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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Wnk3 | Rat | Prieto syndrome | | ISO | RGD:1346670 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Wnk3 | Rat | Prieto syndrome | | ISO | RGD:1346670 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:15632090 | PMID:16275913 | PMID:16501604 | PMID:17673510 | PMID:17975670 | PMID:18768590 | PMID:21317537 | PMID:21613606 | PMID:23482566 | PMID:27782176 | PMID:32589890 | PMID:34626749 |
Wnk3 (Rattus norvegicus - Norway rat) |
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WNK3 (Homo sapiens - human) |
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Wnk3 (Mus musculus - house mouse) |
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Wnk3 (Chinchilla lanigera - long-tailed chinchilla) |
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WNK3 (Pan paniscus - bonobo/pygmy chimpanzee) |
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WNK3 (Canis lupus familiaris - dog) |
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Wnk3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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WNK3 (Sus scrofa - pig) |
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WNK3 (Chlorocebus sabaeus - green monkey) |
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Wnk3 (Heterocephalus glaber - naked mole-rat) |
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Variants in Wnk3
379 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
MARC_6238-6239:992007182:3 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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7 | 9 | 44 | 113 | 67 | 66 | 35 | 23 | 35 | 6 | 182 | 88 | 93 | 44 | 60 | 31 |
RefSeq Transcripts | NM_001163607 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001411818 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006256783 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008773114 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008773116 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008773117 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008773118 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017602070 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017602071 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039099805 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039099806 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063280058 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063280059 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | CH474063 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAXUCZ010000021 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000047444 ⟹ ENSRNOP00000042493 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000082177 ⟹ ENSRNOP00000072423 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000093162 ⟹ ENSRNOP00000076217 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000093675 ⟹ ENSRNOP00000076151 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001163607 ⟹ NP_001157079 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001411818 ⟹ NP_001398747 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_006256783 ⟹ XP_006256845 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_008773116 ⟹ XP_008771338 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_008773117 ⟹ XP_008771339 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_008773118 ⟹ XP_008771340 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017602071 ⟹ XP_017457560 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039099805 ⟹ XP_038955733 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039099806 ⟹ XP_038955734 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063280058 ⟹ XP_063136128 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063280059 ⟹ XP_063136129 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001157079 | (Get FASTA) | NCBI Sequence Viewer |
NP_001398747 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006256845 | (Get FASTA) | NCBI Sequence Viewer | |
XP_008771338 | (Get FASTA) | NCBI Sequence Viewer | |
XP_008771339 | (Get FASTA) | NCBI Sequence Viewer | |
XP_008771340 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017457560 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038955733 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038955734 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063136128 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063136129 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | EDL86318 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSRNOP00000042493 | ||
ENSRNOP00000042493.3 | |||
ENSRNOP00000072423 | |||
ENSRNOP00000072423.2 | |||
ENSRNOP00000076151 | |||
ENSRNOP00000076151.2 |
RefSeq Acc Id: | NP_001157079 ⟸ NM_001163607 |
- Peptide Label: | isoform 2 |
- UniProtKB: | D4A7Z8 (UniProtKB/TrEMBL), A6KLA2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006256845 ⟸ XM_006256783 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A1W2Q671 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_008771338 ⟸ XM_008773116 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | XP_008771339 ⟸ XM_008773117 |
- Peptide Label: | isoform X4 |
- Sequence: |
RefSeq Acc Id: | XP_008771340 ⟸ XM_008773118 |
- Peptide Label: | isoform X5 |
- Sequence: |
RefSeq Acc Id: | XP_017457560 ⟸ XM_017602071 |
- Peptide Label: | isoform X3 |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000072423 ⟸ ENSRNOT00000082177 |
Ensembl Acc Id: | ENSRNOP00000042493 ⟸ ENSRNOT00000047444 |
Ensembl Acc Id: | ENSRNOP00000076151 ⟸ ENSRNOT00000093675 |
Ensembl Acc Id: | ENSRNOP00000076217 ⟸ ENSRNOT00000093162 |
RefSeq Acc Id: | XP_038955734 ⟸ XM_039099806 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A1W2Q671 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038955733 ⟸ XM_039099805 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A1W2Q671 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001398747 ⟸ NM_001411818 |
- Peptide Label: | isoform 1 |
- UniProtKB: | A0A1W2Q671 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063136128 ⟸ XM_063280058 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_063136129 ⟸ XM_063280059 |
- Peptide Label: | isoform X6 |
- UniProtKB: | A0A0G2K2Y2 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A0A0G2K2Y2-F1-model_v2 | AlphaFold | A0A0G2K2Y2 | 1-1698 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13701766 | ||||||||
Promoter ID: | EPDNEW_R12289 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Wnk3_1 | ||||||||
Description: | WNK lysine deficient protein kinase 3 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1563131 | AgrOrtholog |
BioCyc Gene | G2FUF-2776 | BioCyc |
Ensembl Genes | ENSRNOG00000002537 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000047444 | ENTREZGENE |
ENSRNOT00000047444.4 | UniProtKB/TrEMBL | |
ENSRNOT00000082177 | ENTREZGENE | |
ENSRNOT00000082177.2 | UniProtKB/TrEMBL | |
ENSRNOT00000093675 | ENTREZGENE | |
ENSRNOT00000093675.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 | UniProtKB/TrEMBL |
Phosphorylase Kinase, domain 1 | UniProtKB/TrEMBL | |
Transferase(Phosphotransferase) domain 1 | UniProtKB/TrEMBL | |
InterPro | Kinase-like_dom | UniProtKB/TrEMBL |
Kinase_OSR1/WNK_CCT | UniProtKB/TrEMBL | |
Prot_kinase_cat_dom | UniProtKB/TrEMBL | |
Ser/Thr_kinase_AS | UniProtKB/TrEMBL | |
WNK_Ser-Thr_kinase | UniProtKB/TrEMBL | |
NCBI Gene | 317420 | ENTREZGENE |
PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | UniProtKB/TrEMBL |
Pfam | OSR1_C | UniProtKB/TrEMBL |
Pkinase | UniProtKB/TrEMBL | |
PhenoGen | Wnk3 | PhenoGen |
PROSITE | PROTEIN_KINASE_DOM | UniProtKB/TrEMBL |
PROTEIN_KINASE_ST | UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000002537 | RatGTEx |
SMART | S_TKc | UniProtKB/TrEMBL |
Superfamily-SCOP | Kinase_like | UniProtKB/TrEMBL |
UniProt | A0A0G2K2Y2 | ENTREZGENE, UniProtKB/TrEMBL |
A0A1W2Q671 | ENTREZGENE, UniProtKB/TrEMBL | |
A6KLA2 | ENTREZGENE, UniProtKB/TrEMBL | |
D4A7Z8 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2010-11-12 | Wnk3 | WNK lysine deficient protein kinase 3 | RGD1563131 | similar to Serine/threonine-protein kinase WNK3 (Protein kinase, lysine-deficient 3) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | RGD1563131 | similar to Serine/threonine-protein kinase WNK3 (Protein kinase, lysine-deficient 3) | RGD1563131_predicted | similar to Serine/threonine-protein kinase WNK3 (Protein kinase, lysine-deficient 3) (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2006-03-10 | RGD1563131_predicted | similar to Serine/threonine-protein kinase WNK3 (Protein kinase, lysine-deficient 3) (predicted) | similar to Serine/threonine-protein kinase WNK3 (Protein kinase with no lysine 3) (Protein kinase, lysine-deficient 3) (predicted) | Name updated | 1299863 | APPROVED | |
2006-03-07 | RGD1563131_predicted | similar to Serine/threonine-protein kinase WNK3 (Protein kinase with no lysine 3) (Protein kinase, lysine-deficient 3) (predicted) | LOC317420 | similar to Serine/threonine-protein kinase WNK3 (Protein kinase with no lysine 3) (Protein kinase, lysine-deficient 3) | Symbol and Name status set to approved | 1299863 | APPROVED |
2006-02-09 | LOC317420 | similar to Serine/threonine-protein kinase WNK3 (Protein kinase with no lysine 3) (Protein kinase, lysine-deficient 3) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |