OCIAD2 (OCIA domain containing 2)

Gene: OCIAD2 (OCIA domain containing 2) Sus scrofa

Analyze

Symbol:

OCIAD2

Name:

OCIA domain containing 2

RGD ID:

14162702

Description:

INVOLVED IN response to bacterium (ortholog); FOUND IN endosome (inferred); mitochondrial inner membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

OCIA domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	OCIAD2 (OCIA domain containing 2)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ociad2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ociad2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ociad2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	OCIAD2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	OCIAD2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ociad2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	OCIAD2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ociad2 (OCIA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	38,772,714 - 38,793,216 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	38,771,281 - 38,793,511 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	40,880,338 - 41,028,600 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

response to bacterium (IEA,ISO)

Cellular Component

endosome (IEA)

mitochondrial inner membrane (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

OCIAD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	38,772,714 - 38,793,216 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	38,771,281 - 38,793,511 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	40,880,338 - 41,028,600 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OCIAD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	48,885,019 - 48,906,828 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	48,885,019 - 48,906,937 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	48,887,036 - 48,908,845 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	48,582,162 - 48,603,572 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	48,728,334 - 48,749,733	NCBI
Celera	4	49,335,798 - 49,357,208 (-)	NCBI		Celera
Cytogenetic Map	4	p11	NCBI
HuRef	4	48,207,197 - 48,228,623 (-)	NCBI		HuRef
CHM1_1	4	48,886,556 - 48,907,964 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	48,851,611 - 48,873,422 (-)	NCBI		T2T-CHM13v2.0

Ociad2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	73,479,541 - 73,496,290 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	73,479,542 - 73,498,371 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	73,322,198 - 73,338,947 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	73,322,199 - 73,341,028 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	73,713,438 - 73,729,878 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	73,601,927 - 73,617,696 (-)	NCBI		MGSCv36	mm8
Celera	5	70,576,762 - 70,593,183 (-)	NCBI		Celera
Cytogenetic Map	5	C3.3	NCBI
cM Map	5	38.54	NCBI

Ociad2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	35,225,291 - 35,243,306 (+)	NCBI		GRCr8
mRatBN7.2	14	34,873,668 - 34,889,276 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	34,873,820 - 34,889,265 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	35,238,220 - 35,253,634 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	36,542,977 - 36,558,393 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	35,031,301 - 35,046,715 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	37,432,999 - 37,449,425 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	37,435,654 - 37,444,775 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	37,251,451 - 37,267,486 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	37,273,819 - 37,292,695 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	14	34,131,808 - 34,147,246 (+)	NCBI		Celera
Cytogenetic Map	14	p11	NCBI

Ociad2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955447	18,820,368 - 18,834,886 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955447	18,822,253 - 18,834,886 (+)	NCBI	ChiLan1.0	ChiLan1.0

OCIAD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	78,959,034 - 78,980,759 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	79,220,679 - 79,242,403 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	73,247,989 - 73,269,749 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	83,977,124 - 83,998,682 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	83,977,152 - 83,998,674 (+)	Ensembl	panpan1.1		panPan2

OCIAD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	44,639,044 - 44,653,481 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	44,641,089 - 44,663,295 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	44,593,454 - 44,609,072 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	45,243,748 - 45,259,372 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	45,241,753 - 45,259,348 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	44,919,214 - 44,934,855 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	44,453,866 - 44,469,480 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	45,333,187 - 45,348,796 (-)	NCBI		UU_Cfam_GSD_1.0

Ociad2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	31,463,363 - 31,483,293 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936482	14,815,570 - 14,834,263 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936482	14,817,008 - 14,834,454 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OCIAD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	1,361,361 - 1,378,234 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	1,361,261 - 1,378,229 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	47,348,028 - 47,364,890 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ociad2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624761	18,119,184 - 18,135,269 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624761	18,119,769 - 18,135,269 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in OCIAD2
653 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2		3			13	2
Low	7	1		3	2	10		3
Below cutoff	1	3		2					1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005666640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005666641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013978666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK392279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK399871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01051192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000009663 ⟹ ENSSSCP00000009414

