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Gene: URB1 (URB1 ribosome biogenesis homolog) Sus scrofa

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Symbol:

URB1

Name:

URB1 ribosome biogenesis homolog (Ensembl:URB1 ribosome biosis homolog)

RGD ID:

14284475

Description:

ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); FOUND IN fibrillar center (inferred); nucleolus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

nucleolar pre-ribosomal-associated protein 1; URB1 ribosome biogenesis 1 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	195,974,790 - 196,047,863 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	195,974,790 - 196,047,882 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
URB1	Pig	amyotrophic lateral sclerosis type 1		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: Amyotrophic lateral sclerosis type 1	ClinVar	PMID:17237124\|PMID:23512985\|PMID:28492532
URB1	Pig	autosomal dominant intellectual developmental disorder 7		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: DYRK1A-related intellectual disability syndrome	ClinVar	PMID:17237124\|PMID:23512985\|PMID:28492532
URB1	Pig	Familial Platelet Disorder with Associated Myeloid Malignancy		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: Hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1	ClinVar	PMID:17237124\|PMID:23512985\|PMID:28492532
URB1	Pig	genetic disease		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar
URB1	Pig	Glucocorticoid Deficiency 2		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: Glucocorticoid deficiency 2 \| ClinVar Annotator: match by term: MRAP-related more ...	ClinVar	PMID:25741868\|PMID:28492532
URB1	Pig	immunodeficiency 28		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: Immunodeficiency 28	ClinVar	PMID:17237124\|PMID:23512985\|PMID:28492532
URB1	Pig	Parkinson's disease 20		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: Early-onset Parkinson disease 20	ClinVar	PMID:28492532
URB1	Pig	ZTTK syndrome		ISO	RGD:1353651	8554872	ClinVar Annotator: match by term: ZTTK syndrome	ClinVar	PMID:25741868

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
URB1	Pig	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	involved_in	IBA	PANTHER:PTN000337405\|SGD:S000001497	150520179		GO_Central	GO_REF:0000033
URB1	Pig	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	involved_in	IBA	PANTHER:PTN000337405\|SGD:S000001497	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
URB1	Pig	fibrillar center	located_in	IEA	UniProtKB:O60287\|ensembl:ENSP00000372199	150520179		Ensembl	GO_REF:0000107
URB1	Pig	nucleolus	is_active_in	IBA	PANTHER:PTN000337405\|SGD:S000001497\|UniProtKB:O60287	150520179		GO_Central	GO_REF:0000033
URB1	Pig	nucleolus	located_in	IEA	UniProtKB:O60287\|ensembl:ENSP00000372199	150520179		Ensembl	GO_REF:0000107

PMID:14681463	PMID:30032202

URB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	195,974,790 - 196,047,863 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	195,974,790 - 196,047,882 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

URB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	32,311,018 - 32,393,012 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	32,311,018 - 32,393,012 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	33,683,329 - 33,765,321 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	33,683,330 - 33,765,312 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	21	18,866,931 - 18,948,939 (-)	NCBI		Celera
Cytogenetic Map	21	q22.11	NCBI
HuRef	21	19,092,100 - 19,174,182 (-)	NCBI		HuRef
CHM1_1	21	33,245,146 - 33,327,161 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	21	30,680,775 - 30,762,860 (-)	NCBI		T2T-CHM13v2.0

Urb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	90,548,415 - 90,607,312 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	90,548,415 - 90,607,301 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	90,751,527 - 90,810,467 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	90,751,527 - 90,810,413 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	90,751,772 - 90,810,658 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	90,640,386 - 90,699,251 (-)	NCBI		MGSCv36	mm8
Celera	16	91,832,957 - 91,891,665 (-)	NCBI		Celera
Cytogenetic Map	16	C3.3	NCBI
cM Map	16	51.92	NCBI

Urb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	43,490,633 - 43,551,398 (-)	NCBI		GRCr8
mRatBN7.2	11	30,004,539 - 30,065,315 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	30,004,539 - 30,065,363 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	38,690,104 - 38,750,824 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	31,361,515 - 31,422,227 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	30,536,196 - 30,596,923 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	30,916,740 - 30,977,423 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	30,916,730 - 30,977,483 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	34,528,215 - 34,588,898 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	30,732,790 - 30,793,473 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	30,738,941 - 30,818,441 (-)	NCBI
Celera	11	29,672,337 - 29,733,034 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

Urb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	31,848,012 - 31,915,362 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	31,849,103 - 31,915,457 (-)	NCBI	ChiLan1.0	ChiLan1.0

URB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	28,388,428 - 28,513,989 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	23,248,051 - 23,375,791 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	18,637,996 - 18,761,045 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	32,028,801 - 32,141,275 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	32,061,966 - 32,141,275 (-)	Ensembl	panpan1.1		panPan2

URB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	27,087,196 - 27,158,144 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	27,087,570 - 27,158,164 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	27,080,534 - 27,151,483 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	27,207,657 - 27,278,618 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	27,207,735 - 27,278,625 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	27,152,622 - 27,223,569 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	27,164,342 - 27,235,271 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	27,672,375 - 27,742,811 (-)	NCBI		UU_Cfam_GSD_1.0

Urb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	27,679,168 - 27,748,856 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	9,718,925 - 9,788,666 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	9,718,981 - 9,790,094 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

URB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	59,733,260 - 59,811,990 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	59,733,902 - 59,814,018 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	2,275,305 - 2,354,903 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Urb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	20,648,230 - 20,715,549 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	20,647,661 - 20,716,262 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in URB1
2821 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3


RefSeq Transcripts	XM_021069844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01102465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000065066 ⟹ ENSSSCP00000036505

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	195,974,790 - 196,047,863 (-)	Ensembl

RefSeq Acc Id:

XM_021069844 ⟹ XP_020925503

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	195,974,790 - 196,047,882 (-)	NCBI

Sequence:

show sequence

CTCCCGAGGCTCCGCCTCTTCCGACAGCCCCCCGCCCCTTCAGCCCACGTGTGGGCCACAGGTGCCTGTCGGGTCTCCCCCGGTGTCCTCTTGTCAGGTCCCGGGGTGTGTGGGTCCCGGCGCGTCCC
CGCCCTCTCGGCCATGGGGGTCCCCAAAAGGAAGGCTGCGGGCGGCCGGGAAGGTGGAGCTACCCCTGCGGGCGCAGCCAAGCGAGCCCGCACCGAAGAGCTCACGGGCGTGCGCTTCAAGACTCAGC
TGAGAGACGCGCAGGGTGCGGGGCCGGCCTTGGAAGCATTTGTTTCTGCTGCCAAGAAGCTACCTCGAGAGGATGTGTACGATGTCGTGGAGGGATACATCAAAATTTCTGTCGAGTGTGCCGAGATT
TTCCAGCTTCTGAGTGGGGAGAAGCGCCCTGAAAGTGAGATGCTATTAATATTTCAAGTTTTCGAGGCCATATTATTGCGGACGGCCAGTGATCTCTCCCATTTTCACGTGGTGGGAACCAACATCGT
GAAAAAGCTCATGAATAACCACATGAAGCTCCTCTGCGAGTCCCTGTATGCCTCGGGTTACAAGATGGCTCGCGCCTGCCTGAACCTGATGGCCGCCATGGTGACCCAGGGTCCCGAGGCCGCCAGGG
ACGTCTGCAGCCACTTTGATCTGAATAAAAAGACCTTGTACACCCTGGCGACCAAGAGGGATTCAAAGGGAGTGCATGACGTCCGGCTGGCCTACATTCAGTTCGCCCTTTCCTTCCTGATCGCCGGG
GACGACAGCACGATCGTGCAGGTGCTGGAGTTGAAAGAGTTTCTCCCTTGCATTTTTAGCTCAGGCATAAAGGAAGATAGGATTTCTACCATCAATATTTTGTTATCCACACTGAAAACAAAGGTGGT
TCACAATAAAAATATCACAAAAACCCAGAAGGTACGCTTCTTTACCGGGCAAGTGCTGACCCACATAGCGTCTCTCTACAACTGGAAGGGGATTGTCGACGTGAGCCCGGAGCATGTCGAGGCCTCTG
CTGAAGACGCAGGGAAGACCATGGTGAGGCAGCTGGTTCACAACTTCCTGATGGACCTCTGCTGTTCGCTCAAGCACGGGATTAATTTTTACGACGCGTCTCTCGGTACCGTGGGCAGAGGAGGAAAC
CTGACTCTCCTGCACTTCCTGTTGGGTTTGAAAACTGCAGCGGATGACGAGCTGGTCGCCGAACTCGTGGTGAACATCCTGAAAGTGTGCCCGGACCTCCTGAACAAGTATTTTAAGGAAGTGACGTT
TTCCTTTCTCCCAAGGGTGAAGTCCACCTGGTCAAACAATATCAAACTGCTCAACAAGATCTATGCCGCCCAGCCGGACATCTCCCGGGCCTTTCAGACCAGAGAGTTCATCCCCTTGCCGCGGCTCC
TGGCGATGGTGATGGTGACCACCGCGCCCCTGGTGTGCAGTAAGATCATGTTCACCCAGGCCTTGAACTTGGACAGCAAATCAGTGAAACACACAGCTCTGTCCCTCATTTCCGTCATTCTGAAGAGA
GCCCTGAAGACAATTGACNTATGCCTGGATAAAGAGGCCTGGCAGGAGTCGAGCGTGTACACGGCTGCTGCGATGGAGGACTTCGTGCGGCTCTTCAGAGAGGCCCTGAGCAAGATTTTACCCGACCT
GAACGCTGTCGTGTGGGTCTGGCAGTCACTCCGAAAGCAGGAGACGGAACAGGATGACGAGAAAGGGAAGAAAAAAGGCAGCAGGACTCCTGCCTGCGTGCTCCCCAGAGCGAGGCCCCCGGAGGGCG
GGGGCAGGCACTGCTCCATGTCCCCATTGTTCCGACAAGGACGCGAAAGCACAGGGAGACAGAGTAGCCATGACGCCGAAACCATTCTCCTGAAAGCTGCTCTGCTCCAGGTCATCTGTCTCTACCAG
CAGGTGGTCCCGCACGTGGTTATGCAGTATAACTTCGACTTCAGCAAGCTCCTGAAAGGTGTCATCTCCGAGGAGGGCCTTCGCCAGGAGGCGCCACCCATCCTGCAGCACCACATCCTGAAGGTGGC
ACTGGAACTGCCTGCCAGCAAGTTTCTGTGGTTAAAGGCCCAGGAAGGCCCAGATGCGGAAATCATTGGCGGAAAACGGTCCGTGTTTTACTTACTGATGAAAATGTTTGTGACCAGCAGCCACTTGC
ACCTCAAATCATCAACCAAACTTCTGATCGTGAAGATCCTGCGGGACACGGGCGTGTTTGAGCACACCTGGCAGGAGCTGGACCTGTGGCTGGAGCACTTGGATGACACGGCGGAGGAGAACAAGGAG
GCCGTGATTCAGTTCTTGGAGCGAGTGCTTCTGACATTGGTGGCAAATCCCTATTCGTACACGGACAAAGCCTCTGACTTTGTCCAGGAAGCCAGCACCCTGCAGGCCACCACGACAAAGCAGGACGC
CGATGACGTCAGCATTCCCATCTCCCACATTGACGATGTTCTCGACATGGTGGACGTCCTGGTGGAGGGCAGCGAAGGCTTGGATGAGGAGATCGGAGTCTCCCTGAGTGAAGACATGGTCCTGCTCA
CGTTCCCGTTCAGTGCGGTGGTCCCCGCAGCCCTGGAAGCCAGGAATAAGTTGCTCCTTGGGGCCGAAAATGAAGCAGGCGAAGGCGTCGTGGCGTACCTGACAGGCGTGCTGACGGACCTCCTCCAC
ACCCAGAGAGACCCGCTGGCCCTGTGTCTTCTGCTTCAGTCTTACGACAAGTTGGAGCCTCCGGTCCCGCCTTACTGCCGTCAGCTGGCCCAGTTCAACAGATACTACAGCCTCTGGATCCCGGAGCC
AGCCCGAGAGGCCCTGCCACTGCAGACGTCGGGCAGCCCAGCAACCCCAGTGCCCCCGGCCCCCTCCTTCTCCACCCTGCTGCAGTCGGCCTACGCGGGCCAGGGCGCGCTCCCACTCCTGGACGAGG
GGGTTCAGGCGCAGCTGCAGGCCGCCCTCCCACACCTCCCGATGCACCAGGCCCTGCGCTCGGCCAAGCACCTGCTGCTATACGTCCGGAGCACCGTGGAGAACTTCGGCCAGCTGGGTAGGAGTACA
GGGCCTCGCCTGCTGCAGCTCCTCCTGGACCTCCTCAGGCGCCTGCTCGTCCACTGTGAGCAGCTGGATGCCCAGAACCAGCAGCAGTGCCAGGCCGCCCAGGCCGAATCCGACCTCTTTTTGGATAT
GGAGTCCGTGGCCTCGTGGGATCTGGCCAATGACAAGACCCTGGAGCAGGTGCTCGTGGCCATCCTCAGACATCCCACGCTGGAGGCCTGGTTCCTGGCCCTGGAGCAGCAGGCCCTCCCTCCGCACA
CCCTCAGCCCCATCCTCGTGAAGCTCCTGGCGGCCCAGCTCAGCGCGGGGGTCCTGCCGCTACTGGTGGCGAGTGCCCCCATCCTCCGGAGCATCGGTCAGCTGGGCCTCCTGGCCAGGTACTCAGAG
GCCATCACCCAGAGCGTGCTCAGAGAGCTGCGGAACCGGAGGGCCAGCTCGGCCACACCGCCACCAAAGACCCTTCCCCAGCTGGAAGCCCTGCAGGCGCTGCATCCGTACATGGAGGGCACCCAGCT
CCGGGAGGTCACCCTGGCTCTGCTGAGCCTGCCTGAGGCCCACCTCGTAGCCCAGCGGCCCACCAAGTCCCCCAAGAAGGAGAGGCACCTGAGCGCTCTTGGGAAAACCCTGGTCCAGCTGCTGACCA
GCAGCCCTGAGGATCAGCTGCAGAGTGGCCAGCTCCTCTGGGCCTCTGAGTACATGAGAAGCCTGGGCGCTCTGCTGCCCACGCTGGCCGTGGATGAGCTGGACGCCGTGCTCCTCCACGCGCTGCAG
AGAGAGCCCGCACTGGCCCCCGTGCTCAGGGTTGACCTGCTGGACTACTGCCTGGCCCGGCGGACGCGGGCGGCCCTGGACGCCGTGGCGCTGCTCCTGCAGCACAGCTGTCCCCACCTGCTGTGGTT
TGAGAGCTGGTGCAGGCGGGCCGGCTCGGGGCCCTGCCTGCAGGAGGCCCTGGACGACTTCCTGCCCCTCATCCGTGTGTACCTTCAGTGCAGGACTCAGGGACCCTTCACGCGCCCCGCAGGAGTGT
CCTCGGCCGTCATTCCTGTCCTGAGGAAGGCCCTGTGGAGGCCGCTGCAGACCAGGCTTCTCAGGGCTGATGGGCCCCCAGAGTCGGGGCTGCATCAGGAGATCCTGGCCCAGCTGGTCCCATTTGCA
AGAGCCAAGGGCCTCCATGTCCTCATGGACCGCTTGCCCAGCTTGCTCCAAGCTCCAGACTGTCACAAGAGCTGGGTCGTGGCCGACGCCATCTCGGCCGTTCTGGAAGGGTCGGCAGAAGAGCTGCG
TGACTGGAAGAAGACTCTGCTTGAGGTCTGCGTACAGTGGCTGGTGGCGTCCTTCGGTGGCAGCCAGCACGGCGATGGTACCCAGGACCAAGAGAAGCAGATGCTGTTGAGATTAAACGAACTGTTGA
ATTCACTTAATGAAGTTGATCCTGGTGCCTGGCAGAAATTTGTGAAGACTGGGCTCAAATTTCGGTATCAGGACTGTGCCTTTCTAAAGGCCCTCTGTGCCGCCGTGGAGCGCCTGTATCTCCCGGGA
AGCTCCGTGCGCCCGCAGCTCACCCAGCTCCGAGTAATCCACATGATGCTCACGCAGCACTCCCTGTTCCTGCCGACTCTGCTGAGGACCGGCGAGGAGGGCAGCCCCGACAGTCCTGTGAGAGAAGC
GCTGGTGGACCTGATGTCCTTGCTGGTGAGGCTGTGCCCCTCTGTCTGCGAGAACAGCCACTTCGCGGTGCTCCTCGGGGCCTACGGCGCCTCGCTCAGCGTCCTGGACCAGAAGATTTTACTTCTCC
TCCGGGCGTATGAACGGAACAACCTCAGCCTCATCAACTTCAGGGTGCTGCTGTGGGGCCCCGCGGCCGTGGAGCATCACAAGACGTGCCGGAGCCTGGGCACGTCGCTGTGGAAGCAGCCGAGCGTC
GGGGACATCCTCCGCCTGCTGGACCGGGACCGCGTGATGAGGACCGTCCTCCACTTCCCCCAGAAGCGGAGGCTGCTGCCCCCCGAGGACGCACAGGAACCCATTTTCAAAGACAGGAGCACAGTGGA
CCTCAGTGACCTCTACGACCCCTGTTTTCTCCTTCATCTCTTCAGTGAATTGACCAGGCCAGAATTTGTGGTGGATTGTCGCAAATTTGTGGATTCAAATGCCCTGGGCCTAACGGTCACGGCCCTCA
GCAGCTACGACCCCCAGATGCGAGCCGCGGCCTACTCCGTCCTGGCGGCCTACTACTCCCACGTGGAGGGGGCGCGGTTCCGGGAGCAGTCCCAGGTGCTGTACCTGCTGGACGTGGTCCGGAACGGG
ATCCGAACTCCGAACATGAGACTCACCTTCACCTTGACGCTCTTCATTGCCAAGGCAGCCTTGCAGATTTTGAAACCAGAGGAGCACATGTACTTGAAGGTGAACAAGTTCCTGCTGTCCCACGAGAA
CCTGAACATGAACAAGGTTCCAGGCTTCTACCAGTTCTTCTACAGCTCGGACTTCGAGCAAAAGACGGAACAGGAGTGGGTGTTTGGGATTCTGCGCCAGGGGATGCGGGACAAGCACTGCTACGAGC
TCTGCGCCAGGCGGGGCGTCCTCCACGTCGTCCTGTCCTTCTTCAGCAGCCCGCTGTGCGACGACACGGCCAGGAATTGGATTTTGGAAATTCTGCAGAGTGCCGCCCGGGATGCCAAATCTGCCTAT
GAGATCCTGCGGGACTACAGCCTCTTAACGTGGATTCTGCACATCCTCGAGAGCAAGTTTCTGGAGACTCAGCTGCTCTGCAACGTCATCTCCCTGCTGCACACGCTGTGGGTGACCAACCTGGGGGA
CAAAGGAGAGGAGGTGGGGGAGCAGCCTCCTTGCACGCTTGGGTCCCAGGAGCCCCCGAAGCTGCTGGCCCTGCACATGGTCAACGAGTTCCTCTACGTTCTCCTTGCACTCACGAAGCACCTGAGGC
CCACCCTGGCCTCGGCCCAGCTGGCCGACTTCTTCGGGGCGCTGGACTCCGTGCTGAGGTACCGGGCCACCGTTCTGCAGGCCTTCAAGGCCATGAACCGCTTCACCGTGAACGAGACCGTGCTGTCC
ACCAGGGATGTCCTCGTCCTCCTGCACAAGTGGAGCCTCATCGAGAAGGATGTCCGGCTCCAGGAGGACCTGAGAGCTACCGCGGAGAAGCACCAAGTCAGGGAGCTGCTGAAAATGCTCAAGGAGAA
GAACAAGCCCGTCGTGCCAGCCCGAGCCAAAGGCCGGAAGAGGAGGCCCGGGGAGGTGGAGGAGGCAGCCGACCCCGAGCTGCCGGCGTCCACCTTGGAAGCGTGCAAGGGCCACGTGCGCTCCATCC
TGACCCACTGGGGCCCGGCCTTCCCCGGCCCGGGATCCGAGAGCGAGGCCGCGGGCCCCGTGTGCGCCGTCACCTCCCTGGTGGCCGTCTGGCTGCTGCGCTCGGCGGCCCAGAGCCCGCCCAGCGGA
GCCGAGACCGCGGGCCTCCTGCGCTGGCTGCGGAGCCACGTGCTGCCGCGGCCGGCCGTCGCGGGCCACCTCCTCGGGGATGACTCCGTGCGGAGCGGCCTCTTTAGGCTGTACAGCCGGCTGGGCGG
CGCCCAGGGGCCGGCGGGGCCCGAGCAGAGCGTGGCCTGCCTGTTCAACGAGGTCATGCTGCAGCTGGTGGCCGCCCGGGGCCCTGTGGGGACCCCCCTGCAGCTGGCGGTGGAGGCCCTGCACCGCT
CTTCTCTGCACGAGGAGGATGAGGCCGAGCGAGCCACCGCAGCATTCCTGGTGTCGCTGTACATTAAGGACATCTGGCTGGGGGCCCAGCGCCCTGAGAGCCTCTTGACCCACGTCCGGATGGTCCTC
GATGCCACAGAGGACCGGCAGGCTGGTGACGAGGAGCCCATCATCAGGCTCTGCAGGGACCTCACCGCGGCCGCCCCCGACGCTTGACCCCCTGCCAGCCTGCTCCTCTGGCTCCAGGTTGTAGGAGT
TGGGTTGAGTCACGGAGGCCCTGCGAGATGATGAGCTCTGTGTATTGACTGGGTGTCCTGACCAGAAAAGTCGGCTCAAGGGACCGTGTGTGAGAAGTGGTCAGAGTTACAGTGGGTTGGGGACCTTC
GAGCCCTGAGCCCCGCTCAGGGAAGACCCTTCCTCTTAGAGGTTCACTGTTCCTCAGAAAAATACCTCAAATTGAGGTAGCACTTCTGAGCGCTTAAGGGATTCATGGATACTAAAGCTGCAATGTTG
AAAAATCTATCAGAGATGTTTCAGGTTTTCTTTTTATAAGAAGTCCTAGCTAAGCTTCGTGTAACTTTTTAAAGAAATAAGCCCTGCCAGTATTGTGTTAATTATTTTCTTAAATAAAAGGATGTTAA
CACTGAATCCTTAAAGTATAAAACTGTTTTGACTTCTGCTTTGGAAAGACAGCCTGTATTTTCTAAAATTGTGTTTCAAAAAGGGGATTGTAAATTTCATAACTCATTAATAAATGTCTATTTTTCTT
AGG

hide sequence


Protein RefSeqs	XP_020925503	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000036505
	ENSSSCP00000036505.2

RefSeq Acc Id:

XP_020925503 ⟸ XM_021069844

- UniProtKB:

A0A286ZYB9 (UniProtKB/TrEMBL), A0A481AZV5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGVPKRKAAGGREGGATPAGAAKRARTEELTGVRFKTQLRDAQGAGPALEAFVSAAKKLPREDVYDVVEGYIKISVECAEIFQLLSGEKRPESEMLLIFQVFEAILLRTASDLSHFHVVGTNIVKKLM
NNHMKLLCESLYASGYKMARACLNLMAAMVTQGPEAARDVCSHFDLNKKTLYTLATKRDSKGVHDVRLAYIQFALSFLIAGDDSTIVQVLELKEFLPCIFSSGIKEDRISTINILLSTLKTKVVHNKN
ITKTQKVRFFTGQVLTHIASLYNWKGIVDVSPEHVEASAEDAGKTMVRQLVHNFLMDLCCSLKHGINFYDASLGTVGRGGNLTLLHFLLGLKTAADDELVAELVVNILKVCPDLLNKYFKEVTFSFLP
RVKSTWSNNIKLLNKIYAAQPDISRAFQTREFIPLPRLLAMVMVTTAPLVCSKIMFTQALNLDSKSVKHTALSLISVILKRALKTIDXCLDKEAWQESSVYTAAAMEDFVRLFREALSKILPDLNAVV
WVWQSLRKQETEQDDEKGKKKGSRTPACVLPRARPPEGGGRHCSMSPLFRQGRESTGRQSSHDAETILLKAALLQVICLYQQVVPHVVMQYNFDFSKLLKGVISEEGLRQEAPPILQHHILKVALELP
ASKFLWLKAQEGPDAEIIGGKRSVFYLLMKMFVTSSHLHLKSSTKLLIVKILRDTGVFEHTWQELDLWLEHLDDTAEENKEAVIQFLERVLLTLVANPYSYTDKASDFVQEASTLQATTTKQDADDVS
IPISHIDDVLDMVDVLVEGSEGLDEEIGVSLSEDMVLLTFPFSAVVPAALEARNKLLLGAENEAGEGVVAYLTGVLTDLLHTQRDPLALCLLLQSYDKLEPPVPPYCRQLAQFNRYYSLWIPEPAREA
LPLQTSGSPATPVPPAPSFSTLLQSAYAGQGALPLLDEGVQAQLQAALPHLPMHQALRSAKHLLLYVRSTVENFGQLGRSTGPRLLQLLLDLLRRLLVHCEQLDAQNQQQCQAAQAESDLFLDMESVA
SWDLANDKTLEQVLVAILRHPTLEAWFLALEQQALPPHTLSPILVKLLAAQLSAGVLPLLVASAPILRSIGQLGLLARYSEAITQSVLRELRNRRASSATPPPKTLPQLEALQALHPYMEGTQLREVT
LALLSLPEAHLVAQRPTKSPKKERHLSALGKTLVQLLTSSPEDQLQSGQLLWASEYMRSLGALLPTLAVDELDAVLLHALQREPALAPVLRVDLLDYCLARRTRAALDAVALLLQHSCPHLLWFESWC
RRAGSGPCLQEALDDFLPLIRVYLQCRTQGPFTRPAGVSSAVIPVLRKALWRPLQTRLLRADGPPESGLHQEILAQLVPFARAKGLHVLMDRLPSLLQAPDCHKSWVVADAISAVLEGSAEELRDWKK
TLLEVCVQWLVASFGGSQHGDGTQDQEKQMLLRLNELLNSLNEVDPGAWQKFVKTGLKFRYQDCAFLKALCAAVERLYLPGSSVRPQLTQLRVIHMMLTQHSLFLPTLLRTGEEGSPDSPVREALVDL
MSLLVRLCPSVCENSHFAVLLGAYGASLSVLDQKILLLLRAYERNNLSLINFRVLLWGPAAVEHHKTCRSLGTSLWKQPSVGDILRLLDRDRVMRTVLHFPQKRRLLPPEDAQEPIFKDRSTVDLSDL
YDPCFLLHLFSELTRPEFVVDCRKFVDSNALGLTVTALSSYDPQMRAAAYSVLAAYYSHVEGARFREQSQVLYLLDVVRNGIRTPNMRLTFTLTLFIAKAALQILKPEEHMYLKVNKFLLSHENLNMN
KVPGFYQFFYSSDFEQKTEQEWVFGILRQGMRDKHCYELCARRGVLHVVLSFFSSPLCDDTARNWILEILQSAARDAKSAYEILRDYSLLTWILHILESKFLETQLLCNVISLLHTLWVTNLGDKGEE
VGEQPPCTLGSQEPPKLLALHMVNEFLYVLLALTKHLRPTLASAQLADFFGALDSVLRYRATVLQAFKAMNRFTVNETVLSTRDVLVLLHKWSLIEKDVRLQEDLRATAEKHQVRELLKMLKEKNKPV
VPARAKGRKRRPGEVEEAADPELPASTLEACKGHVRSILTHWGPAFPGPGSESEAAGPVCAVTSLVAVWLLRSAAQSPPSGAETAGLLRWLRSHVLPRPAVAGHLLGDDSVRSGLFRLYSRLGGAQGP
AGPEQSVACLFNEVMLQLVAARGPVGTPLQLAVEALHRSSLHEEDEAERATAAFLVSLYIKDIWLGAQRPESLLTHVRMVLDATEDRQAGDEEPIIRLCRDLTAAAPDA

hide sequence

Ensembl Acc Id:

ENSSSCP00000036505 ⟸ ENSSSCT00000065066

Protein Domains

Nucleolar pre-ribosomal-associated protein 1 C- Nucleolar pre-ribosomal-associated protein 1 N-

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000032024	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000065066	ENTREZGENE
	ENSSSCT00000065066.2	UniProtKB/TrEMBL
InterPro	ARM-type_fold	UniProtKB/TrEMBL
	NopRA1_C	UniProtKB/TrEMBL
	Npa1_N	UniProtKB/TrEMBL
	URB1	UniProtKB/TrEMBL
NCBI Gene	URB1	ENTREZGENE
PANTHER	NUCLEOLAR PRE-RIBOSOMAL-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
	PTHR13500	UniProtKB/TrEMBL
Pfam	NopRA1	UniProtKB/TrEMBL
	Npa1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A286ZYB9	ENTREZGENE, UniProtKB/TrEMBL
	A0A481AZV5	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:99817	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar