Kif26b (kinesin family member 26B) - Rat Genome Database

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Gene: Kif26b (kinesin family member 26B) Rattus norvegicus
Analyze
Symbol: Kif26b
Name: kinesin family member 26B
RGD ID: 1560022
Description: Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to act upstream of or within establishment of cell polarity; positive regulation of cell-cell adhesion; and ureteric bud invasion. Predicted to be located in cytoskeleton. Orthologous to human KIF26B (kinesin family member 26B); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: kinesin-like protein KIF26B; LOC305012; LOC498294; RGD1560022; RGD1560572; similar to Hypothetical protein 4832420M10; similar to hypothetical protein D230039L06
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81392,815,427 - 93,221,071 (+)NCBIGRCr8
mRatBN7.21390,282,821 - 90,689,058 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1390,283,404 - 90,682,811 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1392,788,644 - 93,188,026 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01394,188,806 - 94,588,203 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01391,365,835 - 91,766,117 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01396,775,356 - 97,173,469 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1396,775,357 - 97,173,469 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013101,794,597 - 102,194,975 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41394,184,947 - 94,606,719 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1389,840,520 - 90,239,545 (+)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kif26bRatautosomal dominant cerebellar ataxia  ISOKIF26B (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal dominant cerebellar ataxiaClinVarPMID:29053796
Kif26bRatdevelopmental and epileptic encephalopathy 54  ISOKIF26B (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 54ClinVarPMID:25741868
Kif26bRatgastrointestinal stromal tumor  ISOKIF26B (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
Kif26bRatNeurodevelopmental Disorders  ISOKIF26B (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Kif26bRatparathyroid carcinoma  ISOKIF26B (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532

1 to 20 of 82 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kif26bRat1,2-dichloroethane increases expressionISOKif26b (Mus musculus)6480464ethylene dichloride results in increased expression of KIF26B mRNACTDPMID:28960355
Kif26bRat1,2-dimethylhydrazine multiple interactionsEXP 6480464[APC protein affects the susceptibility to 1 and 2-Dimethylhydrazine] which results in decreased expression of KIF26B mRNACTDPMID:27840820
Kif26bRat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOKif26b (Mus musculus)6480464[2 more ...CTDPMID:25510870
Kif26bRat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOKif26b (Mus musculus)6480464[2 more ...CTDPMID:25510870
Kif26bRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOKif26b (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of KIF26B mRNACTDPMID:19933214
Kif26bRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of KIF26B mRNACTDPMID:33387578
Kif26bRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOKif26b (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of KIF26B mRNACTDPMID:21570461
Kif26bRat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:32109520
Kif26bRat4,4'-sulfonyldiphenol increases expressionISOKif26b (Mus musculus)6480464bisphenol S results in increased expression of KIF26B mRNACTDPMID:30951980
Kif26bRat5-fluorouracil decreases expressionISOKIF26B (Homo sapiens)6480464Fluorouracil results in decreased expression of KIF26B mRNACTDPMID:34151400
Kif26bRatacrylamide decreases expressionISOKif26b (Mus musculus)6480464Acrylamide results in decreased expression of KIF26B mRNACTDPMID:30807115
Kif26bRataflatoxin B1 increases methylationISOKIF26B (Homo sapiens)6480464Aflatoxin B1 results in increased methylation of KIF26B intronCTDPMID:30157460
Kif26bRataflatoxin B1 decreases expressionISOKIF26B (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of KIF26B mRNACTDPMID:32234424
Kif26bRatAflatoxin B2 alpha increases methylationISOKIF26B (Homo sapiens)6480464aflatoxin B2 results in increased methylation of KIF26B intronCTDPMID:30157460
Kif26bRataristolochic acid A decreases expressionISOKIF26B (Homo sapiens)6480464aristolochic acid I results in decreased expression of KIF26B mRNACTDPMID:33212167
Kif26bRatarsane affects methylationISOKIF26B (Homo sapiens)6480464Arsenic affects the methylation of KIF26B geneCTDPMID:25304211
Kif26bRatarsenic atom affects methylationISOKIF26B (Homo sapiens)6480464Arsenic affects the methylation of KIF26B geneCTDPMID:25304211
Kif26bRatbenzo[a]pyrene affects methylationISOKIF26B (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of KIF26B intronCTDPMID:30157460
Kif26bRatbenzo[a]pyrene increases methylationISOKIF26B (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of KIF26B exon and Benzo(a)pyrene results in increased methylation of KIF26B promoterCTDPMID:27901495
Kif26bRatbenzo[a]pyrene multiple interactionsISOKif26b (Mus musculus)6480464[Benzo(a)pyrene co-treated with benz(a)anthracene co-treated with benzo(b)fluoranthene co-treated with chrysene] results in decreased expression of KIF26B mRNACTDPMID:27858113