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	38,772,714 - 38,793,216 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000044688 ⟹ ENSSSCP00000050192

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	38,773,484 - 38,793,205 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000047151 ⟹ ENSSSCP00000043035

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	38,760,979 - 38,793,203 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000059117 ⟹ ENSSSCP00000057507

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	38,732,820 - 38,793,234 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000068846 ⟹ ENSSSCP00000069802

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	38,760,979 - 38,793,203 (-)	Ensembl

RefSeq Acc Id:

XM_005666640 ⟹ XP_005666697

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	38,771,281 - 38,793,370 (-)	NCBI

Sequence:

show sequence

GGGACAGGTGAGGGCTCGGAAGCCAGCGCAGTAAGGGGACCGTGGACCATGGGATAGGGGCAGG
GGGTGGGGAGCGGGGGCGGCGGGTCGCGAGGGACGGGGGCGGGAACCCGGGAGGCGGGCTTCAG
GGGGCGGGAGCATCCGGTCTGCAGCTGCCGCCGCGCAGTGAGATAAGCTTGGTTTGGCTGAGGA
GACGCGGCCTGCTAGGTGGTCCTCAGACCCGCAGACGTTGGGTCAACAAGGAAACTGAGTCCAC
TTGACCAGAAGAGAATCGAAGACAAAGTCACCATGGCTGCAGTATCTACTGATGGAAACCAAGA
CAAAGCTCCCCATTTGCCACCACTTAGCAAGCAGAGTCTGTTGTTTTGTCCAAAATCAAAGCTG
CACATCCACAGAGCAGAGATTTCAAAGATAATCCGGGAATGTCAAGAGGAAAGTTTCTGGAAGA
GAGCTCTGCCTTTTTCTCTTGTAAGCATGCTTATCACCCAAGGGCTGGTCCACCAAGGTTATTT
GGCAGCTAACCCGAGGTTTGGATCATTGCCTAAAGTTGCACTTGCTGGTATCTTGGGATTTGGC
CTTGGAAAGGCATCATACATAAGAGTGTGCCAGAGTAAATTCCATTCCTTTGAAGGTCAGCTGC
GTGGTGCTGGTTTTGGTCCAGGGCATAACAGGCACTGCCTGCTTACCTGTGAGGAATGTAAAAT
AAAGCATGGATTAAGTGAGGAGGGAAGTTCACAGCCCTCAGCTTCCTAAATACTGTCTATGGGC
TTTGAAGTTTCTAAAAATCTCTGAATTTTTACACCTCTAAAATGTCAAGTATTCTTTAAAATAA
TATACTTATAATGGAACAGAAACATTGTGATTCTCTCTCCTGAAATGCTTTCCTGTTGATTCTC
AATTGATCATTACATGTTTTTCTGCTATTTAAGACTATCTTGGGAATATTCACACACCAAAAGA
AATCATGTTGCAGTTTAACTTGCTTACAGCTAAGTAAAAGAATTTAATTAAAAAGATGTGGTGC
ATATACACGGTGGAATACTACTCAGCCATAAAAAAGAATGAAAGAATGCCATTTGCAGCAACAT
GGATGCAACTAGAGATTCTCATACTGAGTGAAGTAGTTCAGAATGAGAAAGACAAATACCATTA
TTTGTGAAATCTAATATATGGCACAAATGAACCTATCTATAGAACAGAAGCAGACTCAGACATG
GAGAAGAGACTTGTGGTTGCCAAGGGGAAGGGGGAGGAAGTGGGATGGGCTGGGAGTTTGAGAT
TAGTAGATGCATACTGTTACATTTAGAGTGGCTAAGCAATGAGGTCCTATTGTACAGCACGGGG
AACTATACCCAATCCCTTGTGATAGAACATAATGGAAGATAATATGAGGAAAAGAATGTGTATA
TATGTACAACCGGGTCACTTTGCTCTACAGCAGAAATTGACACAATGTTGTACATCGACTGCGC
TTTAATAAAAAATTGAAAAAGAATTTAGAGTCTTCTTTTATCCATCCATTCCCCCCAGCCATTC
TTTCATTCTGTTTTTGTTCAGGTTTTAAGATCTCAGATAGAAGACAGGAATGAATGTCGAGAAA
CTTGGGAAGTCATGCCTCGAGGAAAACCAACACGTATGGAGGTTAAAATACAAAGCGAGAAAGA
TTGCGTCTATGACAAGTGCTTTCTAAAACATAGGGGCCAACATTTTTGAACCTAATGAAAGGTA
TTTCACTTGAAGGAGTCACAGTATGAATCATGTCCTCTTGGTGATCCGGGTGACTGGCTTATCA
GTATGGTAAAGTTTTAGAAAAACCCGTAGTTTTAGGTTATGTGCTTAGCTAATGGGTACATGCT
CATGGTCAGCACTCAGGAACTGGGTTCTTTTATATTCTGCTGGTGGCCTGAAAGAATAAACAGC
TTCCCAAAACGTCCCTCCTCCCAAGGAACAGTTTACATACTTCTGGAAGGAATCACTGGAAGAA
TTAATCAGAGAATGGTAGATAGAGCTCAGGGCTCCAAGTGAGCTCGAAGCAGCCAATCCAACCC
CAAGCGTTGAATTCCTAGTCTCCTGCTAGGTTTTTGGAATGAAAACAAATTCTGCCACTGGGGA
CATTTCATCTTGTGACACGTTGTCTGAGCCCTATCTGAAAACGTCTCTTGCATCTTTGCATTTT
CTCAGGAAAATGCTTTAGATATGTGTCACCACTTTTATACACACACACACACAAATACATATAC
GTGTCGCAGACACGGCTCAGATCCTGTGTTGCTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCT
CCAATTGGGCCCCTAGCCTGGGAACCTCTGTGTGCCGTGGGTGCGGCCCTAAAAGGCAAAAAAA
AAAAAAAAAATCAGCATCTCAGTAGTGGGAAAAGATGAAGCTATTACTGTTGAAAAGGGAACAC
TGTTTTTATTGCTGACAGCTTCATAGTCCTTCTGACTTCCACTGGGTTTATGGTTTGTGCTCTG
ATCTTCCTAAGTGGATAAGTTTTTTATTGAAGTAGTTTATCACAGTGATCTTAATGTGAAAGAA
AATCAATAAAGAAAAAAAAAGCTGCAATGTCATCCAAGAAATCTTGAAGAGTTTGCTGCATTAT
CTGTTGTATATATCAGGAAGCAGGGTTTTGCAGGAAGACATTAAAGGAGCAACATTGGTCTGTT
AGCATTTAGCAGTTGCCAGCAGTCATCACCAAGGTGGTCCTAAGTGCATAAGAAAGAGTACTTT
CATGATAAAAAAAAAAAAAGCCAGGTGGCACTCAGCACTGCCCAGAAATTGTGACTAGATTAGA
TTTTTTAGGTAGTTTTATTTTCCATTTTACCGCAGGTAACAGTTTTGCTAAGCTCTACTACACA
GTCTCTTCCAATAACATTTTCCTTTCCTGTATTCCCT

hide sequence

RefSeq Acc Id:

XM_005666641 ⟹ XP_005666698

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	38,771,281 - 38,793,511 (-)	NCBI

Sequence:

show sequence

GTGTGGGTGCGATGCCACCAACAGAGAAGGGGACTGCAAGGTGGGGGATGGGATGCACTTGTAG
AGTGACTCACTCGAGTGAGCAAGGCGCTGCAGGCGGAGCAAGAGGAGGACGAGGCAGAACGGAG
CCGGCGCTCGTGCGGGACAGACGTTGGGTCAACAAGGAAACTGAGTCCACTTGACCAGAAGAGA
ATCGAAGACAAAGTCACCATGGCTGCAGTATCTACTGATGGAAACCAAGACAAAGCTCCCCATT
TGCCACCACTTAGCAAGCAGAGTCTGTTGTTTTGTCCAAAATCAAAGCTGCACATCCACAGAGC
AGAGATTTCAAAGATAATCCGGGAATGTCAAGAGGAAAGTTTCTGGAAGAGAGCTCTGCCTTTT
TCTCTTGTAAGCATGCTTATCACCCAAGGGCTGGTCCACCAAGGTTATTTGGCAGCTAACCCGA
GGTTTGGATCATTGCCTAAAGTTGCACTTGCTGGTATCTTGGGATTTGGCCTTGGAAAGGCATC
ATACATAAGAGTGTGCCAGAGTAAATTCCATTCCTTTGAAGGTCAGCTGCGTGGTGCTGGTTTT
GGTCCAGGGCATAACAGGCACTGCCTGCTTACCTGTGAGGAATGTAAAATAAAGCATGGATTAA
GTGAGGAGGGAAGTTCACAGCCCTCAGCTTCCTAAATACTGTCTATGGGCTTTGAAGTTTCTAA
AAATCTCTGAATTTTTACACCTCTAAAATGTCAAGTATTCTTTAAAATAATATACTTATAATGG
AACAGAAACATTGTGATTCTCTCTCCTGAAATGCTTTCCTGTTGATTCTCAATTGATCATTACA
TGTTTTTCTGCTATTTAAGACTATCTTGGGAATATTCACACACCAAAAGAAATCATGTTGCAGT
TTAACTTGCTTACAGCTAAGTAAAAGAATTTAATTAAAAAGATGTGGTGCATATACACGGTGGA
ATACTACTCAGCCATAAAAAAGAATGAAAGAATGCCATTTGCAGCAACATGGATGCAACTAGAG
ATTCTCATACTGAGTGAAGTAGTTCAGAATGAGAAAGACAAATACCATTATTTGTGAAATCTAA
TATATGGCACAAATGAACCTATCTATAGAACAGAAGCAGACTCAGACATGGAGAAGAGACTTGT
GGTTGCCAAGGGGAAGGGGGAGGAAGTGGGATGGGCTGGGAGTTTGAGATTAGTAGATGCATAC
TGTTACATTTAGAGTGGCTAAGCAATGAGGTCCTATTGTACAGCACGGGGAACTATACCCAATC
CCTTGTGATAGAACATAATGGAAGATAATATGAGGAAAAGAATGTGTATATATGTACAACCGGG
TCACTTTGCTCTACAGCAGAAATTGACACAATGTTGTACATCGACTGCGCTTTAATAAAAAATT
GAAAAAGAATTTAGAGTCTTCTTTTATCCATCCATTCCCCCCAGCCATTCTTTCATTCTGTTTT
TGTTCAGGTTTTAAGATCTCAGATAGAAGACAGGAATGAATGTCGAGAAACTTGGGAAGTCATG
CCTCGAGGAAAACCAACACGTATGGAGGTTAAAATACAAAGCGAGAAAGATTGCGTCTATGACA
AGTGCTTTCTAAAACATAGGGGCCAACATTTTTGAACCTAATGAAAGGTATTTCACTTGAAGGA
GTCACAGTATGAATCATGTCCTCTTGGTGATCCGGGTGACTGGCTTATCAGTATGGTAAAGTTT
TAGAAAAACCCGTAGTTTTAGGTTATGTGCTTAGCTAATGGGTACATGCTCATGGTCAGCACTC
AGGAACTGGGTTCTTTTATATTCTGCTGGTGGCCTGAAAGAATAAACAGCTTCCCAAAACGTCC
CTCCTCCCAAGGAACAGTTTACATACTTCTGGAAGGAATCACTGGAAGAATTAATCAGAGAATG
GTAGATAGAGCTCAGGGCTCCAAGTGAGCTCGAAGCAGCCAATCCAACCCCAAGCGTTGAATTC
CTAGTCTCCTGCTAGGTTTTTGGAATGAAAACAAATTCTGCCACTGGGGACATTTCATCTTGTG
ACACGTTGTCTGAGCCCTATCTGAAAACGTCTCTTGCATCTTTGCATTTTCTCAGGAAAATGCT
TTAGATATGTGTCACCACTTTTATACACACACACACACAAATACATATACGTGTCGCAGACACG
GCTCAGATCCTGTGTTGCTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCTCCAATTGGGCCCCT
AGCCTGGGAACCTCTGTGTGCCGTGGGTGCGGCCCTAAAAGGCAAAAAAAAAAAAAAAAATCAG
CATCTCAGTAGTGGGAAAAGATGAAGCTATTACTGTTGAAAAGGGAACACTGTTTTTATTGCTG
ACAGCTTCATAGTCCTTCTGACTTCCACTGGGTTTATGGTTTGTGCTCTGATCTTCCTAAGTGG
ATAAGTTTTTTATTGAAGTAGTTTATCACAGTGATCTTAATGTGAAAGAAAATCAATAAAGAAA
AAAAAAGCTGCAATGTCATCCAAGAAATCTTGAAGAGTTTGCTGCATTATCTGTTGTATATATC
AGGAAGCAGGGTTTTGCAGGAAGACATTAAAGGAGCAACATTGGTCTGTTAGCATTTAGCAGTT
GCCAGCAGTCATCACCAAGGTGGTCCTAAGTGCATAAGAAAGAGTACTTTCATGATAAAAAAAA
AAAAAGCCAGGTGGCACTCAGCACTGCCCAGAAATTGTGACTAGATTAGATTTTTTAGGTAGTT
TTATTTTCCATTTTACCGCAGGTAACAGTTTTGCTAAGCTCTACTACACAGTCTCTTCCAATAA
CATTTTCCTTTCCTGTATTCCCT

hide sequence

RefSeq Acc Id:

XM_013978666 ⟹ XP_013834120

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	38,773,073 - 38,789,709 (-)	NCBI

Sequence:

show sequence

ACGTTGGGTCAACAAGGAAACTGAGTCCACTTGACCAGAAGAGAATCGAAGACAAAGTCACCAT
GGCTGCAGTATCTACTGATGGAAACCAAGACAAAGCTCCCCATTTGCCACCACTTAGCAAGCAG
CTCTGCCTTTTTCTCTTGTAAGCATGCTTATCACCCAAGGGCTGGTCCACCAAGGTTATTTGGC
AGCTAACCCGAGGTTTGGATCATTGCCTAAAGTTGCACTTGCTGGTATCTTGGGATTTGGCCTT
GGAAAGGCATCATACATAAGAGTGTGCCAGAGTAAATTCCATTCCTTTGAAGGTCAGCTGCGTG
GTGCTGGTTTTGGTCCAGGGCATAACAGGCACTGCCTGCTTACCTGTGAGGAATGTAAAATAAA
GCATGGATTAAGTGAGGAGGGAAGTTCACAGCCCTCAGCTTCCTAAATACTGTCTATGGGCTTT
GAAGTTTCTAAAAATCTCTGAATTTTTACACCTCTAAAATGTCAAGTATTCTTTAAAATAATAT
ACTTATAATGGAACAGAAACATTGTGATTCTCTCTCCTGAAATGCTTTCCTGTTGATTCTCAAT
TGATCATTACATGTTTTTCTGCTATTTAAGACTATCTTGGGAATATTCACACACCAAAAGAAAT
CATGTTGCAGTTTAACTTGCTTACAGCTAAGTAAAAGAATTTAATTAAAAAGATGTGGTGCATA
TACACGGTGGAATACTACTCAGCCATAAAAAAGAATGAAAGAATGCCATTTGCAGCAACATGGA
TGCAACTAGAGATTCTCATACTGAGTGAAGTAGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005666697	(Get FASTA)	NCBI Sequence Viewer
	XP_005666698	(Get FASTA)	NCBI Sequence Viewer
	XP_013834120	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000009414
	ENSSSCP00000009414.3
	ENSSSCP00035018063.1
	ENSSSCP00045044181.1
	ENSSSCP00045044328.1
	ENSSSCP00060022039.1
	ENSSSCP00060022045.1

RefSeq Acc Id:	XP_005666698 ⟸ XM_005666641
- Peptide Label:	isoform X1
- UniProtKB:	F1SE82 (UniProtKB/TrEMBL), A0A8D1J8Y0 (UniProtKB/TrEMBL), A0A8D2BIM8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAVSTDGNQDKAPHLPPLSKQSLLFCPKSKLHIHRAEISKIIRECQEESFWKRALPFSLVSML ITQGLVHQGYLAANPRFGSLPKVALAGILGFGLGKASYIRVCQSKFHSFEGQLRGAGFGPGHNR HCLLTCEECKIKHGLSEEGSSQPSAS hide sequence

RefSeq Acc Id:	XP_005666697 ⟸ XM_005666640
- Peptide Label:	isoform X1
- UniProtKB:	F1SE82 (UniProtKB/TrEMBL), A0A8D1J8Y0 (UniProtKB/TrEMBL), A0A8D2BIM8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAVSTDGNQDKAPHLPPLSKQSLLFCPKSKLHIHRAEISKIIRECQEESFWKRALPFSLVSML ITQGLVHQGYLAANPRFGSLPKVALAGILGFGLGKASYIRVCQSKFHSFEGQLRGAGFGPGHNR HCLLTCEECKIKHGLSEEGSSQPSAS hide sequence

RefSeq Acc Id:	XP_013834120 ⟸ XM_013978666
- Peptide Label:	isoform X2
- Sequence:	show sequence MLITQGLVHQGYLAANPRFGSLPKVALAGILGFGLGKASYIRVCQSKFHSFEGQLRGAGFGPGH NRHCLLTCEECKIKHGLSEEGSSQPSAS hide sequence

RefSeq Acc Id:

ENSSSCP00000009414 ⟸ ENSSSCT00000009663

RefSeq Acc Id:

ENSSSCP00000050192 ⟸ ENSSSCT00000044688

RefSeq Acc Id:

ENSSSCP00000069802 ⟸ ENSSSCT00000068846

RefSeq Acc Id:

ENSSSCP00000057507 ⟸ ENSSSCT00000059117

RefSeq Acc Id:

ENSSSCP00000043035 ⟸ ENSSSCT00000047151

Protein Domains

OCIA

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000008829	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00035034057	UniProtKB/TrEMBL
	ENSSSCG00045036355	UniProtKB/TrEMBL
	ENSSSCG00060038298	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000009663	ENTREZGENE
	ENSSSCT00000009663.4	UniProtKB/TrEMBL
	ENSSSCT00035045137.1	UniProtKB/TrEMBL
	ENSSSCT00045062702.1	UniProtKB/TrEMBL
	ENSSSCT00045062900.1	UniProtKB/TrEMBL
	ENSSSCT00060051774.1	UniProtKB/TrEMBL
	ENSSSCT00060051784.1	UniProtKB/TrEMBL
InterPro	OCAD1/2	UniProtKB/TrEMBL
	OCIA_dom	UniProtKB/TrEMBL
KEGG Report	ssc:100738638	UniProtKB/TrEMBL
NCBI Gene	OCIAD2	ENTREZGENE
PANTHER	OCIA DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
	PTHR13336	UniProtKB/TrEMBL
Pfam	OCIA	UniProtKB/TrEMBL
UniProt	A0A8D1J8Y0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D2BIM8	ENTREZGENE, UniProtKB/TrEMBL
	F1SE82	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:91012	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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