Pigv (phosphatidylinositol glycan anchor biosynthesis, class V) - Rat Genome Database

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Gene: Pigv (phosphatidylinositol glycan anchor biosynthesis, class V) Mus musculus
Analyze
Symbol: Pigv
Name: phosphatidylinositol glycan anchor biosynthesis, class V
RGD ID: 1551568
MGI Page MGI
Description: Predicted to enable mannosyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be part of mannosyltransferase complex. Predicted to be active in endoplasmic reticulum membrane. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in hyperphosphatasia with impaired intellectual development syndrome 1. Orthologous to human PIGV (phosphatidylinositol glycan anchor biosynthesis class V).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: B330013B03; D430024F16Rik; GPI mannosyltransferase 2; GPI mannosyltransferase II; GPI-MT-II; phosphatidylinositol glycan class V; phosphatidylinositol glycan, class V; phosphatidylinositol-glycan biosynthesis class V protein; PIG-V
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394133,387,071 - 133,401,498 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4133,387,698 - 133,399,958 (-)EnsemblGRCm39 Ensembl
GRCm384133,659,359 - 133,673,995 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4133,660,387 - 133,672,647 (-)EnsemblGRCm38mm10GRCm38
MGSCv374133,217,340 - 133,228,562 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364132,932,463 - 132,944,696 (-)NCBIMGSCv36mm8
Celera4131,837,214 - 131,848,418 (-)NCBICelera
Cytogenetic Map4D2.3NCBI
cM Map466.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Identity-by-descent filtering of exome sequence data identifies PIGV mutations in hyperphosphatasia mental retardation syndrome. Krawitz PM, etal., Nat Genet. 2010 Oct;42(10):827-9. doi: 10.1038/ng.653. Epub 2010 Aug 29.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15623507   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693   PMID:21267068   PMID:21873635   PMID:25807483   PMID:33402532  


Genomics

Comparative Map Data
Pigv
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394133,387,071 - 133,401,498 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4133,387,698 - 133,399,958 (-)EnsemblGRCm39 Ensembl
GRCm384133,659,359 - 133,673,995 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4133,660,387 - 133,672,647 (-)EnsemblGRCm38mm10GRCm38
MGSCv374133,217,340 - 133,228,562 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364132,932,463 - 132,944,696 (-)NCBIMGSCv36mm8
Celera4131,837,214 - 131,848,418 (-)NCBICelera
Cytogenetic Map4D2.3NCBI
cM Map466.25NCBI
PIGV
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,787,054 - 26,800,659 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl126,787,054 - 26,800,659 (+)EnsemblGRCh38hg38GRCh38
GRCh37127,113,545 - 27,127,150 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,987,073 - 26,997,474 (+)NCBINCBI36Build 36hg18NCBI36
Build 34126,798,627 - 26,809,028NCBI
Celera125,511,490 - 25,521,891 (+)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef125,367,661 - 25,377,950 (+)NCBIHuRef
CHM1_1127,227,705 - 27,238,150 (+)NCBICHM1_1
T2T-CHM13v2.0126,625,009 - 26,638,614 (+)NCBIT2T-CHM13v2.0
Pigv
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85151,173,486 - 151,185,748 (-)NCBIGRCr8
mRatBN7.25145,889,642 - 145,901,533 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5145,889,646 - 145,901,533 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5148,592,104 - 148,603,965 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05150,361,709 - 150,373,570 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05150,348,264 - 150,360,125 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05151,886,132 - 151,899,024 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5151,886,035 - 151,898,022 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05155,574,856 - 155,587,320 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45151,404,858 - 151,416,748 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15151,414,896 - 151,426,783 (+)NCBI
Celera5144,310,621 - 144,322,511 (-)NCBICelera
Cytogenetic Map5q36NCBI
Pigv
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554526,128,262 - 6,139,204 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554526,128,262 - 6,139,204 (+)NCBIChiLan1.0ChiLan1.0
PIGV
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21200,069,629 - 200,081,624 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11199,168,830 - 199,185,921 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0126,051,863 - 26,065,415 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1127,108,230 - 27,119,055 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl127,109,102 - 27,119,055 (+)Ensemblpanpan1.1panPan2
PIGV
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,315,589 - 73,326,116 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl273,315,568 - 73,324,831 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha269,892,989 - 69,903,513 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0273,878,780 - 73,889,304 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl273,878,792 - 73,888,062 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1270,703,670 - 70,714,191 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0271,709,231 - 71,719,738 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0272,712,637 - 72,723,158 (-)NCBIUU_Cfam_GSD_1.0
Pigv
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505845,378,926 - 45,390,936 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647411,205,368 - 11,216,528 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647411,204,595 - 11,215,677 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIGV
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,129,586 - 84,139,249 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1684,129,911 - 84,139,252 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2677,700,306 - 77,709,625 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PIGV
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120105,964,491 - 105,977,459 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20105,962,105 - 105,972,231 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603310,452,873 - 10,466,103 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pigv
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476410,767,552 - 10,780,738 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476410,765,842 - 10,813,938 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pigv
354 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1259
Count of miRNA genes:641
Interacting mature miRNAs:787
Transcripts:ENSMUST00000062118, ENSMUST00000067902, ENSMUST00000151837
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
15039377Bw45_mbody weight QTL 45 (mouse)4105705794139705794Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
15039382Ltgq7_mliver triglyceride QTL 7 (mouse)4105705794139705794Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
25394568Skmw56_mskeletal muscle weight 56, EDL (mouse)4129859344133710576Mouse
1301847Fecq2_mfecundity QTL 2 (mouse)Not determined4100071971134072206Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
4141065Shali2_msurvival time to hyperoxic acute lung injury 2 (mouse)Not determined124055093141572792Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
25394567Skmw55_mskeletal muscle weight 55, gastroc (mouse)4131437804133710576Mouse
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
1300781Lith8_mlithogenic gene 8 (mouse)Not determined4107264957141265153Mouse
10755521Hct1_mhematocrit 1 (mouse)4108477692142477692Mouse
4141001Tgq17_mtriglyceride QTL 17 (mouse)Not determined112523489146523489Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
12904009Cfq9_mconditioned fear QTL 9 (mouse)4130036287133772722Mouse
4141154Nba1_mNew Zealand Black autoimmunity 1 (mouse)Not determined131650724140879275Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
14696808Rbcn1_mrod bipolar cell number 1 (mouse)4131947311134047311Mouse
1300663Start2_mstartle response 2 (mouse)Not determined4107264957141265153Mouse
10755520Rbc1_mred blood cell count 1 (mouse)4108477692142477692Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
1300839Dyscalc2_mdystrophic cardiac calcinosis 2 (mouse)Not determined4111009051145009280Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
1302149Tlsr2_mthymic lymphoma suppressor region 2 (mouse)Not determined4124264957142230960Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1301106Skts7_mskin tumor susceptibility 7 (mouse)Not determined4100071971134072206Mouse
12880433Fgf23lq1_mFGF23 serum level QTL 1 (mouse)4101157197135157197Mouse
10755522Hgb1_mhemoglobin 1 (mouse)4108477692142477692Mouse
1301793Tlsr3_mthymic lymphoma suppressor region 3 (mouse)Not determined4129465811136864536Mouse
15039385Mvlq3_mmacrovesicular liver lesion QTL 3 (mouse)4112182386146182386Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
27226757Femd1_mfemur midshaft diameter 1, 5 week (mouse)4123993793144326570Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
15039378Adip30_madiposity 30 (mouse)4105705794139705794Mouse
1357800Tgq3_mtriglyceride QTL 3 (mouse)Not determined4107055093141055180Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1300809Ccrs2_mcorpus callosum hemisphere surface size 2 (mouse)Not determined4107264957141265153Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
12910808Pwbwq9_mpost-weaning body weight QTL 9 (mouse)4105835310141433838Mouse
12910813Pwbwq4_mpre-weaning body weight QTL 4 (mouse)4105835310141433838Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107791564141791756Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1300917Gasa1_mgastritis type A susceptibility locus 1 (mouse)Not determined4124055093142438020Mouse
4142082Psds2_mpsoriasis-like skin disease severity 2 (mouse)Not determined4133154678137617995Mouse

Markers in Region
UniSTS:235057  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384133,662,548 - 133,662,777UniSTSGRCm38
MGSCv374133,218,463 - 133,218,692UniSTSGRCm37
Celera4131,838,336 - 131,838,565UniSTS
Cytogenetic Map4D3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001145955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001356466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK046527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX537327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY104545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000062118   ⟹   ENSMUSP00000050647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4133,387,698 - 133,399,958 (-)Ensembl
GRCm38.p6 Ensembl4133,660,387 - 133,672,647 (-)Ensembl
RefSeq Acc Id: ENSMUST00000067902   ⟹   ENSMUSP00000065601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4133,389,565 - 133,399,958 (-)Ensembl
GRCm38.p6 Ensembl4133,662,254 - 133,672,647 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4133,396,068 - 133,399,958 (-)Ensembl
GRCm38.p6 Ensembl4133,668,757 - 133,672,647 (-)Ensembl
RefSeq Acc Id: NM_001145955   ⟹   NP_001139427
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394133,388,736 - 133,399,958 (-)NCBI
GRCm384133,661,425 - 133,672,647 (-)NCBI
MGSCv374133,217,340 - 133,228,562 (-)RGD
Celera4131,837,214 - 131,848,418 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001145956   ⟹   NP_001139428
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394133,388,736 - 133,399,958 (-)NCBI
GRCm384133,661,425 - 133,672,647 (-)NCBI
MGSCv374133,217,340 - 133,228,562 (-)RGD
Celera4131,837,214 - 131,848,418 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001356466   ⟹   NP_001343395
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394133,388,736 - 133,400,477 (-)NCBI
GRCm384133,661,425 - 133,673,166 (-)NCBI
Sequence:
RefSeq Acc Id: NM_178698   ⟹   NP_848813
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394133,388,736 - 133,399,958 (-)NCBI
GRCm384133,661,425 - 133,672,647 (-)NCBI
MGSCv374133,217,340 - 133,228,562 (-)RGD
Celera4131,837,214 - 131,848,418 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030253468   ⟹   XP_030109328
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394133,387,071 - 133,401,498 (-)NCBI
GRCm384133,659,359 - 133,673,995 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_848813   ⟸   NM_178698
- Peptide Label: isoform 1
- UniProtKB: Q8BWH9 (UniProtKB/Swiss-Prot),   Q8BJR5 (UniProtKB/Swiss-Prot),   Q8BGL2 (UniProtKB/Swiss-Prot),   Q8BXF5 (UniProtKB/Swiss-Prot),   Q7TPN3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001139427   ⟸   NM_001145955
- Peptide Label: isoform 2
- UniProtKB: Q7TPN3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001139428   ⟸   NM_001145956
- Peptide Label: isoform 3
- UniProtKB: Q7TPN3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030109328   ⟸   XM_030253468
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001343395   ⟸   NM_001356466
- Peptide Label: isoform 1
- UniProtKB: Q8BWH9 (UniProtKB/Swiss-Prot),   Q8BJR5 (UniProtKB/Swiss-Prot),   Q8BGL2 (UniProtKB/Swiss-Prot),   Q7TPN3 (UniProtKB/Swiss-Prot),   Q8BXF5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000065601   ⟸   ENSMUST00000067902
RefSeq Acc Id: ENSMUSP00000050647   ⟸   ENSMUST00000062118

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TPN3-F1-model_v2 AlphaFold Q7TPN3 1-493 view protein structure

Promoters
RGD ID:6834666
Promoter ID:MM_KWN:40034
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:AK006675_1700041L08RIK,   NM_001145955,   OTTMUST00000025792,   OTTMUST00000025793,   OTTMUST00000025794,   OTTMUST00000025795,   OTTMUST00000025798,   UC008VDG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364133,227,371 - 133,229,442 (+)MPROMDB
RGD ID:6884968
Promoter ID:EPDNEW_M5935
Type:multiple initiation site
Name:Pigv_1
Description:Mus musculus phosphatidylinositol glycan anchor biosynthesis,class V , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384133,672,635 - 133,672,695EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442480 AgrOrtholog
Ensembl Genes ENSMUSG00000043257 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000062118 ENTREZGENE
  ENSMUST00000062118.11 UniProtKB/Swiss-Prot
  ENSMUST00000067902 ENTREZGENE
  ENSMUST00000067902.13 UniProtKB/Swiss-Prot
InterPro PIG-V/Gpi18 UniProtKB/Swiss-Prot
KEGG Report mmu:230801 UniProtKB/Swiss-Prot
MGD MGI:2442480 ENTREZGENE
NCBI Gene 230801 ENTREZGENE
PANTHER GPI MANNOSYLTRANSFERASE 2 UniProtKB/Swiss-Prot
  PTHR12468 UniProtKB/Swiss-Prot
Pfam Mannosyl_trans2 UniProtKB/Swiss-Prot
PhenoGen Pigv PhenoGen
UniProt PIGV_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BGL2 ENTREZGENE
  Q8BJR5 ENTREZGENE
  Q8BWH9 ENTREZGENE
  Q8BXF5 ENTREZGENE
UniProt Secondary Q8BGL2 UniProtKB/Swiss-Prot
  Q8BJR5 UniProtKB/Swiss-Prot
  Q8BWH9 UniProtKB/Swiss-Prot
  Q8BXF5 UniProtKB/Swiss-Prot