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Gene: Slc48a1 (solute carrier family 48 member 1) Rattus norvegicus
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Symbol: Slc48a1
Name: solute carrier family 48 member 1
Description: Predicted to have heme binding activity and heme transporter activity. Predicted to be involved in heme transport. Predicted to localize to endosome membrane; lysosomal membrane; and plasma membrane. Orthologous to human SLC48A1 (solute carrier family 48 member 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: heme transporter HRG1; Heme-responsive gene 1 protein homolog; HRG-1; Hrg1; LOC300191; MGC125237; similar to RIKEN cDNA 4930570C03; solute carrier family 48 (heme transporter), member 1
Orthologs:
Homo sapiens (human) : SLC48A1 (solute carrier family 48 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slc48a1 (solute carrier family 48 (heme transporter), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc48a1 (solute carrier family 48 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC48A1 (solute carrier family 48 member 1)
Canis lupus familiaris (dog) : SLC48A1 (solute carrier family 48 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc48a1 (solute carrier family 48 member 1)
Sus scrofa (pig) : SLC48A1 (solute carrier family 48 member 1)
Chlorocebus sabaeus (African green monkey) : SLC48A1 (solute carrier family 48 member 1)
Heterocephalus glaber (naked mole-rat) : Slc48a1 (solute carrier family 48 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07139,271,698 - 139,279,499 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7139,271,698 - 139,279,499 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07139,463,280 - 139,471,081 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47136,492,421 - 136,500,222 (+)NCBIRGSC3.4rn4RGSC3.4
Celera7125,406,532 - 125,414,333 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc48a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562880
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.