Symbol:
CHCHD2
Name:
coiled-coil-helix-coiled-coil-helix domain containing 2
RGD ID:
14212718
Description:
ENCODES a protein that exhibits DNA-binding transcription factor binding (inferred); sequence-specific DNA binding (inferred); INVOLVED IN cellular response to oxidative stress (inferred); mitochondrion organization (inferred); positive regulation of mitochondrial ATP synthesis coupled electron transport (inferred); ASSOCIATED WITH amelogenesis imperfecta (ortholog); autistic disorder (ortholog); Parkinson's disease 22 (ortholog); FOUND IN mitochondrial intermembrane space (inferred); mitochondrion (inferred); nucleus (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
coiled-coil-helix-coiled-coil-helix domain-containing protein 2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 16,812,404 - 16,819,124 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 16,812,409 - 16,819,130 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 17,065,147 - 17,071,876 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
JBrowse:
View Region in Genome Browser (JBrowse)
Model
CHCHD2 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 16,812,404 - 16,819,124 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 16,812,409 - 16,819,130 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 17,065,147 - 17,071,876 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CHCHD2 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 56,101,573 - 56,106,476 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 56,094,567 - 56,106,479 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 56,169,266 - 56,174,169 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 56,136,760 - 56,141,681 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 7 55,943,476 - 55,948,396 NCBI Celera 7 67,222,175 - 67,227,096 (-) NCBI Celera Cytogenetic Map 7 p11.2 NCBI HuRef 7 55,983,486 - 55,988,171 (-) NCBI HuRef CHM1_1 7 56,172,294 - 56,177,215 (-) NCBI CHM1_1 T2T-CHM13v2.0 7 56,261,388 - 56,266,291 (-) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 56,173,513 - 56,178,434 (-) NCBI
Chchd2 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 129,910,002 - 129,916,311 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 129,909,997 - 129,916,311 (-) Ensembl GRCm39 Ensembl GRCm38 5 129,881,161 - 129,887,470 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 129,881,156 - 129,887,470 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 130,357,032 - 130,363,340 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 130,165,865 - 130,172,173 (-) NCBI MGSCv36 mm8 Celera 5 126,880,556 - 126,886,855 (-) NCBI Celera Cytogenetic Map 5 G1.3 NCBI cM Map 5 68.26 NCBI
Chchd2l3 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 9 101,947,769 - 101,948,440 (-) NCBI GRCr8 mRatBN7.2 9 94,500,439 - 94,501,110 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 9 94,500,432 - 94,501,128 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 9 102,935,898 - 102,936,569 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 9 108,071,025 - 108,071,696 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 9 106,427,988 - 106,428,659 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 9 101,388,148 - 101,388,819 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 9 101,018,487 - 101,019,158 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Rnor_5.0 9 101,018,677 - 101,019,134 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 9 27,858,760 - 28,053,369 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.4 9 93,253,912 - 93,254,617 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 9 93,460,637 - 93,461,304 (-) NCBI Celera 9 92,034,380 - 92,035,051 (-) NCBI Celera Cytogenetic Map 9 q36 NCBI
Chchd2 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955456 8,255,898 - 8,265,488 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955456 8,260,533 - 8,265,488 (-) NCBI ChiLan1.0 ChiLan1.0
CHCHD2 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 60,953,733 - 60,958,902 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 109,278,455 - 109,283,547 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 56,714,583 - 56,719,640 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 57,136,723 - 57,141,765 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 57,134,303 - 57,141,765 (-) Ensembl panpan1.1 panPan2
CHCHD2 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 581,276 - 585,367 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 581,280 - 585,301 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 2,280,745 - 2,284,839 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 385,111 - 389,203 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 385,115 - 389,137 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 328,861 - 332,963 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 322,956 - 327,041 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 494,144 - 498,243 (-) NCBI UU_Cfam_GSD_1.0
Chchd2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409344 126,172,517 - 126,175,918 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936543 7,860,448 - 7,863,983 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936543 7,860,432 - 7,864,050 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CHCHD2 (Chlorocebus sabaeus - green monkey)
Chchd2 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
10
4
23
3
2
5
14
12
23
3
6
3
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSSSCT00000008489 ⟹ ENSSSCP00000008270
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 3 16,812,404 - 16,819,124 (+) Ensembl
RefSeq Acc Id:
XM_003124448 ⟹ XP_003124496
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 3 16,812,409 - 16,819,130 (+) NCBI
Sequence:
CGTCGGCGAACGGAAGGCCTGAGAGCTGATTGGTTGCGCGCTGAGGCCGGCCCCGCCTTCCGACTTCCGCTGTCGGTCTCTGCAGAAGCCGCCAGGGTCTCCTCTGAGTTTCTCTGTCTTCTAGGTTC GCGTTCGTTGCGCAGTTACGATGCCTCGTGGAAGCCGAAGCCGCACTTCCCGCATGGCCCCTCCGGCTAGCCGGGCACCTCAGATGAGAGCTGCACCCAGGCCAGCGCCGGCAGCTCAGCCACCAGCA GCAGCTCCACCATCTGCTGTTGGCTCCCCTGCTGCTGCACCTCGGCAGCCAGGTCTCATGGCCCAGATGGCAACCACTGCAGCCGGCGTGGCTGTGGGTTCTGCCGTCGGCCACACGATAGGTCATGC GATCACTGGGGGCTTCGGTGGAGGAAGTAGTGCTGAGCCCTCAAGGCCTGACATCACTTACCAGGAGCCTCAGGGAGCCCAGCCAGCACAGCAGCAGCAGATGGCCCCATGCTTCTATGAGGTGAAAC AGTTTTTGGAGTGTGCCCAGAACCAGGGTGACCTTAAGCTTTGTGAGGGTTTCAGCGAGGTGCTGAAACAATGCAGACTGGCAAATGGATTATCTTAATCAAGAAGCTCCACTGAAGACATGAAAAAT CACCCTCCATGACCTGGTTGATTTAGCATAAAAATGTGATTGATCATGAAGATATAAAGTGTGAAATCAAGATTAAACCTCTCCTCTATCACTAATAGCTTTCGTGCTTCAGAATTGCAGTGGAGGAG GGTATTCTTCTGATGTGGAAGCTCATTGAGTATTGAGTTTGGAGCTGGGCAGATGTTTATGTGGCCTCTGAAACATGCTTTTCTGATGTTATTGATTGTGAATTAATTAGAATAAAGAGATTTTCTTT CAAAA
hide sequence
RefSeq Acc Id:
XP_003124496 ⟸ XM_003124448
- UniProtKB:
F1RIU9 (UniProtKB/TrEMBL), A0A4X1SZD7 (UniProtKB/TrEMBL), A0A8D1IU36 (UniProtKB/TrEMBL)
- Sequence:
MPRGSRSRTSRMAPPASRAPQMRAAPRPAPAAQPPAAAPPSAVGSPAAAPRQPGLMAQMATTAAGVAVGSAVGHTIGHAITGGFGGGSSAEPSRPDITYQEPQGAQPAQQQQMAPCFYEVKQFLECAQ NQGDLKLCEGFSEVLKQCRLANGLS
hide sequence
Ensembl Acc Id:
ENSSSCP00000008270 ⟸ ENSSSCT00000008489