NRG3 (neuregulin 3) - Rat Genome Database

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Gene: NRG3 (neuregulin 3) Pan paniscus
Analyze
Symbol: NRG3
Name: neuregulin 3
RGD ID: 11756651
Description: ENCODES a protein that exhibits chemorepellent activity (inferred); growth factor activity (inferred); receptor ligand activity (inferred); INVOLVED IN chemorepulsion involved in interneuron migration from the subpallium to the cortex (ortholog); intracellular signal transduction (ortholog); mammary gland development (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); schizophrenia (ortholog); FOUND IN extracellular space (ortholog); glutamatergic synapse (ortholog); synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: pro-neuregulin-3, membrane-bound isoform
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2893,833,755 - 94,981,643 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11093,839,076 - 94,986,963 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11081,862,024 - 82,974,743 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1081,862,036 - 82,973,334 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NRG3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2893,833,755 - 94,981,643 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11093,839,076 - 94,986,963 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11081,862,024 - 82,974,743 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1081,862,036 - 82,973,334 (+)Ensemblpanpan1.1panPan2
NRG3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381081,875,194 - 82,987,179 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1081,875,194 - 82,987,179 (+)EnsemblGRCh38hg38GRCh38
GRCh371083,634,950 - 84,746,935 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361083,625,077 - 84,735,341 (+)NCBINCBI36Build 36hg18NCBI36
Celera1077,630,757 - 78,742,147 (+)NCBICelera
Cytogenetic Map10q23.1NCBI
HuRef1077,483,814 - 78,594,633 (+)NCBIHuRef
CHM1_11083,917,602 - 85,028,760 (+)NCBICHM1_1
T2T-CHM13v2.01082,749,017 - 83,860,555 (+)NCBIT2T-CHM13v2.0
Nrg3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391438,086,093 - 39,195,045 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1438,090,909 - 39,195,045 (-)EnsemblGRCm39 Ensembl
GRCm381438,365,102 - 39,473,235 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1438,368,952 - 39,473,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv371439,182,137 - 40,286,376 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361437,282,204 - 38,384,967 (-)NCBIMGSCv36mm8
Celera1434,560,237 - 35,661,300 (-)NCBICelera
Cytogenetic Map14BNCBI
Nrg3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81614,256,540 - 15,374,107 (-)NCBIGRCr8
mRatBN7.21614,229,270 - 15,352,505 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1614,235,157 - 15,352,368 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01615,763,031 - 16,932,208 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1615,764,632 - 15,798,974 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01615,661,430 - 16,817,319 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41614,679,903 - 15,817,157 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1614,466,369 - 15,581,462 (-)NCBICelera
Cytogenetic Map16p14NCBI
Nrg3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555101,615,316 - 2,618,617 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555101,615,316 - 2,620,031 (+)NCBIChiLan1.0ChiLan1.0
NRG3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1430,515,845 - 31,557,598 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl430,515,890 - 31,556,152 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha430,570,501 - 31,546,936 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0430,834,334 - 31,875,634 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl430,834,349 - 31,874,016 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1430,699,630 - 31,739,836 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0430,896,586 - 31,931,272 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0431,385,545 - 32,426,952 (+)NCBIUU_Cfam_GSD_1.0
LOC101957192
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721349,019,288 - 50,047,975 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367161,362,574 - 2,391,432 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRG3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1483,317,019 - 84,402,943 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11483,316,962 - 84,405,347 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21490,842,758 - 91,108,804 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRG3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1948,846,287 - 49,957,238 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660489,110,091 - 10,240,887 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrg3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248414,219,084 - 5,285,240 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248414,213,089 - 5,285,255 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008953559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034931007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055093079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055093080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_057298945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_057298946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_057298947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063607483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000043786   ⟹   ENSPPAP00000020987
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1081,862,036 - 82,973,334 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000043792   ⟹   ENSPPAP00000020993
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1081,862,036 - 82,973,334 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000043803   ⟹   ENSPPAP00000021004
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1081,864,645 - 82,973,334 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000043806   ⟹   ENSPPAP00000021007
