NRG3 (neuregulin 3) - Rat Genome Database

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Gene: NRG3 (neuregulin 3) Sus scrofa
Analyze
Symbol: NRG3
Name: neuregulin 3
RGD ID: 14277284
Description: ENCODES a protein that exhibits chemorepellent activity (inferred); growth factor activity (inferred); receptor ligand activity (inferred); INVOLVED IN chemorepulsion involved in interneuron migration from the subpallium to the cortex (ortholog); intracellular signal transduction (ortholog); mammary gland development (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); schizophrenia (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: pro-neuregulin-3, membrane-bound isoform
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1483,317,019 - 84,402,943 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11483,316,962 - 84,405,347 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21490,842,758 - 91,108,804 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NRG3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1483,317,019 - 84,402,943 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11483,316,962 - 84,405,347 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21490,842,758 - 91,108,804 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRG3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381081,875,194 - 82,987,179 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1081,875,194 - 82,987,179 (+)EnsemblGRCh38hg38GRCh38
GRCh371083,634,950 - 84,746,935 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361083,625,077 - 84,735,341 (+)NCBINCBI36Build 36hg18NCBI36
Celera1077,630,757 - 78,742,147 (+)NCBICelera
Cytogenetic Map10q23.1NCBI
HuRef1077,483,814 - 78,594,633 (+)NCBIHuRef
CHM1_11083,917,602 - 85,028,760 (+)NCBICHM1_1
T2T-CHM13v2.01082,749,017 - 83,860,555 (+)NCBIT2T-CHM13v2.0
Nrg3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391438,086,093 - 39,195,045 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1438,090,909 - 39,195,045 (-)EnsemblGRCm39 Ensembl
GRCm381438,365,102 - 39,473,235 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1438,368,952 - 39,473,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv371439,182,137 - 40,286,376 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361437,282,204 - 38,384,967 (-)NCBIMGSCv36mm8
Celera1434,560,237 - 35,661,300 (-)NCBICelera
Cytogenetic Map14BNCBI
Nrg3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81614,256,540 - 15,374,107 (-)NCBIGRCr8
mRatBN7.21614,229,270 - 15,352,505 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1614,235,157 - 15,352,368 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01615,763,031 - 16,932,208 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1615,764,632 - 15,798,974 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01615,661,430 - 16,817,319 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41614,679,903 - 15,817,157 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1614,466,369 - 15,581,462 (-)NCBICelera
Cytogenetic Map16p14NCBI
Nrg3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555101,615,316 - 2,618,617 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555101,615,316 - 2,620,031 (+)NCBIChiLan1.0ChiLan1.0
NRG3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2893,833,755 - 94,981,643 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11093,839,076 - 94,986,963 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11081,862,024 - 82,974,743 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1081,862,036 - 82,973,334 (+)Ensemblpanpan1.1panPan2
NRG3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1430,515,845 - 31,557,598 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl430,515,890 - 31,556,152 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha430,570,501 - 31,546,936 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0430,834,334 - 31,875,634 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl430,834,349 - 31,874,016 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1430,699,630 - 31,739,836 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0430,896,586 - 31,931,272 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0431,385,545 - 32,426,952 (+)NCBIUU_Cfam_GSD_1.0
LOC101957192
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721349,019,288 - 50,047,975 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367161,362,574 - 2,391,432 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRG3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1948,846,287 - 49,957,238 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660489,110,091 - 10,240,887 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrg3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248414,219,084 - 5,285,240 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248414,213,089 - 5,285,255 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NRG3
27466 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
ectoderm
endocrine system
mesoderm
nervous system
reproductive system
1 23 3 1 23 4

Sequence


Ensembl Acc Id: ENSSSCT00000011324   ⟹   ENSSSCP00000011031
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1483,317,019 - 84,402,943 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000038750   ⟹   ENSSSCP00000031677
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1483,317,019 - 84,402,394 (+)Ensembl
RefSeq Acc Id: XM_001927008   ⟹   XP_001927043
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11483,316,962 - 84,405,347 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_001927043 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000011031.4
  ENSSSCP00000031677
  ENSSSCP00000031677.2
  ENSSSCP00070000908.1
RefSeq Acc Id: XP_001927043   ⟸   XM_001927008
- UniProtKB: A0A286ZJM1 (UniProtKB/TrEMBL),   A0A4X1SFD1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000011031   ⟸   ENSSSCT00000011324
Ensembl Acc Id: ENSSSCP00000031677   ⟸   ENSSSCT00000038750
Protein Domains
EGF-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000010344 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070000524 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000011324.4 UniProtKB/TrEMBL
  ENSSSCT00000038750 ENTREZGENE
  ENSSSCT00000038750.3 UniProtKB/TrEMBL
  ENSSSCT00070001033.1 UniProtKB/TrEMBL
Gene3D-CATH Laminin UniProtKB/TrEMBL
InterPro EGF-like_dom UniProtKB/TrEMBL
  Neuregulin UniProtKB/TrEMBL
NCBI Gene NRG3 ENTREZGENE
PANTHER PRO-NEUREGULIN-3, MEMBRANE-BOUND ISOFORM UniProtKB/TrEMBL
  PTHR11100 UniProtKB/TrEMBL
PROSITE EGF_1 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
Superfamily-SCOP EGF/Laminin UniProtKB/TrEMBL
UniProt A0A286ZJM1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SFD1 ENTREZGENE, UniProtKB/TrEMBL
  F1SEQ4_PIG UniProtKB/TrEMBL
VGNC ID VGNC:104011 ENTREZGENE