Kif26b (kinesin family member 26B) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Kif26b (kinesin family member 26B) Rattus norvegicus
Analyze
Symbol: Kif26b
Name: kinesin family member 26B
RGD ID: 1560022
Description: Predicted to enable microtubule binding activity. Predicted to act upstream of or within establishment of cell polarity; positive regulation of cell-cell adhesion; and ureteric bud invasion. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Orthologous to human KIF26B (kinesin family member 26B); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: kinesin-like protein KIF26B; LOC305012; LOC498294; RGD1560022; RGD1560572; similar to Hypothetical protein 4832420M10; similar to hypothetical protein D230039L06
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21390,282,821 - 90,689,058 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1390,283,404 - 90,682,811 (+)Ensembl
Rnor_6.01396,775,356 - 97,173,469 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1396,775,357 - 97,173,469 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013101,794,597 - 102,194,975 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41394,184,947 - 94,606,719 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1389,840,520 - 90,239,545 (+)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:14727108   PMID:15632090   PMID:20439720  


Genomics

Comparative Map Data
Kif26b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21390,282,821 - 90,689,058 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1390,283,404 - 90,682,811 (+)Ensembl
Rnor_6.01396,775,356 - 97,173,469 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1396,775,357 - 97,173,469 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013101,794,597 - 102,194,975 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41394,184,947 - 94,606,719 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1389,840,520 - 90,239,545 (+)NCBICelera
Cytogenetic Map13q26NCBI
KIF26B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381245,154,985 - 245,709,432 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1245,154,985 - 245,709,432 (+)EnsemblGRCh38hg38GRCh38
GRCh371245,318,287 - 245,872,734 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361243,384,910 - 243,933,051 (+)NCBINCBI36hg18NCBI36
Celera1218,607,159 - 219,157,882 (+)NCBI
Cytogenetic Map1q44NCBI
HuRef1215,701,421 - 216,254,032 (+)NCBIHuRef
CHM1_11246,590,595 - 247,138,523 (+)NCBICHM1_1
T2T-CHM13v2.01244,572,450 - 245,130,184 (+)NCBI
Kif26b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,356,690 - 178,766,765 (+)NCBIGRCm39mm39
GRCm39 Ensembl1178,356,690 - 178,766,765 (+)Ensembl
GRCm381178,529,125 - 178,932,857 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,529,125 - 178,939,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv371180,459,256 - 180,862,988 (+)NCBIGRCm37mm9NCBIm37
MGSCv361180,701,650 - 180,769,527 (+)NCBImm8
Celera1185,591,356 - 185,992,064 (+)NCBICelera
Cytogenetic Map1H4NCBI
cM Map183.16NCBI
Kif26b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554068,290,046 - 8,731,226 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554068,289,774 - 8,738,131 (+)NCBIChiLan1.0ChiLan1.0
KIF26B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11226,343,827 - 226,688,452 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1226,343,821 - 226,681,669 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01220,756,171 - 221,321,969 (+)NCBIMhudiblu_PPA_v0panPan3
KIF26B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1736,087,483 - 36,529,334 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl736,088,050 - 36,522,653 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha735,561,234 - 36,005,056 (+)NCBI
ROS_Cfam_1.0735,918,281 - 36,360,127 (+)NCBI
ROS_Cfam_1.0 Ensembl735,918,424 - 36,354,046 (+)Ensembl
UMICH_Zoey_3.1735,752,326 - 36,195,843 (+)NCBI
UNSW_CanFamBas_1.0735,767,424 - 36,209,134 (+)NCBI
UU_Cfam_GSD_1.0736,033,218 - 36,477,290 (+)NCBI
Kif26b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934449,015,099 - 49,499,220 (+)NCBI
SpeTri2.0NW_0049365265,250,154 - 5,434,699 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF26B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1017,711,443 - 18,219,870 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11017,708,365 - 18,220,052 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21020,383,677 - 20,762,886 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIF26B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12582,177,587 - 82,735,055 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2582,631,337 - 82,734,410 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605584,409,130 - 84,992,517 (+)NCBIVero_WHO_p1.0
Kif26b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477113,974,912 - 14,495,991 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462477113,972,394 - 14,496,647 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
D13Rat54  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.013101,878,982 - 101,879,093NCBIRnor5.0
Rnor_5.013101,878,983 - 101,879,092NCBIRnor5.0
RGSC_v3.41394,524,905 - 94,525,013UniSTSRGSC3.4
RGSC_v3.41394,524,904 - 94,525,014RGDRGSC3.4
RGSC_v3.11394,713,840 - 94,713,950RGD
Celera1390,160,324 - 90,160,432UniSTS
RH 3.4 Map13611.0RGD
RH 3.4 Map13611.0UniSTS
RH 2.0 Map13658.3RGD
FHH x ACI Map1346.13RGD
Cytogenetic Map13q26UniSTS
D13Mco16  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,562,204 - 90,562,400 (-)MAPPERmRatBN7.2
Rnor_6.01396,895,515 - 96,895,710NCBIRnor6.0
Rnor_5.013101,919,119 - 101,919,314UniSTSRnor5.0
RGSC_v3.41394,483,926 - 94,484,122RGDRGSC3.4
RGSC_v3.41394,483,927 - 94,484,122UniSTSRGSC3.4
RGSC_v3.11394,672,862 - 94,673,058RGD
Celera1390,118,817 - 90,119,012UniSTS
Cytogenetic Map13q26UniSTS
BE099345  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,449,542 - 90,449,740 (-)MAPPERmRatBN7.2
Rnor_6.01397,007,633 - 97,007,830NCBIRnor6.0
Rnor_5.013102,029,855 - 102,030,052UniSTSRnor5.0
RGSC_v3.41394,354,956 - 94,355,153UniSTSRGSC3.4
Celera1390,006,495 - 90,006,692UniSTS
RH 3.4 Map13610.9UniSTS
Cytogenetic Map13q26UniSTS
BF403417  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,348,063 - 90,348,224 (-)MAPPERmRatBN7.2
Rnor_6.01397,109,179 - 97,109,339NCBIRnor6.0
Rnor_5.013102,131,114 - 102,131,274UniSTSRnor5.0
RGSC_v3.41394,251,051 - 94,251,211UniSTSRGSC3.4
Celera1389,905,100 - 89,905,260UniSTS
RH 3.4 Map13612.6UniSTS
Cytogenetic Map13q26UniSTS
AU048808  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,322,013 - 90,322,178 (-)MAPPERmRatBN7.2
Rnor_6.01397,135,207 - 97,135,371NCBIRnor6.0
Rnor_5.013102,157,142 - 102,157,306UniSTSRnor5.0
RGSC_v3.41394,224,933 - 94,225,097UniSTSRGSC3.4
Celera1389,879,147 - 89,879,301UniSTS
Cytogenetic Map13q26UniSTS
AU049220  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,675,850 - 90,675,984 (-)MAPPERmRatBN7.2
Rnor_6.01396,782,184 - 96,782,317NCBIRnor6.0
Rnor_5.013101,807,670 - 101,807,803UniSTSRnor5.0
RGSC_v3.41394,599,758 - 94,599,891UniSTSRGSC3.4
Celera1390,232,584 - 90,232,717UniSTS
Cytogenetic Map13q26UniSTS
ha2905  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21390,481,858 - 90,482,630 (-)MAPPERmRatBN7.2
Rnor_6.01396,974,679 - 96,975,450NCBIRnor6.0
Rnor_5.013101,997,340 - 101,998,111UniSTSRnor5.0
Cytogenetic Map13q26UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
8655959Pur32Proteinuria QTL 328.4total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:212
Count of miRNA genes:149
Interacting mature miRNAs:171
Transcripts:ENSRNOT00000017784
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 24 2 2 2 35 16 12 5
Low 2 6 17 9 9 1 1 39 19 27 6 1
Below cutoff 1 11 36 28 14 28 7 10 2 7

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000017784   ⟹   ENSRNOP00000017784
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1390,283,404 - 90,682,811 (+)Ensembl
Rnor_6.0 Ensembl1396,775,357 - 97,173,469 (-)Ensembl
RefSeq Acc Id: NM_001109079   ⟹   NP_001102549
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21390,283,404 - 90,682,812 (+)NCBI
Rnor_6.01396,775,356 - 97,173,469 (-)NCBI
Rnor_5.013101,794,597 - 102,194,975 (-)NCBI
RGSC_v3.41394,184,947 - 94,606,719 (+)RGD
Celera1389,840,520 - 90,239,545 (+)RGD
Sequence:
RefSeq Acc Id: XM_039090817   ⟹   XP_038946745
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21390,282,821 - 90,689,058 (+)NCBI
RefSeq Acc Id: XM_039090818   ⟹   XP_038946746
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21390,547,426 - 90,689,058 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001102549 (Get FASTA)   NCBI Sequence Viewer  
  XP_038946745 (Get FASTA)   NCBI Sequence Viewer  
  XP_038946746 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL94806 (Get FASTA)   NCBI Sequence Viewer  
  EDL94807 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001102549   ⟸   NM_001109079
- UniProtKB: D4ADC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000017784   ⟸   ENSRNOT00000017784
RefSeq Acc Id: XP_038946745   ⟸   XM_039090817
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038946746   ⟸   XM_039090818
- Peptide Label: isoform X2
Protein Domains
Kinesin motor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ADC4-F1-model_v2 AlphaFold D4ADC4 1-2118 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699051
Promoter ID:EPDNEW_R9576
Type:single initiation site
Name:Kif26b_1
Description:kinesin family member 26B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01397,173,469 - 97,173,529EPDNEW

Strain Variation

Strain Sequence Variants (MRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560022 AgrOrtholog
BioCyc Gene G2FUF-17169 BioCyc
Ensembl Genes ENSRNOG00000028624 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000017784 ENTREZGENE
  ENSRNOP00000017784.6 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000017784 ENTREZGENE
  ENSRNOT00000017784.7 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report rno:305012 UniProtKB/TrEMBL
NCBI Gene 305012 ENTREZGENE
PANTHER PTHR24115 UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
PhenoGen Kif26b PhenoGen
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_DOMAIN2 UniProtKB/TrEMBL
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt D4ADC4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2009-06-15 Kif26b  kinesin family member 26B  RGD1560572  similar to hypothetical protein D230039L06   Data Merged 1643240 APPROVED
2009-06-08 Kif26b  kinesin family member 26B  RGD1560572  similar to hypothetical protein D230039L06   Data Merged 737654 APPROVED
2008-09-16 Kif26b  kinesin family member 26B  RGD1560022  similar to Hypothetical protein 4832420M10   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560022  similar to Hypothetical protein 4832420M10   RGD1560022_predicted  similar to Hypothetical protein 4832420M10 (predicted)  'predicted' is removed 2292626 APPROVED
2008-04-30 RGD1560572  similar to hypothetical protein D230039L06   RGD1560572_predicted  similar to hypothetical protein D230039L06 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560022_predicted  similar to Hypothetical protein 4832420M10 (predicted)  LOC305012  similar to Hypothetical protein 4832420M10  Symbol and Name status set to approved 1299863 APPROVED
2006-03-07 RGD1560572_predicted  similar to hypothetical protein D230039L06 (predicted)  LOC498294  similar to hypothetical protein D230039L06  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498294  similar to hypothetical protein D230039L06      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-02-09 LOC305012  similar to Hypothetical protein 4832420M10      Symbol and Name status set to provisional 70820 PROVISIONAL