1 to 20 of 82 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kif26bRatestablishment of cell polarity acts_upstream_of_or_withinISOKif26b (Mus musculus)1624291MGI:4459557 PMID:20439720RGDPMID:20439720
Kif26bRatestablishment of cell polarity acts_upstream_of_or_withinIEAUniProtKB:Q7TNC6 and ensembl:ENSMUSP000001244621600115GO_REF:0000107EnsemblGO_REF:0000107
Kif26bRatmicrotubule-based movement involved_inIEAInterPro:IPR001752 and InterPro:IPR0276401600115GO_REF:0000002InterProGO_REF:0000002
Kif26bRatpositive regulation of cell-cell adhesion acts_upstream_of_or_withinIEAUniProtKB:Q7TNC6 and ensembl:ENSMUSP000001244621600115GO_REF:0000107EnsemblGO_REF:0000107
Kif26bRatpositive regulation of cell-cell adhesion acts_upstream_of_or_withinISOKif26b (Mus musculus)1624291MGI:1930780 more ...RGDPMID:20439720
Kif26bRatureteric bud invasion acts_upstream_of_or_withinIEAUniProtKB:Q7TNC6 and ensembl:ENSMUSP000001244621600115GO_REF:0000107EnsemblGO_REF:0000107
Kif26bRatureteric bud invasion acts_upstream_of_or_withinISOKif26b (Mus musculus)1624291MGI:4459557 PMID:20439720RGDPMID:20439720

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kif26bRatcytoskeleton located_inIEAUniProtKB-SubCell:SL-00901600115GO_REF:0000044UniProtGO_REF:0000044
Kif26bRatcytoskeleton located_inIEAUniProtKB-KW:KW-02061600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kif26bRatATP binding enablesIEAUniRule:UR0004010071600115GO_REF:0000104UniProtGO_REF:0000104
Kif26bRatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Kif26bRatATP binding enablesIEAInterPro:IPR0017521600115GO_REF:0000002InterProGO_REF:0000002
Kif26bRatcytoskeletal motor activity enablesIEAUniRule:UR0004010071600115GO_REF:0000104UniProtGO_REF:0000104
Kif26bRatmicrotubule binding enablesIEAInterPro:IPR0017521600115GO_REF:0000002InterProGO_REF:0000002
Kif26bRatmicrotubule motor activity enablesIEAInterPro:IPR001752 and InterPro:IPR0276401600115GO_REF:0000002InterProGO_REF:0000002
Kif26bRatnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Kif26bRatnucleotide binding enablesIEAUniRule:UR0004010071600115GO_REF:0000104UniProtGO_REF:0000104
Kif26bRatprotein binding enablesISOKif26b (Mus musculus)1624291PR:P46935 more ...RGDPMID:20439720 and PMID:22737231
1 to 9 of 9 rows


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:14727108   PMID:15632090   PMID:20439720  



Kif26b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81392,815,427 - 93,221,071 (+)NCBIGRCr8
mRatBN7.21390,282,821 - 90,689,058 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1390,283,404 - 90,682,811 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1392,788,644 - 93,188,026 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01394,188,806 - 94,588,203 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01391,365,835 - 91,766,117 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01396,775,356 - 97,173,469 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1396,775,357 - 97,173,469 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013101,794,597 - 102,194,975 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41394,184,947 - 94,606,719 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1389,840,520 - 90,239,545 (+)NCBICelera
Cytogenetic Map13q26NCBI
KIF26B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381245,154,985 - 245,709,432 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1245,154,985 - 245,709,432 (+)EnsemblGRCh38hg38GRCh38
GRCh371245,318,287 - 245,872,734 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361243,384,910 - 243,933,051 (+)NCBINCBI36Build 36hg18NCBI36
Celera1218,607,159 - 219,157,882 (+)NCBICelera
Cytogenetic Map1q44NCBI
HuRef1215,701,421 - 216,254,032 (+)NCBIHuRef
CHM1_11246,590,595 - 247,138,523 (+)NCBICHM1_1
T2T-CHM13v2.01244,572,450 - 245,130,184 (+)NCBIT2T-CHM13v2.0
Kif26b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,356,690 - 178,766,765 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1178,356,690 - 178,766,765 (+)EnsemblGRCm39 Ensembl
GRCm381178,529,125 - 178,932,857 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,529,125 - 178,939,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv371180,459,256 - 180,862,988 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361180,701,650 - 180,769,527 (+)NCBIMGSCv36mm8
Celera1185,591,356 - 185,992,064 (+)NCBICelera
Cytogenetic Map1H4NCBI
cM Map183.16NCBI
Kif26b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554068,290,046 - 8,731,226 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554068,289,774 - 8,738,131 (+)NCBIChiLan1.0ChiLan1.0
KIF26B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213,433,092 - 3,993,275 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113,656,595 - 4,216,868 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01220,756,171 - 221,321,969 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11226,343,827 - 226,688,452 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1226,343,821 - 226,681,669 (+)Ensemblpanpan1.1panPan2
KIF26B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1736,087,483 - 36,529,334 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl736,088,050 - 36,522,653 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha735,561,234 - 36,005,056 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0735,918,281 - 36,360,127 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl735,918,424 - 36,354,046 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1735,752,326 - 36,195,843 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0735,767,424 - 36,209,134 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0736,033,218 - 36,477,290 (+)NCBIUU_Cfam_GSD_1.0
Kif26b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934449,015,099 - 49,499,220 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365265,255,227 - 5,434,697 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365265,250,154 - 5,434,699 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF26B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1018,081,754 - 18,219,848 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11017,708,365 - 18,220,052 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21020,383,677 - 20,762,886 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIF26B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12582,177,587 - 82,735,055 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2582,631,337 - 82,734,410 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605584,409,130 - 84,992,517 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kif26b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477113,974,912 - 14,495,991 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477113,972,394 - 14,496,647 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Kif26b
2191 total Variants

Predicted Target Of
Summary Value
Count of predictions:212
Count of miRNA genes:149
Interacting mature miRNAs:171
Transcripts:ENSRNOT00000017784
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1366451204106807694Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat

1 to 10 of 16 rows
D13Rat54  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81393,135,505 - 93,135,614 (+)Marker Load Pipeline
Rnor_5.013101,878,983 - 101,879,092NCBIRnor5.0
Rnor_5.013101,878,982 - 101,879,093NCBIRnor5.0
RGSC_v3.41394,524,904 - 94,525,014RGDRGSC3.4
RGSC_v3.41394,524,905 - 94,525,013UniSTSRGSC3.4
RGSC_v3.11394,713,840 - 94,713,950RGD
Celera1390,160,324 - 90,160,432UniSTS
RH 3.4 Map13611.0RGD
RH 3.4 Map13611.0UniSTS
RH 2.0 Map13658.3RGD
FHH x ACI Map1346.13RGD
Cytogenetic Map13q26UniSTS
D13Mco16  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81393,094,196 - 93,094,392 (+)Marker Load Pipeline
mRatBN7.21390,562,204 - 90,562,400 (-)MAPPERmRatBN7.2
Rnor_6.01396,895,515 - 96,895,710NCBIRnor6.0
Rnor_5.013101,919,119 - 101,919,314UniSTSRnor5.0
RGSC_v3.41394,483,926 - 94,484,122RGDRGSC3.4
RGSC_v3.41394,483,927 - 94,484,122UniSTSRGSC3.4
RGSC_v3.11394,672,862 - 94,673,058RGD
Celera1390,118,817 - 90,119,012UniSTS
Cytogenetic Map13q26UniSTS
BE099345  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,449,542 - 90,449,740 (-)MAPPERmRatBN7.2
Rnor_6.01397,007,633 - 97,007,830NCBIRnor6.0
Rnor_5.013102,029,855 - 102,030,052UniSTSRnor5.0
RGSC_v3.41394,354,956 - 94,355,153UniSTSRGSC3.4
Celera1390,006,495 - 90,006,692UniSTS
RH 3.4 Map13610.9UniSTS
Cytogenetic Map13q26UniSTS
BF403417  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,348,063 - 90,348,224 (-)MAPPERmRatBN7.2
Rnor_6.01397,109,179 - 97,109,339NCBIRnor6.0
Rnor_5.013102,131,114 - 102,131,274UniSTSRnor5.0
RGSC_v3.41394,251,051 - 94,251,211UniSTSRGSC3.4
Celera1389,905,100 - 89,905,260UniSTS
RH 3.4 Map13612.6UniSTS
Cytogenetic Map13q26UniSTS
AU048808  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,322,013 - 90,322,178 (-)MAPPERmRatBN7.2
Rnor_6.01397,135,207 - 97,135,371NCBIRnor6.0
Rnor_5.013102,157,142 - 102,157,306UniSTSRnor5.0
RGSC_v3.41394,224,933 - 94,225,097UniSTSRGSC3.4
Celera1389,879,147 - 89,879,301UniSTS
Cytogenetic Map13q26UniSTS
AU049220  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,675,850 - 90,675,984 (-)MAPPERmRatBN7.2
Rnor_6.01396,782,184 - 96,782,317NCBIRnor6.0
Rnor_5.013101,807,670 - 101,807,803UniSTSRnor5.0
RGSC_v3.41394,599,758 - 94,599,891UniSTSRGSC3.4
Celera1390,232,584 - 90,232,717UniSTS
Cytogenetic Map13q26UniSTS
ha2905  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,481,858 - 90,482,630 (-)MAPPERmRatBN7.2
Rnor_6.01396,974,679 - 96,975,450NCBIRnor6.0
Rnor_5.013101,997,340 - 101,998,111UniSTSRnor5.0
Cytogenetic Map13q26UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 46 113 89 88 57 20 57 6 208 89 93 45 60 31



