTTCTTGTGAAGAAAACCCAAGCTGCCTCGACCAGATCTT
CGATTCCTACCTTCAGGCAGAGACACACCCGGACCCTTCACTCACTTCCATGCAAAGTACTCCC
CACTGTTTCCCAGACAGCTTCCAGGCTGCCCCTTTCTGCTTCAACCAGAGCCTGACCCCAGGAT
CGCCTTCGGATTCCTCCACGCTCTCCGGTTCCTTAGACTGTAGTTACTCTCCTGCTCAGCTCCC
TGCGTGTGCTCCGGAGAATTACGGCTCTCCGCCTTCTCTGGACCCCAGAAACTGCGGCTACCCC
TCAGAAGACTACCTGTACCCTCCCCTGCCCGTGCACGCCCAGTACGACTGCTTCTCCACCGCCC
CTGCCTCGGTCTGCTGCTGTGCATCCTGCGAGGCCGAGCACCTGGACCCCCTCCGAGCTTCCGA
GTATTTTTCCTACCCCAGCACAGACTGTGTGACCTTCGCTCCCTCAGCGACAGCAGGCAGCGAT
TTCTACAAGAGGGAAACAAACTGGGACACCTGCTATAGTTAATAGCAAGGACATTAACTGGGAA
CCTTGGCATGCCTCTGGCCATTTTTTACCATCTCTCGAGGACAACTCAAAATGTTCAGCCCGGT
AACAAGATGACGCAGGCACAGGGGTACCTGTCACCATTTTCAATTTTCCGACACTACTTTAGGC
ATGAAGAGGAAGTCCCCAGAGCCATTCCTAGTGCCACTCCTACTTTGTCTGCTTTCAGTTAAAA
TTCATGTAGGGAACATACCATTGTTTTACTTTCCTGTGTAACGAACAAAGGCTAGTTTTTTTTA
AACTAATAAATAATTTTGTATCATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062761 ⟹ XP_020918420

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,076,969 - 39,081,493 (+)	NCBI

Sequence:

show sequence

CCTAAAGAAAAAAAAAAAAAAAAAAGGCCTAAATTACTTGTACAGTTAATCAATTTAACTGGAA
GACACGGGCTGCTTTACTTTGAATAGTTAGAAGAAACAGTCTCCAAAATTTCAGCTGTCCGGAG
GCACCAGTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGACTGTATTTTGAGCCTGA
ACCAATTCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAGTTGTGTTTCTTGTGAA
GAAAACCCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCAGAGACACACCCGGACC
CTTCACTCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCTTCCAGGCTGCCCCTTT
CTGCTTCAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCACGCTCTCCGGTTCCTTA
GACTGTAGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAATTACGGCTCTCCGCCTT
CTCTGGACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACCCTCCCCTGCCCGTGCA
CGCCCAGTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTGTGCATCCTGCGAGGCC
GAGCACCTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGCACAGACTGTGTGACCT
TCGCTCCCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAAACTGGGACACCTGCTA
TAGTTAATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCCATTTTTTACCATCTCT
CGAGGACAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCACAGGGGTACCTGTCACC
ATTTTCAATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAGAGCCATTCCTAGTGCC
ACTCCTACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACCATTGTTTTACTTTCCT
GTGTAACGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGTATCATTAAAA

hide sequence

RefSeq Acc Id:

XM_021062762 ⟹ XP_020918421

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	39,076,024 - 39,081,493 (+)	NCBI

Sequence:

show sequence

TCTAACCCGAGATCATCTCCGATTTGTTCAGTGGTTGAAGGATGTCTCTGGAAAGCTTTAAGTC
AAGGAAAGAGTTAATGTTATCAAATACGGGAAGCAGGAAGAAATGTGTCATCATTTGTCATAAA
GTCAGAGCAATATGCAGTTTGAAATTTTAAGAAGGCAGTCCTGAATTGAGACAAATGTTAGGGT
CTCAAAACAGGGCCAGGAGCCAGGAGAAACATGTGCATGCCAGATTTGTAAATTTGGTTTAGAA
ACTGAACTTCAGCCGGATCCGTTTACAAACAGCCTCATACATGTACACGCGTGCGCACACCCAC
CTCCTACCTTTAGGATAAAGGGAAACTTAAAGTTAGTACTTATCCAAAGATATAATTTAGCGTT
TTTTCGACCACTAATTTTTTTTTCTTTAAACAGCCTTGGTGCGTTTTTATAAATTGTAGATTTG
GGATTTTGGTGCTGTTGGAAATCTAAGAGAGAGAAGTCTTTCTTTGTATTCTTGCAGCAAAGTA
AGTGAGGGAACCCATGACTAGAAAGATAATATCAAGTAGGATATTGTAAACATACCTGAGGGAG
ATAACCTGGGGAGGCCTACAAACAGACCGTTCCCGGGGAGGCCTGGGCTTACTGAGAGCTCCAC
AATGAAGCCGGGTTTTTCAAACCCATTCCTTCCAAGTGCTTGAGCTCAAGCTGCAGCCAAATAT
TTGCATAAAGAGCTGGTGAAGGCTTCCAGCTTCCTGGTTCATGACATTACAGCGTGGATCATTT
TCAAAATTAACACCACCTCCTGTTTGAGCAGCGGCTGGCCGTGCAGTCCCCGGTGGCTTGATGT
GCTGGACTGTCCGGAGGCACCAGTGTCCACCTTGCAGATCCAGACTCACCATCTCCCTCAGGAC
TGTATTTTGAGCCTGAACCAATTCCTTCCATGCCCAATTATTTCCAGCCCCGAGAATTCTCCAG
TTGTGTTTCTTGTGAAGAAAACCCAAGCTGCCTCGACCAGATCTTCGATTCCTACCTTCAGGCA
GAGACACACCCGGACCCTTCACTCACTTCCATGCAAAGTACTCCCCACTGTTTCCCAGACAGCT
TCCAGGCTGCCCCTTTCTGCTTCAACCAGAGCCTGACCCCAGGATCGCCTTCGGATTCCTCCAC
GCTCTCCGGTTCCTTAGACTGTAGTTACTCTCCTGCTCAGCTCCCTGCGTGTGCTCCGGAGAAT
TACGGCTCTCCGCCTTCTCTGGACCCCAGAAACTGCGGCTACCCCTCAGAAGACTACCTGTACC
CTCCCCTGCCCGTGCACGCCCAGTACGACTGCTTCTCCACCGCCCCTGCCTCGGTCTGCTGCTG
TGCATCCTGCGAGGCCGAGCACCTGGACCCCCTCCGAGCTTCCGAGTATTTTTCCTACCCCAGC
ACAGACTGTGTGACCTTCGCTCCCTCAGCGACAGCAGGCAGCGATTTCTACAAGAGGGAAACAA
ACTGGGACACCTGCTATAGTTAATAGCAAGGACATTAACTGGGAACCTTGGCATGCCTCTGGCC
ATTTTTTACCATCTCTCGAGGACAACTCAAAATGTTCAGCCCGGTAACAAGATGACGCAGGCAC
AGGGGTACCTGTCACCATTTTCAATTTTCCGACACTACTTTAGGCATGAAGAGGAAGTCCCCAG
AGCCATTCCTAGTGCCACTCCTACTTTGTCTGCTTTCAGTTAAAATTCATGTAGGGAACATACC
ATTGTTTTACTTTCCTGTGTAACGAACAAAGGCTAGTTTTTTTTAAACTAATAAATAATTTTGT
ATCATTAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013844964	(Get FASTA)	NCBI Sequence Viewer
	XP_013844966	(Get FASTA)	NCBI Sequence Viewer
	XP_020918415	(Get FASTA)	NCBI Sequence Viewer
	XP_020918416	(Get FASTA)	NCBI Sequence Viewer
	XP_020918417	(Get FASTA)	NCBI Sequence Viewer
	XP_020918418	(Get FASTA)	NCBI Sequence Viewer
	XP_020918419	(Get FASTA)	NCBI Sequence Viewer
	XP_020918420	(Get FASTA)	NCBI Sequence Viewer
	XP_020918421	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000015942
	ENSSSCP00000015942.2
	ENSSSCP00000043466.2
	ENSSSCP00005026932.1
	ENSSSCP00015006319.1
	ENSSSCP00025020745.1
	ENSSSCP00030046715.1
	ENSSSCP00035033644.1
	ENSSSCP00040032265.1
	ENSSSCP00045005786.1
	ENSSSCP00050015153.1
	ENSSSCP00055024736.1
	ENSSSCP00060033759.1
	ENSSSCP00070014347.1
	ENSSSCP00070014359.1
	ENSSSCP00070014363.1

RefSeq Acc Id:	XP_020918417 ⟸ XM_021062758
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_020918415 ⟸ XM_021062756
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_013844964 ⟸ XM_013989510
- UniProtKB:	F1SV00 (UniProtKB/TrEMBL), A0A4X1TGD3 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_020918416 ⟸ XM_021062757
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_020918419 ⟸ XM_021062760
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_020918418 ⟸ XM_021062759
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_013844966 ⟸ XM_013989512
- UniProtKB:	F1SV00 (UniProtKB/TrEMBL), A0A4X1TGD3 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_020918421 ⟸ XM_021062762
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:	XP_020918420 ⟸ XM_021062761
- UniProtKB:	A0A4X1TGD3 (UniProtKB/TrEMBL), F1SV00 (UniProtKB/TrEMBL), A0A8D0Y643 (UniProtKB/TrEMBL), A0A8D0MQ28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPNYFQPREFSSCVSCEENPSCLDQIFDSYLQAETHPDPSLTSMQSTPHCFPDSFQAAPFCFNQ SLTPGSPSDSSTLSGSLDCSYSPAQLPACAPENYGSPPSLDPRNCGYPSEDYLYPPLPVHAQYD CFSTAPASVCCCASCEAEHLDPLRASEYFSYPSTDCVTFAPSATAGSDFYKRETNWDTCYS hide sequence

RefSeq Acc Id:

ENSSSCP00000015942 ⟸ ENSSSCT00000016383

RefSeq Acc Id:

ENSSSCP00000043466 ⟸ ENSSSCT00000059383

Protein Domains

OCA

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000015019	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005027692	UniProtKB/TrEMBL
	ENSSSCG00015012277	UniProtKB/TrEMBL
	ENSSSCG00025035459	UniProtKB/TrEMBL
	ENSSSCG00030072296	UniProtKB/TrEMBL
	ENSSSCG00035060608	UniProtKB/TrEMBL
	ENSSSCG00040055250	UniProtKB/TrEMBL
	ENSSSCG00045005131	UniProtKB/TrEMBL
	ENSSSCG00050027086	UniProtKB/TrEMBL
	ENSSSCG00055015757	UniProtKB/TrEMBL
	ENSSSCG00060057332	UniProtKB/TrEMBL
	ENSSSCG00070008951	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000016383	ENTREZGENE
	ENSSSCT00000016383.5	UniProtKB/TrEMBL
	ENSSSCT00000059383.3	UniProtKB/TrEMBL
	ENSSSCT00005043956.1	UniProtKB/TrEMBL
	ENSSSCT00015016214.1	UniProtKB/TrEMBL
	ENSSSCT00025048409.1	UniProtKB/TrEMBL
	ENSSSCT00030101270.1	UniProtKB/TrEMBL
	ENSSSCT00035081355.1	UniProtKB/TrEMBL
	ENSSSCT00040075188.1	UniProtKB/TrEMBL
	ENSSSCT00045008542.1	UniProtKB/TrEMBL
	ENSSSCT00050036449.1	UniProtKB/TrEMBL
	ENSSSCT00055031071.1	UniProtKB/TrEMBL
	ENSSSCT00060078124.1	UniProtKB/TrEMBL
	ENSSSCT00070017334.1	UniProtKB/TrEMBL
	ENSSSCT00070017347.1	UniProtKB/TrEMBL
	ENSSSCT00070017353.1	UniProtKB/TrEMBL
InterPro	COLCA2	UniProtKB/TrEMBL
	OCA	UniProtKB/TrEMBL
KEGG Report	ssc:100512618	UniProtKB/TrEMBL
NCBI Gene	COLCA2	ENTREZGENE
PANTHER	COLCA2 HOMOLOG	UniProtKB/TrEMBL
	PTHR36689	UniProtKB/TrEMBL
PROSITE	OCA	UniProtKB/TrEMBL
UniProt	A0A287AHK0_PIG	UniProtKB/TrEMBL
	A0A4X1TGD3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0MQ28	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0Y643	ENTREZGENE, UniProtKB/TrEMBL
	F1SV00	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-14	POU2AF3	POU class 2 homeobox associating factor 3	COLCA2	colorectal cancer associated 2	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar