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Gene: SLC33A1 (solute carrier family 33 member 1) Sus scrofa

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Symbol:

SLC33A1

Name:

solute carrier family 33 member 1

RGD ID:

14278145

Description:

ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (inferred); protein homodimerization activity (inferred); INVOLVED IN acetyl-CoA transmembrane transport (inferred); ASSOCIATED WITH cataract (ortholog); Congenital Cataracts, Hearing Loss, and Neurodegeneration (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

acetyl-coenzyme A transporter 1; solute carrier family 33 (acetyl-CoA transporter), member 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	95,658,530 - 95,724,156 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	95,690,453 - 95,724,239 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	103,717,661 - 103,747,366 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cataract (ISO)

Congenital Cataracts, Hearing Loss, and Neurodegeneration (ISO)

Developmental Disabilities (ISO)

genetic disease (ISO)

Hearing Loss (ISO)

hereditary spastic paraplegia (ISO)

hereditary spastic paraplegia 10 (ISO)

hereditary spastic paraplegia 42 (ISO)

paraplegia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acetyl-CoA transmembrane transport (IEA)

Cellular Component

endoplasmic reticulum membrane (IEA)

membrane (IEA)

Molecular Function

acetyl-CoA transmembrane transporter activity (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLC33A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	95,658,530 - 95,724,156 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	95,690,453 - 95,724,239 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	103,717,661 - 103,747,366 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC33A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	155,821,024 - 155,854,427 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	155,821,024 - 155,854,456 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	155,538,813 - 155,572,216 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	157,028,065 - 157,054,861 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	157,028,072 - 157,054,869	NCBI
Celera	3	153,965,573 - 153,993,678 (-)	NCBI		Celera
Cytogenetic Map	3	q25.31	NCBI
HuRef	3	152,938,818 - 152,966,761 (-)	NCBI		HuRef
CHM1_1	3	155,507,626 - 155,535,526 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	158,595,660 - 158,629,057 (-)	NCBI		T2T-CHM13v2.0

Slc33a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	63,849,744 - 63,872,154 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	63,840,928 - 63,872,189 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	63,942,323 - 63,964,733 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	63,933,507 - 63,964,768 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	63,746,258 - 63,768,655 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	64,030,265 - 64,052,662 (-)	NCBI		MGSCv36	mm8
Celera	3	63,614,271 - 63,636,637 (-)	NCBI		Celera
Cytogenetic Map	3	E1	NCBI
cM Map	3	30.08	NCBI

Slc33a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	150,565,327 - 150,587,700 (-)	NCBI		GRCr8
mRatBN7.2	2	148,415,660 - 148,438,182 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	148,415,666 - 148,437,758 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	155,144,334 - 155,166,535 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	153,193,799 - 153,215,999 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	147,826,472 - 147,848,673 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	154,520,170 - 154,542,981 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	154,520,087 - 154,542,919 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	173,904,052 - 173,926,434 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	153,768,885 - 153,791,102 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	153,718,848 - 153,741,065 (-)	NCBI
Celera	2	142,691,385 - 142,713,443 (-)	NCBI		Celera
Cytogenetic Map	2	q31	NCBI

Slc33a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955448	6,885,153 - 6,905,631 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955448	6,885,153 - 6,905,641 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC33A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	153,741,581 - 153,769,681 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	153,746,314 - 153,774,411 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	152,882,563 - 152,910,434 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	160,933,257 - 160,961,723 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	160,933,258 - 160,961,723 (-)	Ensembl	panpan1.1		panPan2

SLC33A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	49,522,325 - 49,548,004 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	49,523,852 - 49,547,904 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	49,398,410 - 49,424,322 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	50,157,394 - 50,182,415 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	50,154,335 - 50,182,497 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	49,742,667 - 49,767,691 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	49,791,848 - 49,816,795 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	50,077,444 - 50,104,253 (-)	NCBI		UU_Cfam_GSD_1.0

Slc33a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	86,672,733 - 86,694,733 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936519	3,036,106 - 3,061,271 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936519	3,038,895 - 3,061,215 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC33A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	34,907,146 - 34,932,928 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	34,907,091 - 34,931,262 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	7,541,900 - 7,567,809 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc33a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	33,420,389 - 33,443,144 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	33,424,654 - 33,443,249 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC33A1
668 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001244245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005669929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021068489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK240382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK395793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK400803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU946828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU914328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP101890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GACC01000288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01053000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000027200 ⟹ ENSSSCP00000022310

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	95,693,057 - 95,724,156 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000028285 ⟹ ENSSSCP00000022359

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	95,658,530 - 95,724,153 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000045637 ⟹ ENSSSCP00000059170

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	95,658,997 - 95,724,153 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000083252 ⟹ ENSSSCP00000064557

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	95,693,057 - 95,723,934 (-)	Ensembl

RefSeq Acc Id:

NM_001244245 ⟹ NP_001231174

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	95,696,483 - 95,724,157 (-)	NCBI

Sequence:

show sequence

GTATCTCAGGAGTCCAGTGGAGAAAGTGCTGTCTGTCGCATTGGTGGCGGCGAGAGTGGGCGGT
GGGTCGGGGAATTGGCCGTTTCTCTCGCTACAGCTACAGGCCTGTTTCCATCGCAACACCACGG
CCCCCTCCTCCAGTCTCGACCCCGGCCCGGCTGCCGGGGGCGCTTCTTCAGGCTCCTTGACGCC
GCTCCAAGGAGAAAATACCTGGGCATCGCCTGGGCTTCCAGCCAGGGGACTGGCTCCGGGGTTC
AGCACTCCGGACGGCAGTAAGGAGTGCCCTTATCAACCCGCGCCCTGTCCCCCTCCCTGAGCCA
TTGACACCCTGGTCCAGAGCGACAGCCTTGGACCTGGGACTAGACGGATCCAAGACGCTCAGCC
CCGGCCTCCCACAAACGGGGTTCTGCATCGTCTCTGATATGTCTCCCACCATCTCCCACAAGGA
CAATAGTCGGCAACGACGGCCAGGGACTTTCAACCACTCTCTGGATATGAAGAGCGGTCCTCTA
CCGCCGGGCTCCTGGGATGATGATCATCCGGAGTTGGTGGGCGGGGAAGGGGACAAAGAAGCTC
TTCTGGGGGATATCGGCGCTAGTGACCTCTCAAAACCCCCAAGGAGCTGCCGGGCCGAATTAAG
CAGCATTTTGCTTTTGCTCTTTCTTTACGTGCTTCAGGGCATTCCACTGGGCCTGGCAGGAAGC
ATCCCACTTATTTTGCAGAGCAAAAATGTTAGCTATACAGATCAGGCTTTCTTCAGTTTTGTCT
TTTGGCCCTTCAGTCTCAAATTACTCTGGGCCCCGTTAGTTGATGCGGTTTACTTTAGGAACTT
CGGCCGTCGCAAATCTTGGCTTGTCCCTACACAGTACATATTGGGATTCTTCATGATATATCTA
TCCACTCAAGTGGACCACTTGCTCGGGAGTACAGATGGCAGAAGCCCCGATGTTGTTGCTCTCA
CTGTGACTTTCTTTTTGTTTGAATTCCTGGCAGCCACTCAGGACATCGCTGTGGATGGTTGGGC
GTTAACTATGTTATCCCGGGAAAATGTGGGTTATGCTTCTACTTGCAATTCAGTAGGCCAAACA
GCGGGCTATTTTTTGGGCAATGTTTTGTTTTTGGCCCTTGAATCTGCCGACTTTTGTAACAAAT
ATTTGCGGTTGCAGCCTCGACCCAGGGGAATCGTCACTCTTTCAGATTTCCTCTTTTTCTGGGG
GACTGTATTTTTGATAACAACCACTTTGGTTGCTCTTCTGAAAAAAGAAAACAAAGAAGTATTG
GTAGGAAAAGAAGAAACTCAAGGGATCACAGATACTTACAAGCTGCTTTTTTCAATTATAAAAA
TGCCTGCAGTTCTGACGTTTTGCCTTCTGATTCTAACTGCAAAGATTGGTTTTTCAGCAGCAGA
TGCAGTAACAGGACTGAAATTGGTAGAAGAGGGAGTGCCCAAAGAACATTTAGCCTTATTGGCA
GTTCCAATGGTTCCTTTGCAAATAATATTACCTCTGATTATCAGCAGATACACTGCAGGTCCCC
AGCCACTAAACATATTTTACAAAGCCATGCCCTACAGATTATTGCTCGGATTAGAATATGCTCT
GCTGGTTTGGTGGACTCCTAAAGTAGAACATCAAGGGGGATTCCCTATGTATTACTATGTCATA
GTGCTCCTGAGTTATGCATTACATCAGGTTACATTGTACAGCATGTATGTTTCCATAATGGCTT
TCAATGCAAAGGTTAGTGATCCACTTATTGGAGGAACATACATGACCCTTTTAAATACTGTGTC
CAACCTGGGAGGAAACTGGCCTTCTACAGTAGCTCTTTGGCTGGTAGATCCCCTCACGGTGAAA
GAATGTGTAGGAGCATCAAACCAGAATTGCCGAACACCTGATGCTGTTGAGCTTTGCAAAAAAC
TTGGTGGCTCTTGTGTTACAGCACTGGATGGTTATTATGTGGAGTCTGTTATTTGTGTTTTTAT
TGGATTTGGTTGGTGGTTTTTGCTTGGTCCAAAACTTAAAAAGTTACAGGATGAAGGACCATCT
TCATGGAAGTGCAAAAGAAGCAAGTAATGCATTCATTCACTACTGGACATTCTAGAAAG

hide sequence

RefSeq Acc Id:

XM_005669929 ⟹ XP_005669986

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	95,694,856 - 95,724,189 (-)	NCBI

Sequence:

show sequence

ACTTCCTGAAGCTCGAGGCAGGAAATTATCTTGTATCTCAGGAGTCCAGTGGAGAAAGTGCTGT
CTGTCGCATTGGTGGCGGCGAGAGCGGGCGGTGGGTCGGGGAATTGGCCGTTTCTCTCGCTACA
GCTACAGGCCTGTTTCCATCGCAGCACCACGGCCCCCTCCTCCAGTCTCGACCCCGGCCCGGCT
GCCGGGGGCGCTTCTTCAGGCTCCTTGACGCCGCTCCAAGGAGAAAATACCTGGGCATCGCCTG
GGCTTCCAGCCAGGGGACTGGCTCCGGGGTTCAGCACTCCGGACGGCAGTAAGGAGTGCCCTTA
TCAACCCGCGCCCTGTCCCCCTCCCTGAGCCATTGACACCCTGGTCCAGAGCGACAGCCTTGGA
CCTGGGACTAGACGGATCCAAGACGCTCAGCCCCGGCCTCCCACAAACGGGGTTCTGCATCGTC
TCTGATATGTCTCCCACCATCTCCCACAAGGACAATAGTCGGCAACGACGGCCAGGGACTTTCA
ACCACTCTCTGGATATGAAGAGCGGTCCTCTACCGCCGGGCTCCTGGGATGATGATCATCCGGA
GTTGGTGGGCGGGGAAGGGGACAAAGAAGCTCTTCTGGGGGATATCGGCGCTAGTGACCTCTCA
AAACCCCCAAGGAGCTGCCGGGCCGAATTAAGCAGCATTTTGCTTTTGCTCTTTCTTTACGTGC
TTCAGGGCATTCCACTGGGCCTGGCAGGAAGCATCCCACTTATTTTGCAGAGCAAAAATGTTAG
CTATACAGATCAGGCTTTCTTCAGTTTTGTCTTTTGGCCCTTCAGTCTCAAATTACTCTGGGCC
CCGTTAGTTGATGCGGTTTACTTTAGGAACTTCGGCCGTCGCAAATCTTGGCTTGTCCCTACAC
AGTACATATTGGGATTCTTCATGATATATCTATCCACTCAAGTGGACCACTTGCTCGGGAGTAC
AGATGGCAGAAGCCCCGATGTTGTTGCTCTCACTGTGACTTTCTTTTTGTTTGAATTCCTGGCA
GCCACTCAGGACATCGCTGTGGATGGTTGGGCGTTAACTATGTTATCCCGGGAAAATGTGGGTT
ATGCTTCTACTTGCAATTCAGTAGGCCAAACAGCGGGCTATTTTTTGGGCAATGTTTTGTTTTT
GGCCCTTGAATCTGCCGACTTTTGTAACAAATATTTGCGGTTGCAGCCTCGACCCAGGGGAATC
GTCACTCTTTCAGATTTCCTCTTTTTCTGGGGGACTGTATTTTTGATAACAACCACTTTGGTTG
CTCTTCTGAAAAAAGAAAACAAAGAAGTATTGGTAGGAAAAGAAGAAACTCAAGGGATCACAGA
TACTTACAAGCTGCTTTTTTCAATTATAAAAATGCCTGCAGTTCTGACGTTTTGCCTTCTGATT
CTAACTGCAAAGATTGGTTTTTCAGCAGCAGATGCAGTAACAGGACTGAAATTGGTAGAAGAGG
GAGTGCCCAAAGAACATTTAGCCTTATTGGCAGTTCCAATGGTTCCTTTGCAAATAATATTACC
TCTGATTATCAGCAGATACACTGCAGGTCCCCAGCCACTAAACATATTTTACAAAGCCATGCCC
TACAGATTATTGCTCGGATTAGAATATGCTCTGCTGGTTTGGTGGACTCCTAAAGTAGAACATC
AAGGGGGATTCCCTATGTATTACTATGTCATAGTGCTCCTGAGTTATGCATTACATCAGGTTAC
ATTGTACAGCATGTATGTTTCCATAATGGCTTTCAATGCAAAGGTTAGTGATCCACTTATTGGA
GGAACATACATGACCCTTTTAAATACTGTGTCCAACCTGGGAGGAAACTGGCCTTCTACAGTAG
CTCTTTGGCTGGTAGATCCCCTCACGGTGAAAGAATGTGTAGGAGCATCAAACCAGAATTGCCG
AACACCTGATGCTGTTGAGCTTTGCAAAAAACTTGGTGGCTCTTGTGTTACAGCACTGGATGGT
TATTATGTGGAGTCTGTTATTTGTGTTTTTATTGGATTTGGTTGGTGGTTTTTGCTTGGTCCAA
AACTTAAAAAGTTACAGGATGAAGGACCATCTTCATGGAAGTGCAAAAGAAGCAAGTAATGCAT
TCATTCACTACTGGACATTCTAGAAAGATTGGTTAAATTCTATGGGGAATTTGCTGAGAAGAGA
ATGTAAACTACTGAAAGGTCATTTTCATTGTTATTTTTCTGATCACAACTACATTGTACTAATG
AATCTGTGTTAAAAGACTATTTTAAATGTATTTCCTGCTTTTGTAAGCATTTAAGATTTATAAG
AAGATTATTCAAACTATTTTTTATAAAATAAAAGCTATGACTTTTAATTTATTGATTCCCCTTC
CCACCCCCCTTTTTTGGAAGATATTTTGATTCCTTGTTAAATTTTACCCTAAAGCTTACATATG
TTTTTTGTTGTTAAGTGCTTCATGGCACATGGACAGCTCATGAAGGGGTCACATTTAATGTTGT
ATGTATGTTTATGGCAAACTTTTGAAAATAAAAGTTAAATGTTTTTGTTTTAGTAGTTTTTTTT
ATTACTGAGAGAAAAAACAGTAAAACTTACTGATTAAGTAAAATTTAAATGAGTAATACTATAA
TTTTAGAAACTAATGCTTTAAAGAGGAGAAAGACATTTTGTGCCATTGACAAATTATATGGTGG
AAAAAGTTTTCTTAATTAAGCACTTCACTAATGAGAAAAGATCTCACAATTACTTTATACCAAA
TCAGGTACTATTTTTCCACTTATTAAAATATAGTCTTTTGTTTGTAAACGATAGTTTCTACTGG
AGAATCACTAACCCAGGAGAATTAATTTTTTGAATATTTTAGCAGTTTTCAATATATTATGTGT
ACCTGGTAGTGAGATTTCTTGCATGTTTTGTGTTGTATAGTACTCTGACTTTTTACAGAGATTA
CATAAATCTTTAAACGTTAAAGGAAAAGAGATTAAGTTGACTTTTTATTTAATAATTCTCTTTG
TGGGAAAATACATACTAATGCCTGATTTTGTTAATTTTATAGCATAGGTTGAATTTTAGAGAGG
GATTTTTATAAGTAATGGAGGATAAAATGGTGGTAGAAAATGGCACTCAGCATCTGAAGAAAGA
TAGAGGCAGTGGCTTCTAGAACTCATACATTGCCAATGGAAAGCCTGTGTTGGGCATTGATGTC
AGATCCAGAAGTATCATCTGGAAAAATCATCCTAGAAACACATCAAACCATAGACCACAGTACT
TTGTCACAGGAATTGTCCATTCTCATGTATTATAATAAAAATGTTTACTTGAATAAATAAAA

hide sequence

RefSeq Acc Id:

XM_021068489 ⟹ XP_020924148

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	95,690,453 - 95,724,239 (-)	NCBI

Sequence:

show sequence

TGATTGGCTTGCTCTGGAGGCGGGATCAGGACGCATTTGAGACTAGGACCACTTCCTGAAGCTC
GAGGCAGGAAATTATCTTGTATCTCAGGAGTCCAGTGGAGAAAGTGCTGTCTGTCGCATTGGTG
GCGGCGAGAGCGGGCGGTGGGTCGGGGAATTGGCCGTTTCTCTCGCTACAGCTACAGGCCTGTT
TCCATCGCAGCACCACGGCCCCCTCCTCCAGTCTCGACCCCGGCCCGGCTGCCGGGGGCGCTTC
TTCAGGCTCCTTGACGCCGCTCCAAGGAGAAAATACCTGGGCATCGCCTGGGCTTCCAGCCAGG
GGACTGGCTCCGGGGTTCAGCACTCCGGACGGCAGTAAGGAGTGCCCTTATCAACCCGCGCCCT
GTCCCCCTCCCTGAGCCATTGACACCCTGGTCCAGAGCGACAGCCTTGGACCTGGGACTAGACG
GATCCAAGACGCTCAGCCCCGGCCTCCCACAAACGGGGTTCTGCATCGTCTCTGATATGTCTCC
CACCATCTCCCACAAGGACAATAGTCGGCAACGACGGCCAGGGACTTTCAACCACTCTCTGGAT
ATGAAGAGCGGTCCTCTACCGCCGGGCTCCTGGGATGATGATCATCCGGAGTTGGTGGGCGGGG
AAGGGGACAAAGAAGCTCTTCTGGGGGATATCGGCGCTAGTGACCTCTCAAAACCCCCAAGGAG
CTGCCGGGCCGAATTAAGCAGCATTTTGCTTTTGCTCTTTCTTTACGTGCTTCAGGGCATTCCA
CTGGGCCTGGCAGGAAGCATCCCACTTATTTTGCAGAGCAAAAATGTTAGCTATACAGATCAGG
CTTTCTTCAGTTTTGTCTTTTGGCCCTTCAGTCTCAAATTACTCTGGGCCCCGTTAGTTGATGC
GGTTTACTTTAGGAACTTCGGCCGTCGCAAATCTTGGCTTGTCCCTACACAGTACATATTGGGA
TTCTTCATGATATATCTATCCACTCAAGTGGACCACTTGCTCGGGAGTACAGATGGCAGAAGCC
CCGATGTTGTTGCTCTCACTGTGACTTTCTTTTTGTTTGAATTCCTGGCAGCCACTCAGGACAT
CGCTGTGGATGGTTGGGCGTTAACTATGTTATCCCGGGAAAATGTGGGTTATGCTTCTACTTGC
AATTCAGTAGGCCAAACAGCGGGCTATTTTTTGGGCAATGTTTTGTTTTTGGCCCTTGAATCTG
CCGACTTTTGTAACAAATATTTGCGGTTGCAGCCTCGACCCAGGGGAATCGTCACTCTTTCAGA
TTTCCTCTTTTTCTGGGGGACTGTATTTTTGATAACAACCACTTTGGTTGCTCTTCTGAAAAAA
GAAAACAAAGAAGTATTGGTAGGAAAAGAAGAAACTCAAGGGATCACAGATACTTACAAGCTGC
TTTTTTCAATTATAAAAATGCCTGCAGTTCTGACGTTTTGCCTTCTGATTCTAACTGCAAAGAT
TGGTTTTTCAGCAGCAGATGCAGTAACAGGACTGAAATTGGTAGAAGAGGGAGTGCCCAAAGAA
CATTTAGCCTTATTGGCAGTTCCAATGGTTCCTTTGCAAATAATATTACCTCTGATTATCAGCA
GATACACTGCAGGTCCCCAGCCACTAAACATATTTTACAAAGCCATGCCCTACAGATTATTGCT
CGGATTAGAATATGCTCTGCTGGTTTGGTGGACTCCTAAAGTAGAACATCAAGGGGGATTCCCT
ATGTATTACTATGTCATAGTGCTCCTGAGTTATGCATTACATCAGGTTACATTGTACAGCATGT
ATGTTTCCATAATGGCTTTCAATGCAAAGGTTAGTGATCCACTTATTGGAGGAACATACATGAC
CCTTTTAAATACTGTGTCCAACCTGGGAGGAAACTGGCCTTCTACAGTAGCTCTTTGGCTGGTA
GATCCCCTCACGGTGAAAGAATGTGTAGGAGCATCAAACCAGAATTGCCGAACACCTGATGCTG
TTGAGCTTTGCAAAAAACTTGGTGGCTCTTGTGTTACAGCACTGGATGGTTATTATGTGGAGTC
TGTTATTTGTGTTTTTATTGGATTTGGTTGGTGGTTTTTGCTTGGTCCAAAACTTAAAAAGTTA
CAGGATGAAGGACCATCTTCATGGAAGTGCAAAAGAAGCAAGTAATGCATTCATTCACTACTGG
ACATTCTAGAAAGAGGATTAAGGATCTGACATTGTCACTGCAGAAGCTGTGGTGTGGTTTGATC
CCTGGCCCAGGAATTTCCACATCCTGCGGATGCCGCAAAAAAAAAAAAAAAAAAGTGTGTTTGA
ATTAAATTCTCCAGATTTTATATAAATGCTCAGAACAGTTTTGCCTAACAGTCTCTAAAATAAT
AAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001231174	(Get FASTA)	NCBI Sequence Viewer
	XP_005669986	(Get FASTA)	NCBI Sequence Viewer
	XP_020924148	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000022310
	ENSSSCP00000022310.1
	ENSSSCP00000022359.3
	ENSSSCP00000064557.1
	ENSSSCP00015030589.1
	ENSSSCP00015030806.1
	ENSSSCP00015030829.1
	ENSSSCP00015030903.1
	ENSSSCP00025040564.1
	ENSSSCP00025040621.1
	ENSSSCP00025040712.1
	ENSSSCP00025040749.1
	ENSSSCP00025040790.1
	ENSSSCP00030035623.1
	ENSSSCP00030035631.1
	ENSSSCP00030035659.1
	ENSSSCP00030035671.1
	ENSSSCP00035016586.1
	ENSSSCP00035016590.1
	ENSSSCP00040038032.1
	ENSSSCP00040038074.1
	ENSSSCP00040038197.1
	ENSSSCP00040038249.1
	ENSSSCP00045012567.1
	ENSSSCP00045012621.1
	ENSSSCP00045012643.1
	ENSSSCP00045012663.1
	ENSSSCP00050019441.1
	ENSSSCP00050019448.1
	ENSSSCP00055037327.1
	ENSSSCP00055037409.1
	ENSSSCP00055037509.1
	ENSSSCP00055037594.1
	ENSSSCP00060020959.1
	ENSSSCP00060020962.1
	ENSSSCP00060020972.1
	ENSSSCP00060020973.1
	ENSSSCP00060020978.1
	ENSSSCP00065047308.1
	ENSSSCP00065047322.1
	ENSSSCP00070003531.1
	ENSSSCP00070003548.1
	ENSSSCP00070003557.1
	ENSSSCP00070003564.1
GenBank Protein	JAA74296	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_020924148 ⟸ XM_021068489
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1SNA5 (UniProtKB/TrEMBL), I3LE25 (UniProtKB/TrEMBL), A0A8D0K0W4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKP PRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPL VDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAAT QDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVT LSDFLFFWGTVFLITTTLVALLKKENKEVLVGKEETQGITDTYKLLFSIIKMPAVLTFCLLILT AKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISRYTAGPQPLNIFYKAMPYR LLLGLEYALLVWWTPKVEHQGGFPMYYYVIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGT YMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYY VESVICVFIGFGWWFLLGPKLKKLQDEGPSSWKCKRSK hide sequence

RefSeq Acc Id:	XP_005669986 ⟸ XM_005669929
- Peptide Label:	isoform X1
- UniProtKB:	I3LE25 (UniProtKB/TrEMBL), A0A4X1SNA5 (UniProtKB/TrEMBL), A0A8D0K0W4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKP PRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPL VDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAAT QDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVT LSDFLFFWGTVFLITTTLVALLKKENKEVLVGKEETQGITDTYKLLFSIIKMPAVLTFCLLILT AKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISRYTAGPQPLNIFYKAMPYR LLLGLEYALLVWWTPKVEHQGGFPMYYYVIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGT YMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYY VESVICVFIGFGWWFLLGPKLKKLQDEGPSSWKCKRSK hide sequence

RefSeq Acc Id:

NP_001231174 ⟸ NM_001244245

- UniProtKB:

I3LE25 (UniProtKB/TrEMBL), A0A4X1SNA5 (UniProtKB/TrEMBL), A0A8D0K0W4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKP
PRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPL
VDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAAT
QDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVT
LSDFLFFWGTVFLITTTLVALLKKENKEVLVGKEETQGITDTYKLLFSIIKMPAVLTFCLLILT
AKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISRYTAGPQPLNIFYKAMPYR
LLLGLEYALLVWWTPKVEHQGGFPMYYYVIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGT
YMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYY
VESVICVFIGFGWWFLLGPKLKKLQDEGPSSWKCKRSK

hide sequence

Ensembl Acc Id:

ENSSSCP00000064557 ⟸ ENSSSCT00000083252

Ensembl Acc Id:

ENSSSCP00000059170 ⟸ ENSSSCT00000045637

Ensembl Acc Id:

ENSSSCP00000022310 ⟸ ENSSSCT00000027200

Ensembl Acc Id:

ENSSSCP00000022359 ⟸ ENSSSCT00000028285

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000025316	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015057142	UniProtKB/TrEMBL
	ENSSSCG00025067292	UniProtKB/TrEMBL
	ENSSSCG00030055950	UniProtKB/TrEMBL
	ENSSSCG00035031381	UniProtKB/TrEMBL
	ENSSSCG00040063503	UniProtKB/TrEMBL
	ENSSSCG00045010731	UniProtKB/TrEMBL
	ENSSSCG00050034861	UniProtKB/TrEMBL
	ENSSSCG00055023793	UniProtKB/TrEMBL
	ENSSSCG00060036135	UniProtKB/TrEMBL
	ENSSSCG00065076936	UniProtKB/TrEMBL
	ENSSSCG00070002301	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000027200	ENTREZGENE
	ENSSSCT00000027200.3	UniProtKB/TrEMBL
	ENSSSCT00000028285.4	UniProtKB/TrEMBL
	ENSSSCT00000083252.2	UniProtKB/TrEMBL
	ENSSSCT00015076170.1	UniProtKB/TrEMBL
	ENSSSCT00015076648.1	UniProtKB/TrEMBL
	ENSSSCT00015076709.1	UniProtKB/TrEMBL
	ENSSSCT00015076860.1	UniProtKB/TrEMBL
	ENSSSCT00025092445.1	UniProtKB/TrEMBL
	ENSSSCT00025092559.1	UniProtKB/TrEMBL
	ENSSSCT00025092758.1	UniProtKB/TrEMBL
	ENSSSCT00025092859.1	UniProtKB/TrEMBL
	ENSSSCT00025092954.1	UniProtKB/TrEMBL
	ENSSSCT00030077978.1	UniProtKB/TrEMBL
	ENSSSCT00030077996.1	UniProtKB/TrEMBL
	ENSSSCT00030078048.1	UniProtKB/TrEMBL
	ENSSSCT00030078068.1	UniProtKB/TrEMBL
	ENSSSCT00035041532.1	UniProtKB/TrEMBL
	ENSSSCT00035041540.1	UniProtKB/TrEMBL
	ENSSSCT00040086692.1	UniProtKB/TrEMBL
	ENSSSCT00040086771.1	UniProtKB/TrEMBL
	ENSSSCT00040086999.1	UniProtKB/TrEMBL
	ENSSSCT00040087111.1	UniProtKB/TrEMBL
	ENSSSCT00045018233.1	UniProtKB/TrEMBL
	ENSSSCT00045018300.1	UniProtKB/TrEMBL
	ENSSSCT00045018329.1	UniProtKB/TrEMBL
	ENSSSCT00045018360.1	UniProtKB/TrEMBL
	ENSSSCT00050046878.1	UniProtKB/TrEMBL
	ENSSSCT00050046889.1	UniProtKB/TrEMBL
	ENSSSCT00055046812.1	UniProtKB/TrEMBL
	ENSSSCT00055046902.1	UniProtKB/TrEMBL
	ENSSSCT00055047023.1	UniProtKB/TrEMBL
	ENSSSCT00055047120.1	UniProtKB/TrEMBL
	ENSSSCT00060048962.1	UniProtKB/TrEMBL
	ENSSSCT00060048970.1	UniProtKB/TrEMBL
	ENSSSCT00060048992.1	UniProtKB/TrEMBL
	ENSSSCT00060048994.1	UniProtKB/TrEMBL
	ENSSSCT00060049002.1	UniProtKB/TrEMBL
	ENSSSCT00065106355.1	UniProtKB/TrEMBL
	ENSSSCT00065106386.1	UniProtKB/TrEMBL
	ENSSSCT00070004290.1	UniProtKB/TrEMBL
	ENSSSCT00070004310.1	UniProtKB/TrEMBL
	ENSSSCT00070004319.1	UniProtKB/TrEMBL
	ENSSSCT00070004327.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.20	UniProtKB/TrEMBL
	2.40.50.90	UniProtKB/TrEMBL
InterPro	AcetylCoA_trans_1-like	UniProtKB/TrEMBL
	AmpG_permease/AT-1	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
	SNase_OB-fold_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100625667	UniProtKB/TrEMBL
NCBI Gene	SLC33A1	ENTREZGENE
PANTHER	ACETYL-COENZYME A TRANSPORTER 1	UniProtKB/TrEMBL
	PROTEIN C3ORF33	UniProtKB/TrEMBL
	PTHR12778	UniProtKB/TrEMBL
	PTHR28434	UniProtKB/TrEMBL
Pfam	Acatn	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103473	UniProtKB/TrEMBL
	SSF50199	UniProtKB/TrEMBL
UniProt	A0A4X1SMA8_PIG	UniProtKB/TrEMBL
	A0A4X1SMD6_PIG	UniProtKB/TrEMBL
	A0A4X1SNA5	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SNH2_PIG	UniProtKB/TrEMBL
	A0A5G2QJB7_PIG	UniProtKB/TrEMBL
	A0A8D0K0W4	ENTREZGENE
	A0A8D0P9C7_PIG	UniProtKB/TrEMBL
	A0A8D1H163_PIG	UniProtKB/TrEMBL
	A0A8D1RJG1_PIG	UniProtKB/TrEMBL
	A0A8D1U9N9_PIG	UniProtKB/TrEMBL
	A0A8D1V9Y0_PIG	UniProtKB/TrEMBL
	I3LE25	ENTREZGENE, UniProtKB/TrEMBL
	I3LE73_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A287BRB0	UniProtKB/TrEMBL
VGNC ID	VGNC:103074	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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