XK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | X | 33,544,731 - 33,602,574 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 33,544,287 - 33,602,576 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 37,205,690 - 37,263,628 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
XK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | X | 37,685,791 - 37,732,130 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 37,685,791 - 37,732,130 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 37,545,044 - 37,591,383 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 37,430,052 - 37,476,322 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 37,301,324 - 37,347,594 | NCBI | | | | | Celera | X | 41,682,795 - 41,729,061 (+) | NCBI | | Celera | | | Cytogenetic Map | X | p21.1 | NCBI | | | | | HuRef | X | 35,290,888 - 35,336,107 (+) | NCBI | | HuRef | | | CHM1_1 | X | 37,576,264 - 37,622,522 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 37,089,348 - 37,135,703 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Xk (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | X | 9,139,023 - 9,179,484 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 9,138,995 - 9,179,489 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 9,272,784 - 9,313,245 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 9,272,756 - 9,313,250 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 8,849,910 - 8,890,371 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 8,429,873 - 8,468,132 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 7,012,285 - 7,052,336 (+) | NCBI | | Celera | | | Cytogenetic Map | X | A1.1 | NCBI | | | | | cM Map | X | 4.22 | NCBI | | | | |
|
Xk (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | X | 16,108,913 - 16,145,322 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 13,436,412 - 13,472,830 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 13,436,418 - 13,472,830 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 13,623,720 - 13,660,104 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 17,120,655 - 17,157,035 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 13,377,235 - 13,413,615 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 14,497,376 - 14,534,479 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 14,498,119 - 14,534,473 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 15,278,669 - 15,315,169 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 25,591,152 - 25,624,913 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 25,644,621 - 25,678,382 (-) | NCBI | | | | | Celera | X | 13,951,523 - 13,985,552 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q12 | NCBI | | | | |
|
Xk (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955587 | 668,070 - 728,959 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955587 | 668,871 - 725,829 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
XK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | X | 39,334,500 - 39,381,063 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 39,337,936 - 39,384,437 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 30,136,046 - 30,182,541 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 37,846,539 - 37,892,348 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 37,846,539 - 37,892,348 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
XK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | X | 32,453,404 - 32,498,145 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 32,453,570 - 32,495,110 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 19,801,126 - 19,845,752 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 32,491,214 - 32,543,437 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 32,491,295 - 32,540,402 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 32,578,961 - 32,624,840 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 32,544,040 - 32,588,642 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 32,592,018 - 32,636,881 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Xk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | X | 24,691,389 - 24,745,510 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936502 | 4,532,100 - 4,587,439 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936502 | 4,532,100 - 4,584,931 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
XK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Vero_WHO_p1.0 | NW_023666056 | 38,148,973 - 38,193,937 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Xk (Heterocephalus glaber - naked mole-rat) |
|