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Gene: Slc33a1 (solute carrier family 33 member 1) Ictidomys tridecemlineatus

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Symbol:

Slc33a1

Name:

solute carrier family 33 member 1

RGD ID:

12525135

Description:

ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (inferred); protein homodimerization activity (inferred); INVOLVED IN acetyl-CoA transmembrane transport (inferred); ASSOCIATED WITH cataract (ortholog); Congenital Cataracts, Hearing Loss, and Neurodegeneration (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

acetyl-coenzyme A transporter 1; solute carrier family 33 member 1, transcript variant X1; solute carrier family 33 member 1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	86,672,733 - 86,694,733 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936519	3,036,106 - 3,061,271 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936519	3,038,895 - 3,061,215 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cataract (ISO)

Congenital Cataracts, Hearing Loss, and Neurodegeneration (ISO)

Developmental Disabilities (ISO)

genetic disease (ISO)

Hearing Loss (ISO)

hereditary spastic paraplegia (ISO)

hereditary spastic paraplegia 10 (ISO)

hereditary spastic paraplegia 42 (ISO)

paraplegia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acetyl-CoA transmembrane transport (IEA)

Cellular Component

endoplasmic reticulum membrane (IEA)

membrane (IEA)

Molecular Function

acetyl-CoA transmembrane transporter activity (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Slc33a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	86,672,733 - 86,694,733 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936519	3,036,106 - 3,061,271 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936519	3,038,895 - 3,061,215 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC33A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	155,821,024 - 155,854,427 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	155,821,024 - 155,854,456 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	155,538,813 - 155,572,216 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	157,028,065 - 157,054,861 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	157,028,072 - 157,054,869	NCBI
Celera	3	153,965,573 - 153,993,678 (-)	NCBI		Celera
Cytogenetic Map	3	q25.31	NCBI
HuRef	3	152,938,818 - 152,966,761 (-)	NCBI		HuRef
CHM1_1	3	155,507,626 - 155,535,526 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	158,595,660 - 158,629,057 (-)	NCBI		T2T-CHM13v2.0

Slc33a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	63,849,744 - 63,872,154 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	63,840,928 - 63,872,189 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	63,942,323 - 63,964,733 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	63,933,507 - 63,964,768 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	63,746,258 - 63,768,655 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	64,030,265 - 64,052,662 (-)	NCBI		MGSCv36	mm8
Celera	3	63,614,271 - 63,636,637 (-)	NCBI		Celera
Cytogenetic Map	3	E1	NCBI
cM Map	3	30.08	NCBI

Slc33a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	150,565,327 - 150,587,700 (-)	NCBI		GRCr8
mRatBN7.2	2	148,415,660 - 148,438,182 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	148,415,666 - 148,437,758 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	155,144,334 - 155,166,535 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	153,193,799 - 153,215,999 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	147,826,472 - 147,848,673 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	154,520,170 - 154,542,981 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	154,520,087 - 154,542,919 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	173,904,052 - 173,926,434 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	153,768,885 - 153,791,102 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	153,718,848 - 153,741,065 (-)	NCBI
Celera	2	142,691,385 - 142,713,443 (-)	NCBI		Celera
Cytogenetic Map	2	q31	NCBI

Slc33a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955448	6,885,153 - 6,905,631 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955448	6,885,153 - 6,905,641 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC33A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	153,741,581 - 153,769,681 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	153,746,314 - 153,774,411 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	152,882,563 - 152,910,434 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	160,933,257 - 160,961,723 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	160,933,258 - 160,961,723 (-)	Ensembl	panpan1.1		panPan2

SLC33A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	49,522,325 - 49,548,004 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	49,523,852 - 49,547,904 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	49,398,410 - 49,424,322 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	50,157,394 - 50,182,415 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	50,154,335 - 50,182,497 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	49,742,667 - 49,767,691 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	49,791,848 - 49,816,795 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	50,077,444 - 50,104,253 (-)	NCBI		UU_Cfam_GSD_1.0

SLC33A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	95,658,530 - 95,724,156 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	95,690,453 - 95,724,239 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	103,717,661 - 103,747,366 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC33A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	34,907,146 - 34,932,928 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	34,907,091 - 34,931,262 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	7,541,900 - 7,567,809 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc33a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	33,420,389 - 33,443,144 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	33,424,654 - 33,443,249 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005325697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021726625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000000095 ⟹ ENSSTOP00000000082

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936519	3,036,106 - 3,061,271 (-)	Ensembl

RefSeq Acc Id:

XM_005325697 ⟹ XP_005325754

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	86,672,739 - 86,694,733 (+)	NCBI
SpeTri2.0	NW_004936519	3,038,895 - 3,061,215 (-)	NCBI

Sequence:

show sequence

AGGGACCGCTTCCTGAAGCTTGAGGCAGGAAGTTATCTGTTCTTGGGAGTCCTGTGGAGAAAGT
CTTCTCTGCCGCACTGGTGACGGCAAGGGCTGGAAGTGGCGGGGTGCCGACCGTCTGTCCACAC
AGCACCACGGCCGCCTCCTCCAGCCCCGAGCCCGGTGCGGCCGCCCAGGGGGCTCCTCTGGGAT
CCCTGAAGCGGCTCCGAGGGGCGCGTCCCCAGGCGTCGGTGCCGGCTCGGGGACTGGCTGCGCT
CTTGAGCGATCGGGACCGCAGTGGGAAGGACCCCCGCCTCTCCTGGAAGCCCGAGGCCCGGGTC
CACAGCGCCCGCCTTGGACCTGGGACCCGACGGAGCCAACACGCTCAGCCCGGGCCCGCCGCAG
GCGGGGCTCTGCCTCGTCTCTGACATGTCGCCCACTCTCTCCCACAAGGACAACAGTCGGCAGC
GGCGGCCAGGGACTTTCAACCACACTCTGGACATGAAGAGCGGCCCCCTGCCGCCGGGCAGCTG
GGAGGACAGCCACCCGGCCTCAGCAGGCGGGGAGGGGGACCGGGAGGCCCTCCTGAGGGACCCC
AACCCCGTGGACTTCCCCAAAGCCCCGCGCGGCTGCCGGGCCGAGCTCAGCAGCATTTTGCTGC
TGCTGTTCCTCTACGTGCTCCAGGGCATTCCGCTGGGCCTGGCAGGCAGCATCCCGCTCATCCT
GCAGAGCAAAAACGTCAGCTACACGGACCAGGCCTTCTTCAGCTTCGTCTTTTGGCCCTTCAGT
CTCAAGTTGCTCTGGGCCCCGTTGGTGGACGCGGTCTACTTTAAGAACTTCGGTCGGCGCAAAT
CCTGGCTGGTCCCTACACAGTACATATTAGGACTCTTCATGATCTACTTGTCCACCCAGGTGGA
CCGTTTGCTCGGGAATACGGACGGTAGGACCCCCGACGTGGTCACTCTCACCGTGACGTTCTTT
TTGTTTGAATTCTTGGCCGCCACTCAGGACATCGCGGTGGATGGCTGGGCATTAACTATGTTAT
CCCGAGAAAACGTGGGCTATGCTTCCACCTGCAATTCCGTGGGCCAAACCGCTGGCTACTTTTT
GGGCAATGTTTTGTTTTTGGCCCTTGAATCAGCCGACTTTTGTAACAAATATTTGCGGTTTCAG
CCTCAACCAAGGGGAATTGTTACTCTTTCAGATTTTCTTTTTTTCTGGGGAACTATATTTTTAA
TAACGACGACATTAGTTGCCTTTCTGAAAAAAGAAAACAAAGAAGTATCGGTAGTAAAAGAAGA
AACACAAGGGATCACAGATACTTACAAGCTGCTTTTTACAATTATAAAAATGCCAGCAGTTCTG
ACATTTTGCCTTCTGATTCTAACTTCAAAGATTGGTTTTTCAGCAGCAGATGCAGTAACTGGAC
TGAAATTGGTAGAAGAGGGAGTACCCAAAGAACATTTAGCTCTACTGGCAGTTCCAATGGTTCC
TTTACAGATAATATTGCCTCTGATTATCAGCAAATATACTGCAGGTCCACAACCACTAAATGTA
TTTTACAAGGCCATGCCCTACAGATTGCTGCTAGGATTGGAGTATGCGCTCCTGGTGTGGTGGA
CTCCTAAAGTAGAGCACCAGGGAGGATTCCCTCTGTATTACTACGTCATAGTGCTGCTGAGTTA
CGCCTTACACCAGATTACATTGTACAGCATGTATGTTTCTATAATGGCTTTCAATGCAAAGGTT
AGTGATCCACTTATTGGAGGAACATACATGACCCTTTTAAACACTGTGTCCAATTTGGGAGGAA
ATTGGCCCTCTACAGTTGCTCTTTGGTTGGTGGATCCCCTCACAGTGAAAGAGTGTGTAGGAGC
ATCAAATCAGAATTGTCGAACACCTGATGCTGTTGAGCTTTGCAAAAAACTTGGCGGCTCATGT
GTTACAACCCTGGATGGTTATTATGTGGAATCCGTTATTTGTGTTCTTATTGGATTTGGTTGGT
GGTTCTTTCTTGGTCCAAAATTTAAAAAGTTACAGGATGAAGCACCATCTTCATGGAAGTGCAA
AAGAGGCAATTAATGCACATGCTATTGGACATTCTAGAAGGTAACCATAGTTTAGTTTTAATTC
AGAGAGCTATGATAATCAGTGCACAGGAGTATAAAATAATATTTTAAGCAAGGAAATTATTAAT
ATAAAATGCCAAATGTTGAAAAGTAGTAACTTTATGTATGATTATTTTTTTCCTTGTCTTTTCA
ATGTATTTAAAGTTTTCTTAAGGTCAGGAAATTGGTTGGGAAACAGCTACTCTGGCCTTTTTTA
TTTGATCTATGTCTTTTTAATTTACTGACCAAAGCATGTTTTAAACTACAATGCAGTAGTCTTC
GGTGGAAACCATGCAGTCAAGTATTGTTCTCAGTACCTGTCATTGAGCTGTATTTAAAACCACA
GTATAACATATTAGATGGAAGAGAACTTGGTATTCAGGTTCTAGCTACAATTAGTTTGATTTGT
TGGCAGTTAAAGTCTTACTTGGAATTATAAATTGGTTAAGTTTTATGTGGAATTTGCTGAGAAT
ATAGACTGCTGAAACATTATTTAATTTGGTTTTTTTTGTCCTTACCATATCCATATTGTTCAAA
TGAATCTGTGTTAAAAAGACTATTTTAAATGTATTTTCTGCTTTTGTAAGCATTAAAGATTTAT
AAGATTATTCAGACTATTTTTTATAAAATGAAAGCTATGATTTTTAATTTATTGATTTCTCCTG
TTCCTACCCTGATTTGGGGGGAAATATTTTGATTCCTTGTTAACTTTTACCCTAAAAATTAAAT
ATTTTTGTTTGTCACAAGTGCTTCAAGGCACACAGACAGCTATTGAGGGGATCAAGTTTAGTCT
TGTTTGTATGTTCATGGCAAAGTTTTGAAATAAAAATTAAATATTATTGTTCCAGTGTTTTTTT
TTTTTTAATTAGCAAGAGGGGGAAAGACAGTAAAACTTTACACTTAACTGAAATTTAAATGAGT
AATATGTTTTAAAGAGACAGAGACATTTTGTACCTTTGACAATGTGGTAGGAGAAAATTGAATG
TTTCTTAAGCACTTTACTAATAAAAAATATCTCATAATTACTTTATGCCAAATCAGGTACTGTA
TTTTCATTTATTAAAGTCTTATTTGTGCACTATAGTTACCAGTGGAGAGTTGCTATTCCAGAAG
AATTAAGCTCTAAGTACATTAGTGATTTCCAATCTATAATGTGCACCCAGTGATAAGGGTCTTT
GCATATTTCGTGTTGGGTTGATACTCTAACTCTTTAGAAATTACAAAATTTCTTTAAAGGTTAG
GGCAAATAGATTGGGTTATAAATCTTAATACTTTTATGTTAGTAGGAAAATATATACTAACTCC
TGATTTTGTTAATTTTATGACATAGGTTGAATTTTAGAAAGGGGTTTTTATAAGTAATGGAGGA
TAAACTGGGTGGGATAAAACAGCTCACGCTGAAGAAAGATGGGGCGGTGGCCTCTAGAATGCAT
GCATTGCCATTGGAAAGCCTGTATTGGGCATCACAGTCAGATCCTGAAGAATCACCCGGAAAAA
TACTCACCCTGGAGGCAAGAAGGCTACACAAAGCCATGGACTACAGACAGTACTTTGTGACATG
GTTGTCCATTATTATGTATTATAATCAAAATGTTTACTTGAATAAAGAAAAATCCACTTAACTA
TCACATGTGAAATGTATTTTAATTTTTAATTTGTGGATTAAGAAGCTCAGATTTCTTAATATTC
ATATTGTTTTACATACACACACTTTCATATATCTTTAATGACTTGAAGTTTTAAAACATCTTAA
ACCTTTATAAGGTGAAAGCCATTGATTGCATTTGTTCTAGAAATGAACAAAAAATTATTTTGAA
TTATAGTCTTGGATAATTTGGGTACATGTTTGTAACGTATACCAAAAATGATTCATTAATAGTC
ACATAACTATTAACAACTGTGTTGTGTACATTGATCACAAATAGCATTTTAAAATAAATGATCT
ACCTGAA

hide sequence

RefSeq Acc Id:

XM_021726625 ⟹ XP_021582300

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	86,672,738 - 86,694,733 (+)	NCBI
SpeTri2.0	NW_004936519	3,038,895 - 3,061,215 (-)	NCBI

Sequence:

show sequence

AGGGACCGCTTCCTGAAGCTTGAGGCAGGAAGTTATCTGTTCTTGGGAGTCCTGTGGAGAAAGT
CTTCTCTGCCGCACTGGTGACGGCAAGGGCTGGAAGTGGCGGGGTGCCGACCGTCTGTCCACAC
AGCACCACGGCCGCCTCCTCCAGCCCCGAGCCCGGTGCGGCCGCCCAGGGGGCTCCTCTGGGAT
CCCTGAAGCGGCTCCGAGGGGCGCGTCCCCAGGCGTCGGTGCCGGCTCGGGGACTGGCTGCGCT
CTTGAGCGATCGGGACCGCAGTGGGAAGGACCCCCGCCTCTCCTGGAAGCCCGAGGCCCGGGTC
CACAGCGCCCGCCTTGGACCTGGGACCCGACGGAGCCAACACGCTCAGCCCGGGCCCGCCGCAG
GCGGGGCTCTGCCTCGTCTCTGACATGTCGCCCACTCTCTCCCACAAGGACAACAGTCGGCAGC
GGCGGCCAGGGACTTTCAACCACACTCTGGACATGAAGAGCGGCCCCCTGCCGCCGGGCAGCTG
GGAGGACAGCCACCCGGCCTCAGCAGGCGGGGAGGGGGACCGGGAGGCCCTCCTGAGGGACCCC
AACCCCGTGGACTTCCCCAAAGCCCCGCGCGGCTGCCGGGCCGAGCTCAGCAGCATTTTGCTGC
TGCTGTTCCTCTACGTGCTCCAGGGCATTCCGCTGGGCCTGGCAGGCAGCATCCCGCTCATCCT
GCAGAGCAAAAACGTCAGCTACACGGACCAGGCCTTCTTCAGCTTCGTCTTTTGGCCCTTCAGT
CTCAAGTTGCTCTGGGCCCCGTTGGTGGACGCGGTCTACTTTAAGAACTTCGGTCGGCGCAAAT
CCTGGCTGGTCCCTACACAGTACATATTAGGACTCTTCATGATCTACTTGTCCACCCAGGTGGA
CCGTTTGCTCGGGAATACGGACGGTAGGACCCCCGACGTGGTCACTCTCACCGTGACGTTCTTT
TTGTTTGAATTCTTGGCCGCCACTCAGGACATCGCGGTGGATGGCTGGGCATTAACTATGTTAT
CCCGAGAAAACGTGGGCTATGCTTCCACCTGCAATTCCGTGGGCCAAACCGCTGGCTACTTTTT
GGGCAATGTTTTGTTTTTGGCCCTTGAATCAGCCGACTTTTGTAACAAATATTTGCGGTTTCAG
CCTCAACCAAGGGGAATTGTTACTCTTTCAGTTGCCTTTCTGAAAAAAGAAAACAAAGAAGTAT
CGGTAGTAAAAGAAGAAACACAAGGGATCACAGATACTTACAAGCTGCTTTTTACAATTATAAA
AATGCCAGCAGTTCTGACATTTTGCCTTCTGATTCTAACTTCAAAGATTGGTTTTTCAGCAGCA
GATGCAGTAACTGGACTGAAATTGGTAGAAGAGGGAGTACCCAAAGAACATTTAGCTCTACTGG
CAGTTCCAATGGTTCCTTTACAGATAATATTGCCTCTGATTATCAGCAAATATACTGCAGGTCC
ACAACCACTAAATGTATTTTACAAGGCCATGCCCTACAGATTGCTGCTAGGATTGGAGTATGCG
CTCCTGGTGTGGTGGACTCCTAAAGTAGAGCACCAGGGAGGATTCCCTCTGTATTACTACGTCA
TAGTGCTGCTGAGTTACGCCTTACACCAGATTACATTGTACAGCATGTATGTTTCTATAATGGC
TTTCAATGCAAAGGTTAGTGATCCACTTATTGGAGGAACATACATGACCCTTTTAAACACTGTG
TCCAATTTGGGAGGAAATTGGCCCTCTACAGTTGCTCTTTGGTTGGTGGATCCCCTCACAGTGA
AAGAGTGTGTAGGAGCATCAAATCAGAATTGTCGAACACCTGATGCTGTTGAGCTTTGCAAAAA
ACTTGGCGGCTCATGTGTTACAACCCTGGATGGTTATTATGTGGAATCCGTTATTTGTGTTCTT
ATTGGATTTGGTTGGTGGTTCTTTCTTGGTCCAAAATTTAAAAAGTTACAGGATGAAGCACCAT
CTTCATGGAAGTGCAAAAGAGGCAATTAATGCACATGCTATTGGACATTCTAGAAGGTAACCAT
AGTTTAGTTTTAATTCAGAGAGCTATGATAATCAGTGCACAGGAGTATAAAATAATATTTTAAG
CAAGGAAATTATTAATATAAAATGCCAAATGTTGAAAAGTAGTAACTTTATGTATGATTATTTT
TTTCCTTGTCTTTTCAATGTATTTAAAGTTTTCTTAAGGTCAGGAAATTGGTTGGGAAACAGCT
ACTCTGGCCTTTTTTATTTGATCTATGTCTTTTTAATTTACTGACCAAAGCATGTTTTAAACTA
CAATGCAGTAGTCTTCGGTGGAAACCATGCAGTCAAGTATTGTTCTCAGTACCTGTCATTGAGC
TGTATTTAAAACCACAGTATAACATATTAGATGGAAGAGAACTTGGTATTCAGGTTCTAGCTAC
AATTAGTTTGATTTGTTGGCAGTTAAAGTCTTACTTGGAATTATAAATTGGTTAAGTTTTATGT
GGAATTTGCTGAGAATATAGACTGCTGAAACATTATTTAATTTGGTTTTTTTTGTCCTTACCAT
ATCCATATTGTTCAAATGAATCTGTGTTAAAAAGACTATTTTAAATGTATTTTCTGCTTTTGTA
AGCATTAAAGATTTATAAGATTATTCAGACTATTTTTTATAAAATGAAAGCTATGATTTTTAAT
TTATTGATTTCTCCTGTTCCTACCCTGATTTGGGGGGAAATATTTTGATTCCTTGTTAACTTTT
ACCCTAAAAATTAAATATTTTTGTTTGTCACAAGTGCTTCAAGGCACACAGACAGCTATTGAGG
GGATCAAGTTTAGTCTTGTTTGTATGTTCATGGCAAAGTTTTGAAATAAAAATTAAATATTATT
GTTCCAGTGTTTTTTTTTTTTTAATTAGCAAGAGGGGGAAAGACAGTAAAACTTTACACTTAAC
TGAAATTTAAATGAGTAATATGTTTTAAAGAGACAGAGACATTTTGTACCTTTGACAATGTGGT
AGGAGAAAATTGAATGTTTCTTAAGCACTTTACTAATAAAAAATATCTCATAATTACTTTATGC
CAAATCAGGTACTGTATTTTCATTTATTAAAGTCTTATTTGTGCACTATAGTTACCAGTGGAGA
GTTGCTATTCCAGAAGAATTAAGCTCTAAGTACATTAGTGATTTCCAATCTATAATGTGCACCC
AGTGATAAGGGTCTTTGCATATTTCGTGTTGGGTTGATACTCTAACTCTTTAGAAATTACAAAA
TTTCTTTAAAGGTTAGGGCAAATAGATTGGGTTATAAATCTTAATACTTTTATGTTAGTAGGAA
AATATATACTAACTCCTGATTTTGTTAATTTTATGACATAGGTTGAATTTTAGAAAGGGGTTTT
TATAAGTAATGGAGGATAAACTGGGTGGGATAAAACAGCTCACGCTGAAGAAAGATGGGGCGGT
GGCCTCTAGAATGCATGCATTGCCATTGGAAAGCCTGTATTGGGCATCACAGTCAGATCCTGAA
GAATCACCCGGAAAAATACTCACCCTGGAGGCAAGAAGGCTACACAAAGCCATGGACTACAGAC
AGTACTTTGTGACATGGTTGTCCATTATTATGTATTATAATCAAAATGTTTACTTGAATAAAGA
AAAATCCACTTAACTATCACATGTGAAATGTATTTTAATTTTTAATTTGTGGATTAAGAAGCTC
AGATTTCTTAATATTCATATTGTTTTACATACACACACTTTCATATATCTTTAATGACTTGAAG
TTTTAAAACATCTTAAACCTTTATAAGGTGAAAGCCATTGATTGCATTTGTTCTAGAAATGAAC
AAAAAATTATTTTGAATTATAGTCTTGGATAATTTGGGTACATGTTTGTAACGTATACCAAAAA
TGATTCATTAATAGTCACATAACTATTAACAACTGTGTTGTGTACATTGATCACAAATAGCATT
TTAAAATAAATGATCTACCTGAA

hide sequence

RefSeq Acc Id:

XM_040269959 ⟹ XP_040125893

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	86,672,733 - 86,694,733 (+)	NCBI

RefSeq Acc Id:

XM_040269960 ⟹ XP_040125894

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	86,673,779 - 86,694,733 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005325754	(Get FASTA)	NCBI Sequence Viewer
	XP_021582300	(Get FASTA)	NCBI Sequence Viewer
	XP_040125893	(Get FASTA)	NCBI Sequence Viewer
	XP_040125894	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000000082.2
GenBank Protein	KAG3270852	(Get FASTA)	NCBI Sequence Viewer
	KAG3270853	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005325754 ⟸ XM_005325697
- Peptide Label:	isoform X1
- UniProtKB:	I3LVZ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPTLSHKDNSRQRRPGTFNHTLDMKSGPLPPGSWEDSHPASAGGEGDREALLRDPNPVDFPKA PRGCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPL VDAVYFKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDGRTPDVVTLTVTFFLFEFLAAT QDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVT LSDFLFFWGTIFLITTTLVAFLKKENKEVSVVKEETQGITDTYKLLFTIIKMPAVLTFCLLILT SKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNVFYKAMPYR LLLGLEYALLVWWTPKVEHQGGFPLYYYVIVLLSYALHQITLYSMYVSIMAFNAKVSDPLIGGT YMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTTLDGYY VESVICVLIGFGWWFFLGPKFKKLQDEAPSSWKCKRGN hide sequence

RefSeq Acc Id:

XP_021582300 ⟸ XM_021726625

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSPTLSHKDNSRQRRPGTFNHTLDMKSGPLPPGSWEDSHPASAGGEGDREALLRDPNPVDFPKA
PRGCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPL
VDAVYFKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDGRTPDVVTLTVTFFLFEFLAAT
QDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVT
LSVAFLKKENKEVSVVKEETQGITDTYKLLFTIIKMPAVLTFCLLILTSKIGFSAADAVTGLKL
VEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNVFYKAMPYRLLLGLEYALLVWWTPK
VEHQGGFPLYYYVIVLLSYALHQITLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWP
STVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTTLDGYYVESVICVLIGFGWWFF
LGPKFKKLQDEAPSSWKCKRGN

hide sequence

RefSeq Acc Id:	XP_040125893 ⟸ XM_040269959
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_040125894 ⟸ XM_040269960
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSSTOP00000000082 ⟸ ENSSTOT00000000095

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000000095	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000000095.3	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.20	UniProtKB/TrEMBL
InterPro	AcetylCoA_trans_1-like	UniProtKB/TrEMBL
	AmpG_permease/AT-1	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
NCBI Gene	Slc33a1	ENTREZGENE
PANTHER	ACETYL-COENZYME A TRANSPORTER 1	UniProtKB/TrEMBL
	PTHR12778	UniProtKB/TrEMBL
Pfam	Acatn	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103473	UniProtKB/TrEMBL
UniProt	I3LVZ0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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