Symbol:
Cenpa
Name:
centromere protein A
RGD ID:
1558182
MGI Page
MGI
Description:
Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Acts upstream of or within protein localization to chromosome, centromeric region. Located in CENP-A containing chromatin; condensed chromosome, centromeric region; and pericentric heterochromatin. Is expressed in 2-cell stage embryo; cerebral cortex ventricular layer; epiblast; germ cell of gonad; and nephrogenic zone. Human ortholog(s) of this gene implicated in autoimmune disease. Orthologous to human CENPA (centromere protein A).
Type:
protein-coding
RefSeq Status:
REVIEWED
Previously known as:
Cen; Cenp-A; centromere autoantigen A; centrosomin A; histone H3-like centromeric protein A
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
CENPA (centromere protein A) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
CENPA (centromere protein A)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Rattus norvegicus (Norway rat):
Cenpa (centromere protein A)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
cid
Alliance
DIOPT (PANTHER|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):
cenpa
Alliance
DIOPT (Hieranoid|OMA|OrthoFinder|PANTHER|PhylomeDB)
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 30,824,214 - 30,832,181 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 30,824,121 - 30,832,174 (+) Ensembl GRCm39 Ensembl GRCm38 5 30,666,877 - 30,674,837 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 30,666,777 - 30,674,830 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 30,969,275 - 30,977,199 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 30,943,483 - 30,951,407 (+) NCBI MGSCv36 mm8 Celera 5 28,145,648 - 28,153,572 (+) NCBI Celera Cytogenetic Map 5 B1 NCBI cM Map 5 16.76 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Cenpa Mouse (-)-epigallocatechin 3-gallate multiple interactions ISO CENPA (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of CENPA mRNA CTD PMID:22079256 Cenpa Mouse 1,1-dichloroethene increases expression EXP 6480464 vinylidene chloride results in increased expression of CENPA mRNA CTD PMID:26682919 Cenpa Mouse 1,2-dichloroethane decreases expression EXP 6480464 ethylene dichloride results in decreased expression of CENPA mRNA CTD PMID:28189721 and PMID:28960355 Cenpa Mouse 1,2-dimethylhydrazine decreases expression ISO Cenpa (Rattus norvegicus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of CENPA mRNA CTD PMID:27840820 Cenpa Mouse 1-naphthyl isothiocyanate increases expression ISO Cenpa (Rattus norvegicus) 6480464 1-Naphthylisothiocyanate results in increased expression of CENPA mRNA CTD PMID:30723492 Cenpa Mouse 17alpha-ethynylestradiol increases expression EXP 6480464 Ethinyl Estradiol results in increased expression of CENPA mRNA CTD PMID:17942748 Cenpa Mouse 17alpha-ethynylestradiol multiple interactions EXP 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CENPA mRNA CTD PMID:17942748 Cenpa Mouse 17beta-estradiol increases expression EXP 6480464 Estradiol results in increased expression of CENPA mRNA CTD PMID:25210133 Cenpa Mouse 17beta-estradiol multiple interactions ISO Cenpa (Rattus norvegicus) 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CENPA mRNA CTD PMID:32741896 Cenpa Mouse 17beta-estradiol increases expression ISO Cenpa (Rattus norvegicus) 6480464 Estradiol results in increased expression of CENPA mRNA CTD PMID:32145629 Cenpa Mouse 17beta-estradiol multiple interactions ISO CENPA (Homo sapiens) 6480464 Fulvestrant inhibits the reaction [Estradiol results in increased expression of CENPA mRNA] CTD PMID:31646340 Cenpa Mouse 17beta-estradiol increases expression ISO CENPA (Homo sapiens) 6480464 Estradiol results in increased expression of CENPA mRNA CTD PMID:16474171 more ... Cenpa Mouse 17beta-estradiol multiple interactions EXP 6480464 ESR1 protein promotes the reaction [Estradiol results in increased expression of CENPA mRNA] CTD PMID:25210133 Cenpa Mouse 17beta-estradiol 3-benzoate multiple interactions ISO Cenpa (Rattus norvegicus) 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CENPA mRNA CTD PMID:32741896 Cenpa Mouse 2,3,7,8-tetrachlorodibenzodioxine multiple interactions EXP 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CENPA mRNA CTD PMID:17942748 Cenpa Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Cenpa (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of CENPA mRNA CTD PMID:33387578 and PMID:34747641 Cenpa Mouse 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of CENPA mRNA CTD PMID:37172768 Cenpa Mouse 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of CENPA mRNA CTD PMID:21570461 Cenpa Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO CENPA (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in decreased expression of CENPA mRNA CTD PMID:21802500 Cenpa Mouse 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression EXP 6480464 2 more ... CTD PMID:38648751 Cenpa Mouse 2-methylcholine affects expression ISO CENPA (Homo sapiens) 6480464 beta-methylcholine affects the expression of CENPA mRNA CTD PMID:21179406 Cenpa Mouse 2-palmitoylglycerol increases expression ISO CENPA (Homo sapiens) 6480464 2-palmitoylglycerol results in increased expression of CENPA mRNA CTD PMID:37199045 Cenpa Mouse 3,3',4,4'-tetrachlorobiphenyl multiple interactions EXP 6480464 3 more ... CTD PMID:19467301 Cenpa Mouse 3-isobutyl-1-methyl-7H-xanthine multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Mouse 3-methylcholanthrene increases expression EXP 6480464 Methylcholanthrene results in increased expression of CENPA mRNA CTD PMID:20713471 Cenpa Mouse 4,4'-sulfonyldiphenol multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Mouse 4-hydroxynon-2-enal decreases expression EXP 6480464 4-hydroxy-2-nonenal results in decreased expression of CENPA mRNA CTD PMID:19191707 Cenpa Mouse 4-hydroxyphenyl retinamide increases expression EXP 6480464 Fenretinide results in increased expression of CENPA mRNA CTD PMID:28973697 Cenpa Mouse 5-azacytidine multiple interactions ISO CENPA (Homo sapiens) 6480464 [Azacitidine co-treated with Thalidomide] affects the expression of CENPA mRNA CTD PMID:18720364 Cenpa Mouse 6-propyl-2-thiouracil increases expression ISO Cenpa (Rattus norvegicus) 6480464 Propylthiouracil results in increased expression of CENPA mRNA CTD PMID:24780913 and PMID:30047161 Cenpa Mouse acetamide increases expression ISO Cenpa (Rattus norvegicus) 6480464 acetamide results in increased expression of CENPA mRNA CTD PMID:31881176 Cenpa Mouse acrylamide increases expression ISO Cenpa (Rattus norvegicus) 6480464 Acrylamide results in increased expression of CENPA mRNA CTD PMID:28959563 Cenpa Mouse afimoxifene decreases expression ISO CENPA (Homo sapiens) 6480464 afimoxifene results in decreased expression of CENPA mRNA CTD PMID:16514628 Cenpa Mouse aflatoxin B1 affects expression ISO CENPA (Homo sapiens) 6480464 Aflatoxin B1 affects the expression of CENPA protein CTD PMID:20106945 Cenpa Mouse aflatoxin B1 decreases expression ISO CENPA (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of CENPA mRNA CTD PMID:32234424 Cenpa Mouse aflatoxin B1 increases expression ISO Cenpa (Rattus norvegicus) 6480464 Aflatoxin B1 results in increased expression of CENPA mRNA CTD PMID:23630614 Cenpa Mouse aflatoxin B1 decreases expression EXP 6480464 Aflatoxin B1 results in decreased expression of CENPA mRNA CTD PMID:19770486 Cenpa Mouse all-trans-retinoic acid decreases expression ISO CENPA (Homo sapiens) 6480464 Tretinoin results in decreased expression of CENPA mRNA CTD PMID:33167477 Cenpa Mouse amitrole increases expression ISO Cenpa (Rattus norvegicus) 6480464 Amitrole results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Mouse arsenite(3-) decreases expression EXP 6480464 arsenite results in decreased expression of CENPA mRNA CTD PMID:18929588 Cenpa Mouse arsenite(3-) multiple interactions ISO CENPA (Homo sapiens) 6480464 arsenite promotes the reaction [G3BP1 protein binds to CENPA mRNA] CTD PMID:32406909 Cenpa Mouse arsenite(3-) decreases expression ISO CENPA (Homo sapiens) 6480464 arsenite results in decreased expression of CENPA mRNA CTD PMID:31646340 Cenpa Mouse azathioprine decreases expression ISO CENPA (Homo sapiens) 6480464 Azathioprine results in decreased expression of CENPA mRNA CTD PMID:22623647 Cenpa Mouse benzo[a]pyrene decreases expression EXP 6480464 Benzo(a)pyrene results in decreased expression of CENPA protein CTD PMID:29145655 Cenpa Mouse benzo[a]pyrene decreases methylation EXP 6480464 Benzo(a)pyrene results in decreased methylation of CENPA promoter CTD PMID:27901495 Cenpa Mouse benzo[a]pyrene decreases methylation ISO CENPA (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased methylation of CENPA promoter CTD PMID:27901495 Cenpa Mouse benzo[a]pyrene decreases expression ISO CENPA (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of CENPA mRNA CTD PMID:20064835 more ... Cenpa Mouse benzo[a]pyrene diol epoxide I decreases expression ISO CENPA (Homo sapiens) 6480464 7 more ... CTD PMID:19150397 more ... Cenpa Mouse benzo[b]fluoranthene increases expression EXP 6480464 benzo(b)fluoranthene results in increased expression of CENPA mRNA CTD PMID:26377693 Cenpa Mouse bis(2-chloroethyl) sulfide decreases expression ISO CENPA (Homo sapiens) 6480464 Mustard Gas results in decreased expression of CENPA mRNA CTD PMID:25102026 Cenpa Mouse bisphenol A increases expression ISO CENPA (Homo sapiens) 6480464 bisphenol A results in increased expression of CENPA mRNA CTD PMID:16474171 Cenpa Mouse bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of CENPA mRNA CTD PMID:33221593 Cenpa Mouse bisphenol A increases expression ISO Cenpa (Rattus norvegicus) 6480464 bisphenol A results in increased expression of CENPA mRNA CTD PMID:32145629 Cenpa Mouse bisphenol A decreases expression ISO CENPA (Homo sapiens) 6480464 bisphenol A results in decreased expression of CENPA mRNA CTD PMID:29275510 Cenpa Mouse bisphenol A increases methylation ISO Cenpa (Rattus norvegicus) 6480464 bisphenol A results in increased methylation of CENPA gene CTD PMID:28505145 Cenpa Mouse bisphenol A decreases expression ISO Cenpa (Rattus norvegicus) 6480464 bisphenol A results in decreased expression of CENPA mRNA CTD PMID:25181051 and PMID:34947998 Cenpa Mouse bisphenol F decreases expression EXP 6480464 bisphenol F results in decreased expression of CENPA mRNA CTD PMID:38685157 Cenpa Mouse butan-1-ol multiple interactions ISO CENPA (Homo sapiens) 6480464 [[Gasoline co-treated with 1-Butanol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in decreased expression of CENPA mRNA CTD PMID:29432896 Cenpa Mouse cadmium atom decreases expression ISO CENPA (Homo sapiens) 6480464 Cadmium results in decreased expression of CENPA mRNA CTD PMID:24376830 and PMID:31646340 Cenpa Mouse cadmium atom multiple interactions ISO CENPA (Homo sapiens) 6480464 Cadmium inhibits the reaction [Fulvestrant results in decreased expression of CENPA mRNA] CTD PMID:31646340 Cenpa Mouse calcitriol decreases expression ISO CENPA (Homo sapiens) 6480464 Calcitriol results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Mouse calcitriol multiple interactions ISO CENPA (Homo sapiens) 6480464 [Testosterone co-treated with Calcitriol] results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Mouse cantharidin decreases expression EXP 6480464 Cantharidin results in decreased expression of CENPA mRNA CTD PMID:36907384 Cenpa Mouse carbon nanotube affects expression EXP 6480464 Nanotubes and Carbon affects the expression of CENPA mRNA CTD PMID:25554681 Cenpa Mouse chloroprene decreases expression EXP 6480464 Chloroprene results in decreased expression of CENPA mRNA CTD PMID:23125180 Cenpa Mouse choline multiple interactions EXP 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CENPA gene CTD PMID:20938992 Cenpa Mouse cisplatin multiple interactions ISO CENPA (Homo sapiens) 6480464 [Cisplatin co-treated with jinfukang] results in decreased expression of CENPA mRNA and [Piroxicam co-treated with Cisplatin] results in decreased expression of CENPA mRNA CTD PMID:21858171 and PMID:27392435 Cenpa Mouse cisplatin decreases expression ISO CENPA (Homo sapiens) 6480464 Cisplatin results in decreased expression of CENPA mRNA CTD PMID:27392435 and PMID:27594783 Cenpa Mouse cisplatin decreases expression EXP 6480464 Cisplatin results in decreased expression of CENPA mRNA CTD PMID:25270620 Cenpa Mouse cobalt dichloride decreases expression ISO CENPA (Homo sapiens) 6480464 cobaltous chloride results in decreased expression of CENPA mRNA CTD PMID:19320972 and PMID:19376846 Cenpa Mouse copper atom increases expression ISO Cenpa (Rattus norvegicus) 6480464 Copper results in increased expression of CENPA mRNA CTD PMID:30556269 Cenpa Mouse copper(0) increases expression ISO Cenpa (Rattus norvegicus) 6480464 Copper results in increased expression of CENPA mRNA CTD PMID:30556269 Cenpa Mouse copper(II) sulfate decreases expression ISO CENPA (Homo sapiens) 6480464 Copper Sulfate results in decreased expression of CENPA mRNA CTD PMID:19549813 Cenpa Mouse coumestrol multiple interactions ISO CENPA (Homo sapiens) 6480464 [Coumestrol co-treated with 2 more ... CTD PMID:19167446 Cenpa Mouse coumestrol increases expression ISO CENPA (Homo sapiens) 6480464 Coumestrol results in increased expression of CENPA mRNA CTD PMID:19167446 Cenpa Mouse crocidolite asbestos increases expression EXP 6480464 Asbestos and Crocidolite results in increased expression of CENPA mRNA CTD PMID:29279043 Cenpa Mouse CU-O LINKAGE decreases expression ISO CENPA (Homo sapiens) 6480464 cupric oxide results in decreased expression of CENPA mRNA CTD PMID:22077320 Cenpa Mouse cyclosporin A decreases expression ISO CENPA (Homo sapiens) 6480464 Cyclosporine results in decreased expression of CENPA mRNA CTD PMID:25562108 Cenpa Mouse cypermethrin increases expression EXP 6480464 cypermethrin results in increased expression of CENPA mRNA CTD PMID:29020013 Cenpa Mouse DDE increases expression ISO CENPA (Homo sapiens) 6480464 Dichlorodiphenyl Dichloroethylene results in increased expression of CENPA mRNA CTD PMID:38568856 Cenpa Mouse decabromodiphenyl ether increases expression ISO Cenpa (Rattus norvegicus) 6480464 decabromobiphenyl ether results in increased expression of CENPA mRNA CTD PMID:23914054 Cenpa Mouse dexamethasone multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Mouse diallyl trisulfide decreases expression ISO CENPA (Homo sapiens) 6480464 diallyl trisulfide results in decreased expression of CENPA mRNA CTD PMID:34995734 Cenpa Mouse diethylstilbestrol increases expression ISO Cenpa (Rattus norvegicus) 6480464 Diethylstilbestrol results in increased expression of CENPA mRNA CTD PMID:36653537 Cenpa Mouse dorsomorphin multiple interactions ISO CENPA (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CENPA mRNA CTD PMID:27188386 Cenpa Mouse doxorubicin affects response to substance ISO CENPA (Homo sapiens) 6480464 CENPA protein affects the susceptibility to Doxorubicin CTD PMID:16217747 Cenpa Mouse doxorubicin decreases expression ISO CENPA (Homo sapiens) 6480464 Doxorubicin results in decreased expression of CENPA protein CTD PMID:15870702 Cenpa Mouse endosulfan decreases expression ISO Cenpa (Rattus norvegicus) 6480464 Endosulfan results in decreased expression of CENPA mRNA CTD PMID:29391264 Cenpa Mouse Enterolactone multiple interactions ISO CENPA (Homo sapiens) 6480464 [Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in increased expression of CENPA mRNA CTD PMID:19167446 Cenpa Mouse folic acid multiple interactions EXP 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CENPA gene CTD PMID:20938992 Cenpa Mouse formaldehyde decreases expression ISO CENPA (Homo sapiens) 6480464 Formaldehyde results in decreased expression of CENPA mRNA CTD PMID:23649840 Cenpa Mouse FR900359 increases phosphorylation ISO CENPA (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of CENPA protein CTD PMID:37730182 Cenpa Mouse fulvestrant decreases expression ISO CENPA (Homo sapiens) 6480464 Fulvestrant results in decreased expression of CENPA mRNA CTD PMID:16514628 and PMID:31646340 Cenpa Mouse fulvestrant multiple interactions ISO CENPA (Homo sapiens) 6480464 Cadmium inhibits the reaction [Fulvestrant results in decreased expression of CENPA mRNA] and Fulvestrant inhibits the reaction [Estradiol results in increased expression of CENPA mRNA] CTD PMID:31646340 Cenpa Mouse furan increases methylation ISO Cenpa (Rattus norvegicus) 6480464 furan results in increased methylation of CENPA gene CTD PMID:22079235 Cenpa Mouse furan increases expression ISO Cenpa (Rattus norvegicus) 6480464 furan results in increased expression of CENPA mRNA CTD PMID:25539665 Cenpa Mouse genistein increases expression ISO CENPA (Homo sapiens) 6480464 Genistein results in increased expression of CENPA mRNA CTD PMID:16474171 Cenpa Mouse gentamycin decreases expression ISO Cenpa (Rattus norvegicus) 6480464 Gentamicins results in decreased expression of CENPA mRNA CTD PMID:33387578 Cenpa Mouse hydrogen peroxide decreases expression ISO CENPA (Homo sapiens) 6480464 Hydrogen Peroxide results in decreased expression of CENPA mRNA CTD PMID:12414654 Cenpa Mouse hydroquinone decreases expression ISO CENPA (Homo sapiens) 6480464 hydroquinone results in decreased expression of CENPA mRNA CTD PMID:23416264 Cenpa Mouse Indeno[1,2,3-cd]pyrene decreases expression ISO CENPA (Homo sapiens) 6480464 indeno(1 more ... CTD PMID:32251684 Cenpa Mouse indometacin multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Mouse isobutanol multiple interactions ISO CENPA (Homo sapiens) 6480464 [[Gasoline co-treated with isobutyl alcohol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in decreased expression of CENPA mRNA CTD PMID:29432896 Cenpa Mouse isoprenaline decreases expression EXP 6480464 Isoproterenol results in decreased expression of CENPA mRNA CTD PMID:20003209 Cenpa Mouse L-methionine multiple interactions EXP 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CENPA gene CTD PMID:20938992 Cenpa Mouse leflunomide decreases expression ISO CENPA (Homo sapiens) 6480464 leflunomide results in decreased expression of CENPA mRNA CTD PMID:28988120 Cenpa Mouse lidocaine increases expression ISO Cenpa (Rattus norvegicus) 6480464 Lidocaine results in increased expression of CENPA mRNA CTD PMID:35283115 Cenpa Mouse lipopolysaccharide multiple interactions ISO CENPA (Homo sapiens) 6480464 [NAT10 protein affects the susceptibility to Lipopolysaccharides] which affects the expression of CENPA mRNA CTD PMID:35877022 Cenpa Mouse lucanthone decreases expression ISO CENPA (Homo sapiens) 6480464 Lucanthone results in decreased expression of CENPA mRNA CTD PMID:21148553 Cenpa Mouse menadione decreases expression ISO CENPA (Homo sapiens) 6480464 Vitamin K 3 results in decreased expression of CENPA mRNA CTD PMID:12414654 Cenpa Mouse methimazole increases expression ISO Cenpa (Rattus norvegicus) 6480464 Methimazole results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Mouse methyl methanesulfonate decreases expression ISO CENPA (Homo sapiens) 6480464 Methyl Methanesulfonate results in decreased expression of CENPA mRNA CTD PMID:23649840 Cenpa Mouse methylseleninic acid affects expression ISO CENPA (Homo sapiens) 6480464 methylselenic acid affects the expression of CENPA mRNA CTD PMID:14617803 Cenpa Mouse N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal decreases expression EXP 6480464 benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in decreased expression of CENPA mRNA CTD PMID:25566086 Cenpa Mouse N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal multiple interactions EXP 6480464 MYBPC3 protein affects the reaction [benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in decreased expression of CENPA mRNA] CTD PMID:25566086 Cenpa Mouse N-methyl-N-nitrosourea decreases expression ISO CENPA (Homo sapiens) 6480464 Methylnitrosourea results in decreased expression of CENPA mRNA CTD PMID:27233451 Cenpa Mouse N-nitrosodiethylamine multiple interactions EXP 6480464 RB1 protein inhibits the reaction [Diethylnitrosamine results in increased expression of CENPA mRNA] CTD PMID:17854601 Cenpa Mouse N-nitrosodiethylamine increases expression EXP 6480464 Diethylnitrosamine results in increased expression of CENPA mRNA CTD PMID:17854601 and PMID:24535843 Cenpa Mouse N-Nitrosopyrrolidine decreases expression ISO CENPA (Homo sapiens) 6480464 N-Nitrosopyrrolidine results in decreased expression of CENPA mRNA CTD PMID:32234424 Cenpa Mouse niclosamide decreases expression ISO CENPA (Homo sapiens) 6480464 Niclosamide results in decreased expression of CENPA mRNA CTD PMID:28284560 Cenpa Mouse O-methyleugenol decreases expression ISO CENPA (Homo sapiens) 6480464 methyleugenol results in decreased expression of CENPA mRNA CTD PMID:32234424 Cenpa Mouse ozone multiple interactions EXP 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in increased expression of CENPA mRNA and [Air Pollutants results in increased abundance of Ozone] which results in increased expression of CENPA mRNA CTD PMID:27106289 and PMID:34911549 Cenpa Mouse palbociclib decreases expression ISO CENPA (Homo sapiens) 6480464 palbociclib results in decreased expression of CENPA mRNA CTD PMID:22869556 Cenpa Mouse paracetamol increases expression ISO CENPA (Homo sapiens) 6480464 Acetaminophen results in increased expression of CENPA mRNA CTD PMID:22230336 Cenpa Mouse paracetamol decreases expression ISO Cenpa (Rattus norvegicus) 6480464 Acetaminophen results in decreased expression of CENPA mRNA CTD PMID:33387578 Cenpa Mouse parathion decreases expression EXP 6480464 Parathion results in decreased expression of CENPA mRNA CTD PMID:34813904 Cenpa Mouse perfluorononanoic acid decreases expression ISO CENPA (Homo sapiens) 6480464 perfluoro-n-nonanoic acid results in decreased expression of CENPA mRNA CTD PMID:32588087 Cenpa Mouse phenobarbital multiple interactions EXP 6480464 NR1I3 protein affects the reaction [Phenobarbital results in increased expression of CENPA mRNA] CTD PMID:19482888 Cenpa Mouse phenobarbital affects expression EXP 6480464 Phenobarbital affects the expression of CENPA mRNA CTD PMID:23091169 Cenpa Mouse phenobarbital increases expression EXP 6480464 Phenobarbital results in increased expression of CENPA mRNA CTD PMID:19482888 Cenpa Mouse phenylmercury acetate decreases expression ISO CENPA (Homo sapiens) 6480464 Phenylmercuric Acetate results in decreased expression of CENPA mRNA CTD PMID:26272509 Cenpa Mouse phenylmercury acetate multiple interactions ISO CENPA (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CENPA mRNA CTD PMID:27188386 Cenpa Mouse pirinixic acid multiple interactions EXP 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in increased expression of CENPA mRNA CTD PMID:19710929 Cenpa Mouse pirinixic acid increases expression EXP 6480464 pirinixic acid results in increased expression of CENPA mRNA CTD PMID:18301758 Cenpa Mouse piroxicam multiple interactions ISO CENPA (Homo sapiens) 6480464 [Piroxicam co-treated with Cisplatin] results in decreased expression of CENPA mRNA CTD PMID:21858171 Cenpa Mouse potassium chromate multiple interactions ISO CENPA (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of CENPA mRNA CTD PMID:22079256 Cenpa Mouse potassium chromate decreases expression ISO CENPA (Homo sapiens) 6480464 potassium chromate(VI) results in decreased expression of CENPA mRNA CTD PMID:22079256 Cenpa Mouse pregnenolone 16alpha-carbonitrile increases expression ISO Cenpa (Rattus norvegicus) 6480464 Pregnenolone Carbonitrile results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Mouse progesterone decreases expression ISO CENPA (Homo sapiens) 6480464 Progesterone results in decreased expression of CENPA mRNA CTD PMID:21795739 Cenpa Mouse propanal decreases expression ISO CENPA (Homo sapiens) 6480464 propionaldehyde results in decreased expression of CENPA mRNA CTD PMID:26079696 Cenpa Mouse quercetin decreases expression ISO CENPA (Homo sapiens) 6480464 Quercetin results in decreased expression of CENPA mRNA CTD PMID:21632981 Cenpa Mouse raloxifene decreases expression ISO CENPA (Homo sapiens) 6480464 Raloxifene Hydrochloride results in decreased expression of CENPA mRNA CTD PMID:16514628 Cenpa Mouse resveratrol multiple interactions ISO CENPA (Homo sapiens) 6480464 [Coumestrol co-treated with resveratrol] results in increased expression of CENPA mRNA CTD PMID:19167446 Cenpa Mouse SB 431542 multiple interactions ISO CENPA (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CENPA mRNA CTD PMID:27188386 Cenpa Mouse silicon dioxide increases expression EXP 6480464 Silicon Dioxide results in increased expression of CENPA mRNA CTD PMID:29341224 Cenpa Mouse silver atom decreases expression ISO CENPA (Homo sapiens) 6480464 Silver results in decreased expression of CENPA mRNA CTD PMID:26014281 Cenpa Mouse silver(0) decreases expression ISO CENPA (Homo sapiens) 6480464 Silver results in decreased expression of CENPA mRNA CTD PMID:26014281 Cenpa Mouse sodium arsenite increases expression ISO CENPA (Homo sapiens) 6480464 sodium arsenite results in increased expression of CENPA mRNA CTD PMID:24570342 and PMID:29301061 Cenpa Mouse sodium arsenite decreases expression ISO CENPA (Homo sapiens) 6480464 sodium arsenite results in decreased expression of CENPA mRNA CTD PMID:38568856 Cenpa Mouse sodium arsenite decreases expression EXP 6480464 sodium arsenite results in decreased expression of CENPA mRNA CTD PMID:16014739 and PMID:17998272 Cenpa Mouse sodium arsenite decreases methylation ISO CENPA (Homo sapiens) 6480464 sodium arsenite results in decreased methylation of CENPA gene CTD PMID:24570342 Cenpa Mouse sulfadimethoxine increases expression ISO Cenpa (Rattus norvegicus) 6480464 Sulfadimethoxine results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Mouse sunitinib decreases expression ISO CENPA (Homo sapiens) 6480464 Sunitinib results in decreased expression of CENPA mRNA CTD PMID:31533062 Cenpa Mouse tamoxifen affects expression EXP 6480464 Tamoxifen affects the expression of CENPA mRNA CTD PMID:20937368 Cenpa Mouse tert-butyl hydroperoxide decreases expression ISO CENPA (Homo sapiens) 6480464 tert-Butylhydroperoxide results in decreased expression of CENPA mRNA CTD PMID:12414654 Cenpa Mouse testosterone multiple interactions ISO CENPA (Homo sapiens) 6480464 [Testosterone co-treated with Calcitriol] results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Mouse testosterone multiple interactions ISO Cenpa (Rattus norvegicus) 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CENPA mRNA CTD PMID:32741896 Cenpa Mouse testosterone decreases expression ISO CENPA (Homo sapiens) 6480464 Testosterone results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Mouse tetrachloromethane increases expression EXP 6480464 Carbon Tetrachloride results in increased expression of CENPA mRNA CTD PMID:17484886 Cenpa Mouse tetrachloromethane affects expression EXP 6480464 Carbon Tetrachloride affects the expression of CENPA mRNA CTD PMID:31919559 Cenpa Mouse thalidomide multiple interactions ISO CENPA (Homo sapiens) 6480464 [Azacitidine co-treated with Thalidomide] affects the expression of CENPA mRNA CTD PMID:18720364 Cenpa Mouse thapsigargin decreases expression ISO CENPA (Homo sapiens) 6480464 Thapsigargin results in decreased expression of CENPA mRNA CTD PMID:22378314 Cenpa Mouse thioacetamide increases expression ISO Cenpa (Rattus norvegicus) 6480464 Thioacetamide results in increased expression of CENPA mRNA CTD PMID:22659510 and PMID:23411599 Cenpa Mouse thioacetamide affects expression ISO Cenpa (Rattus norvegicus) 6480464 Thioacetamide affects the expression of CENPA mRNA CTD PMID:34492290 Cenpa Mouse thiram decreases expression ISO CENPA (Homo sapiens) 6480464 Thiram results in decreased expression of CENPA mRNA CTD PMID:38568856 Cenpa Mouse titanium dioxide decreases methylation EXP 6480464 titanium dioxide results in decreased methylation of CENPA gene CTD PMID:35295148 Cenpa Mouse trichloroethene increases methylation ISO Cenpa (Rattus norvegicus) 6480464 Trichloroethylene results in increased methylation of CENPA gene CTD PMID:27618143 Cenpa Mouse trichloroethene decreases expression ISO Cenpa (Rattus norvegicus) 6480464 Trichloroethylene results in decreased expression of CENPA mRNA CTD PMID:33387578 Cenpa Mouse trimellitic anhydride increases expression EXP 6480464 trimellitic anhydride results in increased expression of CENPA mRNA CTD PMID:19042947 Cenpa Mouse triptonide decreases expression EXP 6480464 triptonide results in decreased expression of CENPA mRNA CTD PMID:33045310 Cenpa Mouse troglitazone decreases expression ISO CENPA (Homo sapiens) 6480464 troglitazone results in decreased expression of CENPA mRNA CTD PMID:19140230 Cenpa Mouse trovafloxacin decreases expression EXP 6480464 trovafloxacin results in decreased expression of CENPA mRNA CTD PMID:35537566 Cenpa Mouse tungsten increases expression EXP 6480464 Tungsten results in increased expression of CENPA mRNA CTD PMID:30912803 Cenpa Mouse tunicamycin decreases expression ISO CENPA (Homo sapiens) 6480464 Tunicamycin results in decreased expression of CENPA mRNA CTD PMID:22378314 Cenpa Mouse valproic acid affects expression ISO CENPA (Homo sapiens) 6480464 Valproic Acid affects the expression of CENPA mRNA CTD PMID:25979313 Cenpa Mouse vincaleukoblastine affects response to substance ISO CENPA (Homo sapiens) 6480464 CENPA protein affects the susceptibility to Vinblastine CTD PMID:16217747 Cenpa Mouse zoledronic acid decreases expression ISO CENPA (Homo sapiens) 6480464 zoledronic acid results in decreased expression of CENPA mRNA CTD PMID:24714768
(-)-epigallocatechin 3-gallate (ISO) 1,1-dichloroethene (EXP) 1,2-dichloroethane (EXP) 1,2-dimethylhydrazine (ISO) 1-naphthyl isothiocyanate (ISO) 17alpha-ethynylestradiol (EXP) 17beta-estradiol (EXP,ISO) 17beta-estradiol 3-benzoate (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP) 2-methylcholine (ISO) 2-palmitoylglycerol (ISO) 3,3',4,4'-tetrachlorobiphenyl (EXP) 3-isobutyl-1-methyl-7H-xanthine (ISO) 3-methylcholanthrene (EXP) 4,4'-sulfonyldiphenol (ISO) 4-hydroxynon-2-enal (EXP) 4-hydroxyphenyl retinamide (EXP) 5-azacytidine (ISO) 6-propyl-2-thiouracil (ISO) acetamide (ISO) acrylamide (ISO) afimoxifene (ISO) aflatoxin B1 (EXP,ISO) all-trans-retinoic acid (ISO) amitrole (ISO) arsenite(3-) (EXP,ISO) azathioprine (ISO) benzo[a]pyrene (EXP,ISO) benzo[a]pyrene diol epoxide I (ISO) benzo[b]fluoranthene (EXP) bis(2-chloroethyl) sulfide (ISO) bisphenol A (EXP,ISO) bisphenol F (EXP) butan-1-ol (ISO) cadmium atom (ISO) calcitriol (ISO) cantharidin (EXP) carbon nanotube (EXP) chloroprene (EXP) choline (EXP) cisplatin (EXP,ISO) cobalt dichloride (ISO) copper atom (ISO) copper(0) (ISO) copper(II) sulfate (ISO) coumestrol (ISO) crocidolite asbestos (EXP) CU-O LINKAGE (ISO) cyclosporin A (ISO) cypermethrin (EXP) DDE (ISO) decabromodiphenyl ether (ISO) dexamethasone (ISO) diallyl trisulfide (ISO) diethylstilbestrol (ISO) dorsomorphin (ISO) doxorubicin (ISO) endosulfan (ISO) Enterolactone (ISO) folic acid (EXP) formaldehyde (ISO) FR900359 (ISO) fulvestrant (ISO) furan (ISO) genistein (ISO) gentamycin (ISO) hydrogen peroxide (ISO) hydroquinone (ISO) Indeno[1,2,3-cd]pyrene (ISO) indometacin (ISO) isobutanol (ISO) isoprenaline (EXP) L-methionine (EXP) leflunomide (ISO) lidocaine (ISO) lipopolysaccharide (ISO) lucanthone (ISO) menadione (ISO) methimazole (ISO) methyl methanesulfonate (ISO) methylseleninic acid (ISO) N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (EXP) N-methyl-N-nitrosourea (ISO) N-nitrosodiethylamine (EXP) N-Nitrosopyrrolidine (ISO) niclosamide (ISO) O-methyleugenol (ISO) ozone (EXP) palbociclib (ISO) paracetamol (ISO) parathion (EXP) perfluorononanoic acid (ISO) phenobarbital (EXP) phenylmercury acetate (ISO) pirinixic acid (EXP) piroxicam (ISO) potassium chromate (ISO) pregnenolone 16alpha-carbonitrile (ISO) progesterone (ISO) propanal (ISO) quercetin (ISO) raloxifene (ISO) resveratrol (ISO) SB 431542 (ISO) silicon dioxide (EXP) silver atom (ISO) silver(0) (ISO) sodium arsenite (EXP,ISO) sulfadimethoxine (ISO) sunitinib (ISO) tamoxifen (EXP) tert-butyl hydroperoxide (ISO) testosterone (ISO) tetrachloromethane (EXP) thalidomide (ISO) thapsigargin (ISO) thioacetamide (ISO) thiram (ISO) titanium dioxide (EXP) trichloroethene (ISO) trimellitic anhydride (EXP) triptonide (EXP) troglitazone (ISO) trovafloxacin (EXP) tungsten (EXP) tunicamycin (ISO) valproic acid (ISO) vincaleukoblastine (ISO) zoledronic acid (ISO)
1.
Gene structure and sequence analysis of mouse centromere proteins A and C.
Kalitsis P, etal., Genomics 1998 Jan 1;47(1):108-14.
2.
Functional annotation of a full-length mouse cDNA collection.
Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.
Hepatitis B virus X protein mutant upregulates CENP-A expression in hepatoma cells.
Liu L, etal., Oncol Rep. 2012 Jan;27(1):168-73. doi: 10.3892/or.2011.1478. Epub 2011 Sep 28.
4.
MGDs mouse GO annotations
MGD data from the GO Consortium
5.
MGD IEA
MGD IEA
6.
Autoepitopes on autoantigen centromere protein-A (CENP-A) are restricted to the N-terminal region, which has no homology with histone H3.
Muro Y, etal., Clin Exp Immunol. 2000 Apr;120(1):218-23. doi: 10.1046/j.1365-2249.2000.01189.x.
7.
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8.
Mouse MP Annotation Import Pipeline
RGD automated import pipeline
9.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
Cenpa Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 30,824,214 - 30,832,181 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 30,824,121 - 30,832,174 (+) Ensembl GRCm39 Ensembl GRCm38 5 30,666,877 - 30,674,837 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 30,666,777 - 30,674,830 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 30,969,275 - 30,977,199 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 30,943,483 - 30,951,407 (+) NCBI MGSCv36 mm8 Celera 5 28,145,648 - 28,153,572 (+) NCBI Celera Cytogenetic Map 5 B1 NCBI cM Map 5 16.76 NCBI
CENPA Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 26,786,056 - 26,794,589 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 26,764,289 - 26,801,067 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 27,008,924 - 27,017,457 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 26,862,386 - 26,870,961 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 26,920,571 - 26,929,105 NCBI Celera 2 26,854,943 - 26,863,518 (+) NCBI Celera Cytogenetic Map 2 p23.3 NCBI HuRef 2 26,750,612 - 26,759,190 (+) NCBI HuRef CHM1_1 2 26,938,614 - 26,947,189 (+) NCBI CHM1_1 T2T-CHM13v2.0 2 26,827,645 - 26,836,182 (+) NCBI T2T-CHM13v2.0
Cenpa Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 31,420,062 - 31,431,703 (-) NCBI GRCr8 mRatBN7.2 6 25,700,142 - 25,711,767 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 25,700,142 - 25,711,675 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 6 26,004,502 - 26,011,743 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 6 26,320,374 - 26,327,620 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 6 25,800,027 - 25,807,259 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 6 27,072,259 - 27,080,863 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 27,072,166 - 27,080,856 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 36,887,831 - 36,896,429 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 25,686,603 - 25,693,840 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 6 25,193,302 - 25,201,670 (-) NCBI Celera Cytogenetic Map 6 q14 NCBI
Cenpa Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955469 8,799,071 - 8,819,876 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955469 8,799,312 - 8,819,637 (+) NCBI ChiLan1.0 ChiLan1.0
CENPA Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 12 99,713,881 - 99,728,841 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2A 99,717,857 - 99,732,808 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2A 26,785,301 - 26,800,178 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3
CENPA Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 20,808,320 - 20,833,747 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 20,811,663 - 20,819,568 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 20,705,452 - 20,727,630 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 21,132,793 - 21,155,222 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 21,132,865 - 21,141,662 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 20,819,646 - 20,841,970 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 20,831,002 - 20,853,359 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 20,877,019 - 20,899,384 (+) NCBI UU_Cfam_GSD_1.0
Cenpa Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024406292 65,118,691 - 65,128,436 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936493 5,714,782 - 5,720,837 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936493 5,715,274 - 5,720,816 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CENPA Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 112,263,915 - 112,272,621 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 112,263,912 - 112,272,638 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 119,263,793 - 119,272,512 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CENPA Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 14 80,838,049 - 80,847,609 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 14 80,839,335 - 80,846,608 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666045 31,298,072 - 31,307,015 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Cenpa
.
Predicted Target Of
Count of predictions: 1309 Count of miRNA genes: 453 Interacting mature miRNAs: 516 Transcripts: ENSMUST00000031073, ENSMUST00000133316, ENSMUST00000134372, ENSMUST00000134846, ENSMUST00000144742, ENSMUST00000149759, ENSMUST00000150810 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1301776 Skts3_m skin tumor susceptibility 3 (mouse) Not determined 5 21667295 55667403 Mouse 1301685 Estq2_m estradiol regulated response QTL 2 (mouse) Not determined 5 15634084 49634190 Mouse 11537367 Hmtb11_m hemostasis and thrombosis 11 (mouse) 5 22100823 64806579 Mouse 4141207 Imrfq1_m immune response to Factor IX QTL 1 (mouse) Not determined 5 8124117 42124239 Mouse 11537368 Hmtb10_m hemostasis and thrombosis 10 (mouse) 5 22100823 54500318 Mouse 7394748 Mom5_m modifier of Min 5 (mouse) Not determined 5 8847672 33475637 Mouse 15039371 Nmrs21_m NAFLD-associated magnetic resonance shift 21 (mouse) 5 3504823 37504823 Mouse 1301693 Sle6_m systemic lupus erythematosus susceptibility 6 (mouse) Not determined 5 8890693 87841837 Mouse 1300701 Cd8ts1_m CD8 T cell subset 1 (mouse) Not determined 5 27215348 61215451 Mouse 1357478 Kdnw1_m kidney weight 1 (mouse) Not determined 5 8915949 40529869 Mouse 11341716 Rvfs3_m Rift Valley fever susceptibility 3 (mouse) 5 26441234 138455402 Mouse 14696730 Kidlq1_m kidney weight, left QTL 1 (mouse) 5 13563152 47563152 Mouse 10401122 Pgia41_m proteoglycan induced arthritis 41 (mouse) Not determined 5 823144 34823280 Mouse 1300719 Iba5_m induction of brown adipocytes 5 (mouse) Not determined 5 20686993 54687134 Mouse 1301806 Actd2_m activity-distance traveled 2 (mouse) Not determined 5 5384520 39384652 Mouse
AF012709
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 5 30,674,053 - 30,674,143 UniSTS GRCm38 MGSCv37 5 30,976,426 - 30,976,516 UniSTS GRCm37 Celera 5 28,152,799 - 28,152,889 UniSTS Cytogenetic Map 5 B1 UniSTS cM Map 5 18.0 UniSTS Whitehead/MRC_RH 5 386.0 UniSTS
UniSTS:235154
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 5 30,672,480 - 30,672,574 UniSTS GRCm38 MGSCv37 5 30,974,853 - 30,974,947 UniSTS GRCm37 Celera 5 28,151,226 - 28,151,320 UniSTS Cytogenetic Map 5 B1 UniSTS cM Map 5 18.0 UniSTS
PMC15551P1
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 5 30,672,468 - 30,672,828 UniSTS GRCm38 MGSCv37 5 30,974,841 - 30,975,201 UniSTS GRCm37 Celera 5 28,151,214 - 28,151,574 UniSTS Cytogenetic Map 5 B1 UniSTS cM Map 5 18.0 UniSTS
PMC15551P2
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 5 30,672,293 - 30,672,423 UniSTS GRCm38 MGSCv37 5 30,974,666 - 30,974,796 UniSTS GRCm37 Celera 5 28,151,039 - 28,151,169 UniSTS Cytogenetic Map 5 B1 UniSTS cM Map 5 18.0 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000031073 ⟹ ENSMUSP00000031073
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,318 - 30,831,753 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,974 - 30,674,409 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000133316 ⟹ ENSMUSP00000123493
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,241 - 30,831,722 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,897 - 30,674,378 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000134372
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,829,299 - 30,831,546 (+) Ensembl GRCm38.p6 Ensembl 5 30,671,955 - 30,674,202 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000134846 ⟹ ENSMUSP00000119363
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,256 - 30,831,659 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,912 - 30,674,315 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000144742 ⟹ ENSMUSP00000122831
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,121 - 30,832,174 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,777 - 30,674,830 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000149759 ⟹ ENSMUSP00000142915
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,287 - 30,827,103 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,943 - 30,669,759 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000150810
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,279 - 30,831,753 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,935 - 30,674,409 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000197962
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,304 - 30,828,109 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,960 - 30,670,765 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000199320 ⟹ ENSMUSP00000143575
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,301 - 30,831,408 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,957 - 30,674,064 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000199617 ⟹ ENSMUSP00000142917
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 5 30,824,342 - 30,831,730 (+) Ensembl GRCm38.p6 Ensembl 5 30,666,998 - 30,674,386 (+) Ensembl
RefSeq Acc Id:
NM_001302129 ⟹ NP_001289058
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,230 - 30,832,181 (+) NCBI GRCm38 5 30,666,886 - 30,674,837 (+) NCBI Celera 5 28,145,632 - 28,153,583 (+) NCBI
Sequence:
GAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTCCTGACGCGCACCTTGGGCTTGCTCGCGTTCGGTTTCGGCAGCAGGACCAAGAAGGCTTAGGGAAGGCGGCGGGACCCGGC
hide sequence
RefSeq Acc Id:
NM_001302130 ⟹ NP_001289059
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,230 - 30,832,181 (+) NCBI GRCm38 5 30,666,886 - 30,674,837 (+) NCBI Celera 5 28,145,632 - 28,153,583 (+) NCBI
Sequence:
GAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTCCTGACGCGCACCTTGGGCTTGCTCGCGTTCGGTTTCGGCAGCAGGACCAAGAAGGCTTAGGGAAGGCGGCGGGACCCGGC
hide sequence
RefSeq Acc Id:
NM_001302131 ⟹ NP_001289060
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,230 - 30,832,181 (+) NCBI GRCm38 5 30,666,886 - 30,674,837 (+) NCBI Celera 5 28,145,632 - 28,153,583 (+) NCBI
Sequence:
GAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTCCTGACGCGCACCTTGGGCTTGCTCGCGTTCGGTTTCGGCAGCAGGACCAAGAAGGCTTAGGGAAGGCGGCGGGACCCGGC
hide sequence
RefSeq Acc Id:
NM_001302132 ⟹ NP_001289061
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,230 - 30,832,181 (+) NCBI GRCm38 5 30,666,886 - 30,674,837 (+) NCBI Celera 5 28,145,632 - 28,153,583 (+) NCBI
Sequence:
GAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTCCTGACGCGCACCTTGG
hide sequence
RefSeq Acc Id:
NM_001421447 ⟹ NP_001408376
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,241 - 30,832,171 (+) NCBI
RefSeq Acc Id:
NM_001421448 ⟹ NP_001408377
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,241 - 30,832,171 (+) NCBI
RefSeq Acc Id:
NM_001421449 ⟹ NP_001408378
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,241 - 30,832,171 (+) NCBI
RefSeq Acc Id:
NM_007681 ⟹ NP_031707
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,230 - 30,832,181 (+) NCBI GRCm38 5 30,666,886 - 30,674,837 (+) NCBI MGSCv37 5 30,969,275 - 30,977,199 (+) RGD Celera 5 28,145,632 - 28,153,583 (+) NCBI cM Map 5 ENTREZGENE
Sequence:
GAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTCCTGACGCGCACCTTGGGCTTGCTCGCGTTCGGTTTCGGCAGCAGGACCAAGAAGGCTTAGGGAAGGCGGCGGGACCCGGC
hide sequence
RefSeq Acc Id:
NR_126074
RefSeq Status:
REVIEWED
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,230 - 30,832,181 (+) NCBI GRCm38 5 30,666,886 - 30,674,837 (+) NCBI Celera 5 28,145,632 - 28,153,583 (+) NCBI
Sequence:
GAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTCCTGACGCGCACCTTGGGCTTGCTCGCGTTCGGTTTCGGCAGCAGGACCAAGAAGGCTTAGGGAAGGCGGCGGGACCCGGC
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RefSeq Acc Id:
NR_185302
RefSeq Status:
REVIEWED
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,241 - 30,832,171 (+) NCBI
RefSeq Acc Id:
NR_185303
RefSeq Status:
REVIEWED
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,241 - 30,832,171 (+) NCBI
RefSeq Acc Id:
NR_185304
RefSeq Status:
REVIEWED
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,241 - 30,832,171 (+) NCBI
RefSeq Acc Id:
XM_036164762 ⟹ XP_036020655
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,263 - 30,831,753 (+) NCBI
Sequence:
CGAGTTCTGGCGGTCCTGACGCGCACCTTGGGCTTGCTCGCGTTCGGTTTCGGCAGCAGGACCAAGAAGGCTTAGGGAAGGCGGCGGGACCCGGCCCCTCGAGGCCAGCCATGGGCCCGCGTCGCAAA
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RefSeq Acc Id:
XR_004942431
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 5 30,824,214 - 30,831,753 (+) NCBI
Sequence:
TTAAAAGATGCGGTGGGAGGGGCGGGTGATTTTTTGAACTGCTGGCGACCGAGTTCTGGCGGTC
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RefSeq Acc Id:
NP_031707 ⟸ NM_007681
- Peptide Label:
isoform 1
- UniProtKB:
Q545C9 (UniProtKB/Swiss-Prot), O35216 (UniProtKB/Swiss-Prot)
- Sequence:
MGPRRKPQTPRRRPSSPAPGPSRQSSSVGSQTLRRRQKFMWLKEIKTLQKSTDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTLFPKDIQLTRRIRG
hide sequence
RefSeq Acc Id:
NP_001289060 ⟸ NM_001302131
- Peptide Label:
isoform 2
- UniProtKB:
O35216 (UniProtKB/Swiss-Prot)
- Sequence:
MDGSQTLRRRQKFMWLKEIKTLQKSTDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQE
hide sequence
RefSeq Acc Id:
NP_001289059 ⟸ NM_001302130
- Peptide Label:
isoform 2
- UniProtKB:
O35216 (UniProtKB/Swiss-Prot)
- Sequence:
MDGSQTLRRRQKFMWLKEIKTLQKSTDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQE
hide sequence
RefSeq Acc Id:
NP_001289058 ⟸ NM_001302129
- Peptide Label:
isoform 2
- UniProtKB:
O35216 (UniProtKB/Swiss-Prot)
- Sequence:
MDGSQTLRRRQKFMWLKEIKTLQKSTDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQE
hide sequence
RefSeq Acc Id:
NP_001289061 ⟸ NM_001302132
- Peptide Label:
isoform 3
- UniProtKB:
A0A0G2JGI2 (UniProtKB/TrEMBL)
- Sequence:
MGPRRKPQTPRRRPSSPAPGPSRQSSSVGSQTLRRRQKFMWLKEIKTLQKSTDLLFRKKPFSMV
hide sequence
Ensembl Acc Id:
ENSMUSP00000122831 ⟸ ENSMUST00000144742
Ensembl Acc Id:
ENSMUSP00000031073 ⟸ ENSMUST00000031073
Ensembl Acc Id:
ENSMUSP00000123493 ⟸ ENSMUST00000133316
Ensembl Acc Id:
ENSMUSP00000142917 ⟸ ENSMUST00000199617
Ensembl Acc Id:
ENSMUSP00000143575 ⟸ ENSMUST00000199320
Ensembl Acc Id:
ENSMUSP00000142915 ⟸ ENSMUST00000149759
Ensembl Acc Id:
ENSMUSP00000119363 ⟸ ENSMUST00000134846
RefSeq Acc Id:
XP_036020655 ⟸ XM_036164762
- Peptide Label:
isoform X2
RefSeq Acc Id:
NP_001408376 ⟸ NM_001421447
- Peptide Label:
isoform 2
RefSeq Acc Id:
NP_001408378 ⟸ NM_001421449
- Peptide Label:
isoform 5
RefSeq Acc Id:
NP_001408377 ⟸ NM_001421448
- Peptide Label:
isoform 4
RGD ID: 6886294 Promoter ID: EPDNEW_M6598 Type: initiation region Name: Cenpa_1 Description: Mus musculus centromere protein A , transcript variant 5, mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 5 30,666,930 - 30,666,990 EPDNEW
RGD ID: 6837257 Promoter ID: MM_KWN:41768 Type: CpG-Island SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen Transcripts: OTTMUST00000053011, OTTMUST00000053014, OTTMUST00000053015, OTTMUST00000053016, UC008WVU.1, UC008WVV.1 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 5 30,968,924 - 30,969,424 (+) MPROMDB