Ensembl Acc Id: ENSRNOT00000017784   ⟹   ENSRNOP00000017784
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1390,283,404 - 90,682,811 (+)Ensembl
Rnor_6.0 Ensembl1396,775,357 - 97,173,469 (-)Ensembl
RefSeq Acc Id: NM_001109079   ⟹   NP_001102549
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81392,815,427 - 93,214,826 (+)NCBI
mRatBN7.21390,283,404 - 90,682,812 (+)NCBI
Rnor_6.01396,775,356 - 97,173,469 (-)NCBI
Rnor_5.013101,794,597 - 102,194,975 (-)NCBI
RGSC_v3.41394,184,947 - 94,606,719 (+)RGD
Celera1389,840,520 - 90,239,545 (+)RGD
Sequence:
RefSeq Acc Id: XM_039090818   ⟹   XP_038946746
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81393,079,430 - 93,221,071 (+)NCBI
mRatBN7.21390,547,426 - 90,689,058 (+)NCBI
RefSeq Acc Id: XM_063272386   ⟹   XP_063128456
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81393,021,536 - 93,221,071 (+)NCBI
RefSeq Acc Id: XM_063272387   ⟹   XP_063128457
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81393,037,257 - 93,221,071 (+)NCBI
RefSeq Acc Id: XM_063272388   ⟹   XP_063128458
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81393,040,226 - 93,221,071 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_001102549 (Get FASTA)   NCBI Sequence Viewer  
  XP_038946746 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128456 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128457 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128458 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL94806 (Get FASTA)   NCBI Sequence Viewer  
  EDL94807 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000017784
  ENSRNOP00000017784.6
1 to 9 of 9 rows
RefSeq Acc Id: NP_001102549   ⟸   NM_001109079
- UniProtKB: D4ADC4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000017784   ⟸   ENSRNOT00000017784
RefSeq Acc Id: XP_038946746   ⟸   XM_039090818
- Peptide Label: isoform X3
- UniProtKB: A6JGF1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128456   ⟸   XM_063272386
- Peptide Label: isoform X1
- UniProtKB: A6JGF1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128457   ⟸   XM_063272387
- Peptide Label: isoform X2
- UniProtKB: A6JGF1 (UniProtKB/TrEMBL)
Kinesin motor

Name Modeler Protein Id AA Range Protein Structure
AF-D4ADC4-F1-model_v2 AlphaFold D4ADC4 1-2118 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699051
Promoter ID:EPDNEW_R9576
Type:single initiation site
Name:Kif26b_1
Description:kinesin family member 26B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01397,173,469 - 97,173,529EPDNEW


1 to 22 of 22 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-17169 BioCyc
Ensembl Genes ENSRNOG00000028624 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000017784 ENTREZGENE
  ENSRNOT00000017784.7 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report rno:305012 UniProtKB/TrEMBL
NCBI Gene 305012 ENTREZGENE
PANTHER KINESIN-LIKE PROTEIN KIF26B UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
PhenoGen Kif26b PhenoGen
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_DOMAIN2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000028624 RatGTEx
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A6JGF1 ENTREZGENE, UniProtKB/TrEMBL
  D4ADC4 ENTREZGENE, UniProtKB/TrEMBL
1 to 22 of 22 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2009-06-15 Kif26b  kinesin family member 26B  RGD1560572  similar to hypothetical protein D230039L06   Data merged from RGD:1560572 1643240 APPROVED
2009-06-08 Kif26b  kinesin family member 26B  RGD1560572  similar to hypothetical protein D230039L06   Data merged from RGD:1560572 737654 APPROVED
2008-09-16 Kif26b  kinesin family member 26B  RGD1560022  similar to Hypothetical protein 4832420M10   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560022  similar to Hypothetical protein 4832420M10   RGD1560022_predicted  similar to Hypothetical protein 4832420M10 (predicted)  'predicted' is removed 2292626 APPROVED
2008-04-30 RGD1560572  similar to hypothetical protein D230039L06   RGD1560572_predicted  similar to hypothetical protein D230039L06 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560022_predicted  similar to Hypothetical protein 4832420M10 (predicted)  LOC305012  similar to Hypothetical protein 4832420M10  Symbol and Name status set to approved 1299863 APPROVED
2006-03-07 RGD1560572_predicted  similar to hypothetical protein D230039L06 (predicted)  LOC498294  similar to hypothetical protein D230039L06  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498294  similar to hypothetical protein D230039L06      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-02-09 LOC305012  similar to Hypothetical protein 4832420M10      Symbol and Name status set to provisional 70820 PROVISIONAL