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1081,864,645 - 82,973,334 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000043814   ⟹   ENSPPAP00000021015
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1082,939,183 - 82,973,334 (+)Ensembl
RefSeq Acc Id: XM_008953559   ⟹   XP_008951807
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,755 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,076 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBI
PanPan1.11081,862,024 - 82,974,743 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034930996   ⟹   XP_034786887
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,123 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,740 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034930997   ⟹   XP_034786888
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,124 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,741 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034930998   ⟹   XP_034786889
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,123 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,740 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034930999   ⟹   XP_034786890
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,124 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,741 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034931000   ⟹   XP_034786891
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,125 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,742 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034931003   ⟹   XP_034786894
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,124 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,741 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034931004   ⟹   XP_034786895
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,755 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,076 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034931005   ⟹   XP_034786896
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,755 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,076 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_034931006   ⟹   XP_034786897
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,128 - 94,956,032 (+)NCBI
Mhudiblu_PPA_v01078,267,744 - 79,384,895 (+)NCBI
RefSeq Acc Id: XM_055093079   ⟹   XP_054949054
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,980,569 (+)NCBI
NHGRI_mPanPan11093,839,123 - 94,985,898 (+)NCBI
RefSeq Acc Id: XM_055093080   ⟹   XP_054949055
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,981,643 (+)NCBI
NHGRI_mPanPan11093,839,123 - 94,986,963 (+)NCBI
RefSeq Acc Id: XM_057298945   ⟹   XP_057154928
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,124 - 94,956,032 (+)NCBI
RefSeq Acc Id: XM_057298946   ⟹   XP_057154929
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,950,712 (+)NCBI
NHGRI_mPanPan11093,839,125 - 94,956,032 (+)NCBI
RefSeq Acc Id: XM_057298947   ⟹   XP_057154930
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,755 - 94,385,608 (+)NCBI
NHGRI_mPanPan11093,839,076 - 94,390,929 (+)NCBI
RefSeq Acc Id: XM_063607483   ⟹   XP_063463553
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2893,833,802 - 94,965,467 (+)NCBI
RefSeq Acc Id: XP_008951807   ⟸   XM_008953559
- Peptide Label: isoform X9
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034786895   ⟸   XM_034931004
- Peptide Label: isoform X11
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786896   ⟸   XM_034931005
- Peptide Label: isoform X12
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786887   ⟸   XM_034930996
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786889   ⟸   XM_034930998
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786890   ⟸   XM_034930999
- Peptide Label: isoform X4
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786888   ⟸   XM_034930997
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786894   ⟸   XM_034931003
- Peptide Label: isoform X8
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786891   ⟸   XM_034931000
- Peptide Label: isoform X5
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034786897   ⟸   XM_034931006
- Peptide Label: isoform X13
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000021004   ⟸   ENSPPAT00000043803
Ensembl Acc Id: ENSPPAP00000021007   ⟸   ENSPPAT00000043806
Ensembl Acc Id: ENSPPAP00000021015   ⟸   ENSPPAT00000043814
Ensembl Acc Id: ENSPPAP00000020993   ⟸   ENSPPAT00000043792
Ensembl Acc Id: ENSPPAP00000020987   ⟸   ENSPPAT00000043786
RefSeq Acc Id: XP_054949055   ⟸   XM_055093080
- Peptide Label: isoform X15
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054949054   ⟸   XM_055093079
- Peptide Label: isoform X14
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_057154930   ⟸   XM_057298947
- Peptide Label: isoform X16
RefSeq Acc Id: XP_057154928   ⟸   XM_057298945
- Peptide Label: isoform X6
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_057154929   ⟸   XM_057298946
- Peptide Label: isoform X7
- UniProtKB: A0A2R9AUW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063463553   ⟸   XM_063607483
- Peptide Label: isoform X10
- UniProtKB: A0A2R9AUK1 (UniProtKB/TrEMBL)
Protein Domains
EGF-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033661 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000043786.1 UniProtKB/TrEMBL
  ENSPPAT00000043792.1 UniProtKB/TrEMBL
  ENSPPAT00000043803.1 UniProtKB/TrEMBL
  ENSPPAT00000043806.1 UniProtKB/TrEMBL
  ENSPPAT00000043814.1 UniProtKB/TrEMBL
Gene3D-CATH Laminin UniProtKB/TrEMBL
InterPro EGF-like_dom UniProtKB/TrEMBL
  Neuregulin UniProtKB/TrEMBL
NCBI Gene NRG3 ENTREZGENE
PANTHER PRO-NEUREGULIN-3, MEMBRANE-BOUND ISOFORM UniProtKB/TrEMBL
  PTHR11100 UniProtKB/TrEMBL
PROSITE EGF_1 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
Superfamily-SCOP EGF/Laminin UniProtKB/TrEMBL
UniProt A0A2R9AUK1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AUM5_PANPA UniProtKB/TrEMBL
  A0A2R9AUW7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AYU2_PANPA UniProtKB/TrEMBL
  A0A2R9B0T7_PANPA UniProtKB/TrEMBL