SYBU (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 27,901,097 - 27,974,660 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 27,899,264 - 27,975,389 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 30,103,738 - 30,217,060 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SYBU (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 8 | 109,573,978 - 109,691,600 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 109,573,978 - 109,691,791 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 110,586,207 - 110,703,829 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 110,655,581 - 110,773,196 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 8 | 106,773,801 - 106,891,437 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q23.2 | NCBI | | | | | HuRef | 8 | 105,908,387 - 106,025,974 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 110,626,649 - 110,744,269 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 110,702,563 - 110,820,184 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sybu (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 15 | 44,535,252 - 44,651,466 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 44,535,252 - 44,651,459 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 44,671,856 - 44,788,070 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 44,671,856 - 44,788,063 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 44,503,402 - 44,619,609 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 44,501,930 - 44,618,137 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 45,123,907 - 45,239,526 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | B3.2 | NCBI | | | | | cM Map | 15 | 16.91 | NCBI | | | | |
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Sybu (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 77,731,662 - 77,833,413 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 75,847,000 - 75,948,919 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 75,847,003 - 75,948,828 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 7 | 83,600,614 - 83,670,121 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 83,600,617 - 83,670,356 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 83,615,445 - 83,685,901 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 80,551,448 - 80,636,458 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 7 | 72,816,778 - 72,887,484 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q31 | NCBI | | | | |
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Sybu (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955417 | 16,971,394 - 17,036,940 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955417 | 16,971,394 - 17,036,925 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SYBU (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 126,948,878 - 127,066,430 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 102,469,864 - 102,587,403 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 106,223,046 - 106,340,418 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 108,368,117 - 108,436,570 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 108,368,117 - 108,483,927 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SYBU (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 13 | 10,110,183 - 10,179,514 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 10,111,091 - 10,180,056 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 10,100,830 - 10,209,568 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 10,391,898 - 10,465,693 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 10,391,905 - 10,501,668 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 10,133,302 - 10,242,126 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 10,250,505 - 10,324,527 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 10,340,031 - 10,448,908 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sybu (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 27,906,164 - 28,012,831 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 35,332,452 - 35,438,204 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 35,332,243 - 35,439,095 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SYBU (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 104,274,092 - 104,390,051 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 104,273,217 - 104,344,348 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 36,184,560 - 36,300,374 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sybu (Heterocephalus glaber - naked mole-rat) |
|